Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_P18
(911 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 33 0.20
At1g61080.1 68414.m06877 proline-rich family protein 33 0.26
At3g50580.1 68416.m05532 proline-rich family protein contains pr... 32 0.61
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 31 1.1
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 31 1.1
At1g59910.1 68414.m06749 formin homology 2 domain-containing pro... 31 1.4
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 30 1.9
At3g19320.1 68416.m02450 leucine-rich repeat family protein cont... 27 2.3
At5g07760.1 68418.m00888 formin homology 2 domain-containing pro... 30 2.4
At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identica... 29 4.3
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 29 4.3
At1g54215.1 68414.m06180 proline-rich family protein contains pr... 29 4.3
At4g15200.1 68417.m02329 formin homology 2 domain-containing pro... 29 5.7
At1g73090.1 68414.m08451 expressed protein 28 7.5
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 28 7.5
At5g26080.1 68418.m03103 proline-rich family protein contains pr... 28 9.9
At3g24480.1 68416.m03070 leucine-rich repeat family protein / ex... 28 9.9
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 28 9.9
At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP1... 28 9.9
At1g62500.1 68414.m07052 protease inhibitor/seed storage/lipid t... 28 9.9
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 33.5 bits (73), Expect = 0.20
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +2
Query: 614 PPXXTXXXXXXKPR*PPPXXXPXLLXPPXPXGKVVXPVXFPGXXXNXPAPPP 769
PP + P PPP P PP P PV P P PPP
Sbjct: 426 PPPPSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPP 477
Score = 31.9 bits (69), Expect = 0.61
Identities = 20/73 (27%), Positives = 21/73 (28%)
Frame = +2
Query: 551 PXPPXQCPKXMXXLXNXXXXGPPXXTXXXXXXKPR*PPPXXXPXLLXPPXPXGKVVXPVX 730
P PP P PP P PPP P PP P PV
Sbjct: 451 PPPPPPPPPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPPVY 510
Query: 731 FPGXXXNXPAPPP 769
P +PPP
Sbjct: 511 SPPPPPVYSSPPP 523
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/76 (26%), Positives = 22/76 (28%), Gaps = 3/76 (3%)
Frame = +2
Query: 551 PXPPXQCPKXMXXLXNXXXXGPPXXTXXXXXXKPR*PPPXXXPXLLXPPXPXGKVVXPVX 730
P PP P + + PP P PPP P PP P P
Sbjct: 466 PPPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPVYSSPPPPP 525
Query: 731 FPG---XXXNXPAPPP 769
P P PPP
Sbjct: 526 SPAPTPVYCTRPPPPP 541
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/73 (26%), Positives = 23/73 (31%)
Frame = +2
Query: 551 PXPPXQCPKXMXXLXNXXXXGPPXXTXXXXXXKPR*PPPXXXPXLLXPPXPXGKVVXPVX 730
P PP P + + PP P PPP P + PP P P
Sbjct: 438 PPPP---PPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPPV 494
Query: 731 FPGXXXNXPAPPP 769
+ P PPP
Sbjct: 495 YSPPPPPPPPPPP 507
Score = 28.3 bits (60), Expect = 7.5
Identities = 23/87 (26%), Positives = 25/87 (28%)
Frame = +2
Query: 551 PXPPXQCPKXMXXLXNXXXXGPPXXTXXXXXXKPR*PPPXXXPXLLXPPXPXGKVVXPVX 730
P PP P PP P PPP P PP P V P
Sbjct: 455 PPPPPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPPVYSPPP 514
Query: 731 FPGXXXNXPAPPPGAHRRLLXXXXPFP 811
P + P PP A + P P
Sbjct: 515 -PPVYSSPPPPPSPAPTPVYCTRPPPP 540
