BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_P17
(933 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK093385-1|BAC04149.1| 192|Homo sapiens protein ( Homo sapiens ... 42 0.003
BC128134-1|AAI28135.1| 313|Homo sapiens leucine zipper protein ... 41 0.007
AL109751-2|CAC09922.1| 313|Homo sapiens leucine zipper protein ... 41 0.007
AF124430-1|AAF28870.1| 313|Homo sapiens HOM-TES-85 tumor antige... 41 0.007
BC041829-1|AAH41829.1| 300|Homo sapiens chromosome 17 open read... 33 2.0
AK074284-1|BAB85036.1| 300|Homo sapiens protein ( Homo sapiens ... 33 2.0
BC093046-1|AAH93046.1| 592|Homo sapiens signal peptide peptidas... 32 3.4
AY169315-1|AAO12540.1| 592|Homo sapiens intramembrane protease ... 32 3.4
AJ420897-1|CAD13134.1| 564|Homo sapiens SPPL2b protein protein. 32 3.4
AJ345027-1|CAC87788.1| 592|Homo sapiens presenilin-like protein... 32 3.4
AC004410-1|AAC05601.1| 398|Homo sapiens fos39554_1 protein. 32 3.4
AB040965-1|BAA96056.1| 601|Homo sapiens KIAA1532 protein protein. 32 3.4
BC017505-1|AAH17505.1| 424|Homo sapiens Unknown (protein for IM... 31 4.5
AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein. 31 4.5
BC025688-1|AAH25688.1| 377|Homo sapiens mucin 7, secreted protein. 31 6.0
>AK093385-1|BAC04149.1| 192|Homo sapiens protein ( Homo sapiens
cDNA FLJ36066 fis, clone TESTI2019257. ).
Length = 192
Score = 41.9 bits (94), Expect = 0.003
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = -1
Query: 393 NPESWCPNPESCPKLPNPESRPKSPNPESRPK 298
N S P+PES P+ P+PES P+ P+PES P+
Sbjct: 25 NSTSQQPSPESTPQQPSPESTPQQPSPESTPQ 56
Score = 31.5 bits (68), Expect = 4.5
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -1
Query: 363 SCPKLPNPESRPKSPNPESRPKLXNP 286
S + P+PES P+ P+PES P+ +P
Sbjct: 26 STSQQPSPESTPQQPSPESTPQQPSP 51
>BC128134-1|AAI28135.1| 313|Homo sapiens leucine zipper protein 4
protein.
Length = 313
Score = 40.7 bits (91), Expect = 0.007
Identities = 23/48 (47%), Positives = 27/48 (56%)
Frame = -2
Query: 521 SHQRYRXRSXGVQIRSHGVQIRXHGVQIRSHGVQIRSHAXSYXIQSRG 378
SH +Y+ RS G RSHG R HG RSHG RSH S +S+G
Sbjct: 190 SHGQYK-RSHGQSERSHGHSERSHGHSERSHGHSERSHGHSKRSRSQG 236
Score = 35.9 bits (79), Expect = 0.21
Identities = 20/40 (50%), Positives = 21/40 (52%)
Frame = -2
Query: 518 HQRYRXRSXGVQIRSHGVQIRXHGVQIRSHGVQIRSHAXS 399
H +Y RS G RSHG R HG RSHG RSH S
Sbjct: 184 HPQYE-RSHGQYKRSHGQSERSHGHSERSHGHSERSHGHS 222
Score = 33.5 bits (73), Expect = 1.1
Identities = 25/73 (34%), Positives = 28/73 (38%)
Frame = -2
Query: 500 RSXGVQIRSHGVQIRXHGVQIRSHGVQIRSHAXSYXIQSRGVQIQNRARSFRIRSHVQSH 321
RS RS G R H RSHG RSH S R R+ RSH S
Sbjct: 168 RSLSQSDRSQGQLKRHHPQYERSHGQYKRSHGQS----ERSHGHSERSHGHSERSHGHSE 223
Query: 320 RTQSHDRNYXIQG 282
R+ H + QG
Sbjct: 224 RSHGHSKRSRSQG 236
>AL109751-2|CAC09922.1| 313|Homo sapiens leucine zipper protein 4
protein.
