Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_P17
         (933 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           25   4.3  
L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7...    24   7.6  

>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 24.6 bits (51), Expect = 4.3
 Identities = 21/97 (21%), Positives = 38/97 (39%), Gaps = 2/97 (2%)
 Frame = -2

Query: 530 GGGSHQRYRXRSXGVQIRSHGVQIRXHGVQIRSHGVQI--RSHAXSYXIQSRGVQIQNRA 357
           GG +++RY  R+ G  + +        G Q+   G Q+       S  +    +     A
Sbjct: 107 GGSNYRRYMPRATGAPVNNFQYCYSTAGTQMGGPGTQMGGPGTVESQDLFGDMMPQPQPA 166

Query: 356 RSFRIRSHVQSHRTQSHDRNYXIQGCDFQSRQIRNHD 246
           R +R+R   ++ R   + R    Q      RQ R+ +
Sbjct: 167 RPYRVRRAPRAERRHPYTRRSGGQQRSAGWRQSRSDE 203


>L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7
           protein.
          Length = 192

 Score = 23.8 bits (49), Expect = 7.6
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 375 PNPESCPKLPNPESRPKSPN 316
           P P    + PN + RP+SPN
Sbjct: 100 PKPMRGRRDPNKQKRPRSPN 119


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 552,487
Number of Sequences: 2352
Number of extensions: 7834
Number of successful extensions: 21
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 101708946
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)