Score = 28.3 bits (60), Expect = 7.5
Identities = 20/73 (27%), Positives = 21/73 (28%)
Frame = +2
Query: 551 PXPPXQCPKXMXXLXNXXXXGPPXXTXXXXXXKPR*PPPXXXPXLLXPPXPXGKVVXPVX 730
P PP P P P PPP P L PP P P
Sbjct: 545 PPPPQFSPPPPEPYYYSSPPPPHSSPPPHSPPPPHSPPPPIYPYLSPPPPPTPVSSPP-- 602
Query: 731 FPGXXXNXPAPPP 769
P + P PPP
Sbjct: 603 -PTPVYSPPPPPP 614
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 33.1 bits (72), Expect = 0.26
Identities = 28/120 (23%), Positives = 30/120 (25%), Gaps = 5/120 (4%)
Frame = +2
Query: 557 PPXQCPKXMXXLXNXXXXGPPXXTXXXXXXKPR*PPPXXXPXLLXPPXPX--GKVV---X 721
PP P L PP P PPP + PP P G
Sbjct: 492 PPPPTPPAFKPLKGSAPPPPPPPPLPTTIAAPPPPPPPPRAAVAPPPPPPPPGTAAAPPP 551
Query: 722 PVXFPGXXXNXPAPPPGAHRRLLXXXXPFPXXXXXXXXXXXXXXXXXXPXRXXPPXPPXP 901
P PG P PPP + P P PP PP P
Sbjct: 552 PPPPPGTQAAPPPPPPPPMQNRAPSPPPMPMGNSGSGGPPPPPPPMPLANGATPPPPPPP 611
>At3g50580.1 68416.m05532 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 265
Score = 31.9 bits (69), Expect = 0.61
Identities = 21/77 (27%), Positives = 22/77 (28%), Gaps = 1/77 (1%)
Frame = +2
Query: 551 PXPPXQCPKXMXXLXNXXXX-GPPXXTXXXXXXKPR*PPPXXXPXLLXPPXPXGKVVXPV 727
P PP PK PP T P+ P L PP P P
Sbjct: 88 PSPPPPAPKKSPPPPTPKKSPSPPSLTPFVPHPTPKKSPSPPPTPSLPPPAPKKSPSTPS 147
Query: 728 XFPGXXXNXPAPPPGAH 778
P P PPP H
Sbjct: 148 LPPPTPKKSPPPPPSHH 164
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = +2
Query: 650 PR*PPPXXXPXLLXPPXPXGKVVXPVXFPGXXXNXPAPPP 769
P PPP P PP P P +P P+PPP
Sbjct: 383 PPPPPPPPPPPPPPPPPPPPPPPPPYVYPSPPPPPPSPPP 422
Score = 29.5 bits (63), Expect = 3.2
Identities = 20/73 (27%), Positives = 21/73 (28%)
Frame = +2
Query: 551 PXPPXQCPKXMXXLXNXXXXGPPXXTXXXXXXKPR*PPPXXXPXLLXPPXPXGKVVXPVX 730
P PP P PP P PPP P + PP P V P
Sbjct: 380 PPPPPPPPPPPPPPPPPPPPPPPPPPPPYVYPSPP-PPPPSPPPYVYPPPPPPYVYPPPP 438
Query: 731 FPGXXXNXPAPPP 769
P P P P
Sbjct: 439 SPPYVYPPPPPSP 451
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/84 (26%), Positives = 26/84 (30%)
Frame = +2
Query: 659 PPPXXXPXLLXPPXPXGKVVXPVXFPGXXXNXPAPPPGAHRRLLXXXXPFPXXXXXXXXX 838
PPP P PP P + P+ P P PPP R + P P
Sbjct: 572 PPPPPPPP---PPLPSRSIPPPLAQPPPPRPPPPPPPPPSSRSI----PSPSAPPPPPPP 624
Query: 839 XXXXXXXXXPXRXXPPXPPXPRXP 910
+ PP PP P P
Sbjct: 625 PPSFGSTGNKRQAQPPPPPPPPPP 648
Score = 27.9 bits (59), Expect = 9.9
Identities = 20/74 (27%), Positives = 21/74 (28%), Gaps = 1/74 (1%)
Frame = +2
Query: 551 PXPPXQCPKXMXXLXNXXXXGPPXXTXXXXXXKPR*PPPXXXPXL-LXPPXPXGKVVXPV 727
P PP PK PP P PPP PP P K P
Sbjct: 681 PPPPPPPPKANISNAPKPPAPPPLPPSSTRLGAPPPPPPPPLSKTPAPPPPPLSKTPVPP 740
Query: 728 XFPGXXXNXPAPPP 769
PG + PP
Sbjct: 741 PPPGLGRGTSSGPP 754
>At1g59910.1 68414.m06749 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 929
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 1/54 (1%)
Frame = +2
Query: 614 PPXXTXXXXXXKPR*PPPXXXPXLLXPPXPXGKV-VXPVXFPGXXXNXPAPPPG 772
PP P PPP P PP P GK P P P PPG
Sbjct: 384 PPPPPPPSAAAPPPPPPPKKGPAAPPPPPPPGKKGAGPPPPPPMSKKGPPKPPG 437
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/79 (26%), Positives = 22/79 (27%), Gaps = 3/79 (3%)
Frame = +2
Query: 551 PXPPXQCPKXMXXLXNXXXXGPPXXTXXXXXXKPR*PPPXXXPX---LLXPPXPXGKVVX 721
P PP P PP PPP P + PP P