Length = 313
Score = 40.7 bits (91), Expect = 0.007
Identities = 23/48 (47%), Positives = 27/48 (56%)
Frame = -2
Query: 521 SHQRYRXRSXGVQIRSHGVQIRXHGVQIRSHGVQIRSHAXSYXIQSRG 378
SH +Y+ RS G RSHG R HG RSHG RSH S +S+G
Sbjct: 190 SHGQYK-RSHGQSERSHGHSERSHGHSERSHGHSERSHGHSKRSRSQG 236
Score = 35.9 bits (79), Expect = 0.21
Identities = 20/40 (50%), Positives = 21/40 (52%)
Frame = -2
Query: 518 HQRYRXRSXGVQIRSHGVQIRXHGVQIRSHGVQIRSHAXS 399
H +Y RS G RSHG R HG RSHG RSH S
Sbjct: 184 HPQYE-RSHGQYKRSHGQSERSHGHSERSHGHSERSHGHS 222
Score = 33.5 bits (73), Expect = 1.1
Identities = 25/73 (34%), Positives = 28/73 (38%)
Frame = -2
Query: 500 RSXGVQIRSHGVQIRXHGVQIRSHGVQIRSHAXSYXIQSRGVQIQNRARSFRIRSHVQSH 321
RS RS G R H RSHG RSH S R R+ RSH S
Sbjct: 168 RSLSQSDRSQGQLKRHHPQYERSHGQYKRSHGQS----ERSHGHSERSHGHSERSHGHSE 223
Query: 320 RTQSHDRNYXIQG 282
R+ H + QG
Sbjct: 224 RSHGHSKRSRSQG 236
>AF124430-1|AAF28870.1| 313|Homo sapiens HOM-TES-85 tumor antigen
protein.
Length = 313
Score = 40.7 bits (91), Expect = 0.007
Identities = 23/48 (47%), Positives = 27/48 (56%)
Frame = -2
Query: 521 SHQRYRXRSXGVQIRSHGVQIRXHGVQIRSHGVQIRSHAXSYXIQSRG 378
SH +Y+ RS G RSHG R HG RSHG RSH S +S+G
Sbjct: 190 SHGQYK-RSHGQSERSHGHSERSHGHSERSHGHSERSHGHSKRSRSQG 236
Score = 35.9 bits (79), Expect = 0.21
Identities = 20/40 (50%), Positives = 21/40 (52%)
Frame = -2
Query: 518 HQRYRXRSXGVQIRSHGVQIRXHGVQIRSHGVQIRSHAXS 399
H +Y RS G RSHG R HG RSHG RSH S
Sbjct: 184 HPQYE-RSHGQYKRSHGQSERSHGHSERSHGHSERSHGHS 222
Score = 33.5 bits (73), Expect = 1.1
Identities = 25/73 (34%), Positives = 28/73 (38%)
Frame = -2
Query: 500 RSXGVQIRSHGVQIRXHGVQIRSHGVQIRSHAXSYXIQSRGVQIQNRARSFRIRSHVQSH 321
RS RS G R H RSHG RSH S R R+ RSH S
Sbjct: 168 RSLSQSDRSQGQLKRHHPQYERSHGQYKRSHGQS----ERSHGHSERSHGHSERSHGHSE 223
Query: 320 RTQSHDRNYXIQG 282
R+ H + QG
Sbjct: 224 RSHGHSKRSRSQG 236
>BC041829-1|AAH41829.1| 300|Homo sapiens chromosome 17 open reading
frame 39 protein.
