Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_P17
         (933 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    23   4.5  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   5.9  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   7.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   7.9  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   7.9  

>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -3

Query: 211 IVVSSKTKAFF*SSCYSF 158
           IV SSK +A   SSC SF
Sbjct: 115 IVASSKLRASLISSCLSF 132


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 9   LXXXHYREFLRFEL 50
           L   HY EF+R+EL
Sbjct: 399 LLENHYEEFVRYEL 412


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -1

Query: 348 PNPESRPKSPNPESRPKLXNPG 283
           P+P   P  P+  S P +  PG
Sbjct: 232 PHPGLSPHPPHLSSHPAIVTPG 253


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -1

Query: 348 PNPESRPKSPNPESRPKLXNPG 283
           P+P   P  P+  S P +  PG
Sbjct: 124 PHPGLSPHPPHLSSHPAIVTPG 145


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 348 PNPESRPKSPNPESRPKLXNP 286
           P P  RPKS +    P + NP
Sbjct: 267 PYPMQRPKSASLSPPPHVYNP 287


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,143
Number of Sequences: 336
Number of extensions: 1837
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26168549
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)