Sbjct: 545 PPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPPVHSPPPPVHSPPP 604
Query: 722 PVXFPGXXXNXPAPPPGAH 778
PV P P PPP H
Sbjct: 605 PVHSPPPPVYSPPPPPPVH 623
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/54 (31%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Frame = +2
Query: 614 PPXXTXXXXXXKPR*PPPXXXPX--LLXPPXPXGKVVXPVXFPGXXXNXPAPPP 769
PP + P PPP P + PP P PV P P PPP
Sbjct: 604 PPVHSPPPPVYSPPPPPPVHSPPPPVFSPPPPVHSPPPPVYSPPPPVYSPPPPP 657
Score = 28.7 bits (61), Expect = 5.7
Identities = 19/73 (26%), Positives = 23/73 (31%)
Frame = +2
Query: 551 PXPPXQCPKXMXXLXNXXXXGPPXXTXXXXXXKPR*PPPXXXPXLLXPPXPXGKVVXPVX 730
P PP P + + PP + P P P + PP P PV
Sbjct: 520 PPPPVYSPPPPPPVYSPPPP-PPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVH 578
Query: 731 FPGXXXNXPAPPP 769
P P PPP
Sbjct: 579 SPPPPVYSPPPPP 591
>At3g19320.1 68416.m02450 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560;
Length = 493
Score = 27.5 bits (58), Expect(2) = 2.3
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +2
Query: 650 PR*PPPXXXPXLLXPPXPXGKVVXPVXFPGXXXNXPAPPP 769
P+ PPP P L PP P + P P+PPP
Sbjct: 66 PQTPPPPPPPQSLPPPSPSPEPEHYPPPPYHHYITPSPPP 105
Score = 21.0 bits (42), Expect(2) = 2.3
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +2
Query: 866 PXRXXPPXPPXP 901
P R PP PP P
Sbjct: 105 PPRPLPPPPPPP 116
>At5g07760.1 68418.m00888 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 853
Score = 29.9 bits (64), Expect = 2.4
Identities = 24/96 (25%), Positives = 26/96 (27%)
Frame = +2
Query: 614 PPXXTXXXXXXKPR*PPPXXXPXLLXPPXPXGKVVXPVXFPGXXXNXPAPPPGAHRRLLX 793
PP P PPP PP P + P P PPP RR+L
Sbjct: 15 PPMRGRVPLPPPPPPPPPPMRRRAPLPPPPPPPMRRRAPLP------PPPPPAMRRRVLP 68
Query: 794 XXXPFPXXXXXXXXXXXXXXXXXXPXRXXPPXPPXP 901
P P R P PP P
Sbjct: 69 RPPPPPPPLPMFDAEVLCCCYPPTRVRREAPLPPPP 104
>At5g10430.1 68418.m01209 arabinogalactan-protein (AGP4) identical
to gi_3883126_gb_AAC77826
Length = 135
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 614 PPXXTXXXXXXKPR*PPPXXXPXLLXPPXPXGKVVXPVXFPGXXXNXPAP 763
PP T P P PP P G V P PG PAP
Sbjct: 61 PPAATPAPATTPPSVAPSPADVPTASPPAPEGPTVSPSSAPGPSDASPAP 110
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/76 (26%), Positives = 21/76 (27%), Gaps = 3/76 (3%)
Frame = +2
Query: 551 PXPPXQCPKXMXXLXNXXXXGPPXXTXXXXXXKPR*PPPXXX---PXLLXPPXPXGKVVX 721
P PP P PP PPP P + PP P
Sbjct: 663 PPPPMHSPPPPVYSPPPPVHSPPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPP 722
Query: 722 PVXFPGXXXNXPAPPP 769
PV P P PPP
Sbjct: 723 PVHSPPPPVQSPPPPP 738
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = +2
Query: 650 PR*PPPXXXPX--LLXPPXPXGKVVXPVXFPGXXXNXPAPPP 769
P PPP P + PP P PV P + P PPP
Sbjct: 647 PPPPPPVHSPPPPVFSPPPPMHSPPPPVYSPPPPVHSPPPPP 688
>At1g54215.1 68414.m06180 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 169
Score = 29.1 bits (62), Expect = 4.3
Identities = 21/84 (25%), Positives = 22/84 (26%)
Frame = +2
Query: 659 PPPXXXPXLLXPPXPXGKVVXPVXFPGXXXNXPAPPPGAHRRLLXXXXPFPXXXXXXXXX 838
PPP P PP P P P PPP + P P
Sbjct: 43 PPPPPPPPPPPPPPPPPPPPPPAVNMSVETGIPPPPPPVTDMIKPLSSPPPPQPPPRSQP 102
Query: 839 XXXXXXXXXPXRXXPPXPPXPRXP 910
P R PP P P P
Sbjct: 103 PPKPPQKNLP-RRHPPPPRSPEKP 125
>At4g15200.1 68417.m02329 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 600
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +2
Query: 659 PPPXXXPXLLXPPXPXGKVVXPVXFPGXXXNXPAPPPGA 775
PPP P PP P K P P PAPP GA
Sbjct: 267 PPPAAAPPPQPPPPPPPKPQPPPP-PKIARPPPAPPKGA 304
>At1g73090.1 68414.m08451 expressed protein
Length = 306
Score = 28.3 bits (60), Expect = 7.5
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +1
Query: 250 LGPGDC*EKLWHDGRQLQRI 309
+GPG C + W +GR+LQ++
Sbjct: 272 IGPGVCVGQAWQEGRELQQV 291
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 28.3 bits (60), Expect = 7.5
Identities = 23/82 (28%), Positives = 27/82 (32%)
Frame = +2
Query: 659 PPPXXXPXLLXPPXPXGKVVXPVXFPGXXXNXPAPPPGAHRRLLXXXXPFPXXXXXXXXX 838
P P P + PP P K V P PG P+PPP + P P
Sbjct: 4 PTPDPSPKPVAPPGPSSKPVAP---PGPSP-CPSPPPKPQPKPPPAPSPSP-----CPSP 54
Query: 839 XXXXXXXXXPXRXXPPXPPXPR 904
P PP PP P+
Sbjct: 55 PPKPQPKPVPPPACPPTPPKPQ 76
>At5g26080.1 68418.m03103 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 141
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +2
Query: 659 PPPXXXPXLLXPPXPXGKVVXPVXFPGXXXNXPAPPP 769
PPP P + PP P PV FP PPP
Sbjct: 44 PPPYRSPVTIPPPPPV--YSRPVAFPPPPPIYSPPPP 78
>At3g24480.1 68416.m03070 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 494
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = +2
Query: 614 PPXXTXXXXXXKPR*PPPXXXPXLLXPPXPXGKVVXPVXFPGXXXNXPAPPPGAH 778
PP P PP P PP P V P P + P PPP H
Sbjct: 411 PPPPPPSPPLPPPVYSPPPSPPVFSPPPSPP--VYSPPPPPSIHYSSPPPPPVHH 463
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 27.9 bits (59), Expect = 9.9
Identities = 20/71 (28%), Positives = 22/71 (30%)
Frame = +2
Query: 557 PPXQCPKXMXXLXNXXXXGPPXXTXXXXXXKPR*PPPXXXPXLLXPPXPXGKVVXPVXFP 736
PP PK PP T P PP P ++ PP P VV P
Sbjct: 146 PPPSTPKPPHHKPPPTPCPPPTPTPTP----PVVTPPTPTPPVITPPTPTPPVVTPPTPT 201
Query: 737 GXXXNXPAPPP 769
P P P
Sbjct: 202 PPVITPPTPTP 212
>At1g68725.1 68414.m07853 arabinogalactan-protein, putative (AGP19)
non-consensus splice site at the intron:exon boundary
(AT:exon)
Length = 247
Score = 27.9 bits (59), Expect = 9.9
Identities = 21/80 (26%), Positives = 23/80 (28%), Gaps = 2/80 (2%)
Frame = +2
Query: 551 PXPPXQCPKXMXXLXNXXXXGPPXXTXXXXXXKPR*PPPXXXPXLLXPPXPXGKVVXPVX 730
P PP P + PP T P P P P P PV
Sbjct: 98 PQPPQSPPASAPTVSPPPVSPPPAPTSPPPTPASPPPAPASPPPAPASPPPAPVSPPPVQ 157
Query: 731 FPGXXXNXPAPPPG--AHRR 784
P PAP P H+R
Sbjct: 158 APSPISLPPAPAPAPTKHKR 177
>At1g62500.1 68414.m07052 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to auxin
down regulated GB:X69640 GI:296442 from [Glycine max];
contains Pfam profile PF00234: Protease inhibitor/seed
storage/LTP family
Length = 297
Score = 27.9 bits (59), Expect = 9.9
Identities = 19/55 (34%), Positives = 21/55 (38%), Gaps = 2/55 (3%)
Frame = +2
Query: 614 PPXXTXXXXXXKPR*PPPXXXPXLLXPP--XPXGKVVXPVXFPGXXXNXPAPPPG 772
PP T P PPP P L PP P G ++ PV P PPG
Sbjct: 119 PPPITRPPIIIPPIQPPPVTTPPGLLPPITTPPG-LLPPVTTPPGLLPPVTTPPG 172
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,650,158
Number of Sequences: 28952
Number of extensions: 225215
Number of successful extensions: 1017
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2159049456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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