Length = 300
Score = 32.7 bits (71), Expect = 2.0
Identities = 22/74 (29%), Positives = 28/74 (37%)
Frame = +3
Query: 609 HXXRXRPXXALPTSLGWXXALAXXWWPSPPXXXXGPPTPXLXPVXPPICLKSLXSLXXLS 788
H R RP +LP +L A A P PP G P + PP S S L
Sbjct: 46 HPARARPGLSLPATLLGSRAAAAVPLPLPPALAPGDPAMPVRTECPPPAGASAASAASLI 105
Query: 789 IXPPXHSXNXXLFT 830
PP ++ + T
Sbjct: 106 PPPPINTQQPGVAT 119
>AK074284-1|BAB85036.1| 300|Homo sapiens protein ( Homo sapiens
cDNA FLJ23704 fis, clone HEP10851. ).
Length = 300
Score = 32.7 bits (71), Expect = 2.0
Identities = 22/74 (29%), Positives = 28/74 (37%)
Frame = +3
Query: 609 HXXRXRPXXALPTSLGWXXALAXXWWPSPPXXXXGPPTPXLXPVXPPICLKSLXSLXXLS 788
H R RP +LP +L A A P PP G P + PP S S L
Sbjct: 46 HPARARPGLSLPATLLGSRAAAAVPLPLPPALAPGDPAMPVRTECPPPAGASAASAASLI 105
Query: 789 IXPPXHSXNXXLFT 830
PP ++ + T
Sbjct: 106 PPPPINTQQPGVAT 119
>BC093046-1|AAH93046.1| 592|Homo sapiens signal peptide
peptidase-like 2B protein.
Length = 592
Score = 31.9 bits (69), Expect = 3.4
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = -1
Query: 402 KLXNPESWCPNPESCPKLPNPESRPKSPNPESRPKLXNP 286
K+ P W P P P+ P + P SP P S +P
Sbjct: 506 KVLPPSPWAPAPADGPQPPKDSATPLSPQPPSEEPATSP 544
>AY169315-1|AAO12540.1| 592|Homo sapiens intramembrane protease
protein.
Length = 592
Score = 31.9 bits (69), Expect = 3.4
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = -1
Query: 402 KLXNPESWCPNPESCPKLPNPESRPKSPNPESRPKLXNP 286
K+ P W P P P+ P + P SP P S +P
Sbjct: 506 KVLPPSPWAPAPADGPQPPKDSATPLSPQPPSEEPATSP 544
>AJ420897-1|CAD13134.1| 564|Homo sapiens SPPL2b protein protein.
Length = 564
Score = 31.9 bits (69), Expect = 3.4
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = -1
Query: 402 KLXNPESWCPNPESCPKLPNPESRPKSPNPESRPKLXNP 286
K+ P W P P P+ P + P SP P S +P
Sbjct: 478 KVLPPSPWAPAPADGPQPPKDSATPLSPQPPSEEPATSP 516
>AJ345027-1|CAC87788.1| 592|Homo sapiens presenilin-like protein 1
protein.
Length = 592
Score = 31.9 bits (69), Expect = 3.4
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = -1
Query: 402 KLXNPESWCPNPESCPKLPNPESRPKSPNPESRPKLXNP 286
K+ P W P P P+ P + P SP P S +P
Sbjct: 506 KVLPPSPWAPAPADGPQPPKDSATPLSPQPPSEEPATSP 544
>AC004410-1|AAC05601.1| 398|Homo sapiens fos39554_1 protein.
Length = 398
Score = 31.9 bits (69), Expect = 3.4
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = -1
Query: 402 KLXNPESWCPNPESCPKLPNPESRPKSPNPESRPKLXNP 286
K+ P W P P P+ P + P SP P S +P
Sbjct: 312 KVLPPSPWAPAPADGPQPPKDSATPLSPQPPSEEPATSP 350
>AB040965-1|BAA96056.1| 601|Homo sapiens KIAA1532 protein protein.
Length = 601
Score = 31.9 bits (69), Expect = 3.4
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = -1
Query: 402 KLXNPESWCPNPESCPKLPNPESRPKSPNPESRPKLXNP 286
K+ P W P P P+ P + P SP P S +P
Sbjct: 515 KVLPPSPWAPAPADGPQPPKDSATPLSPQPPSEEPATSP 553
>BC017505-1|AAH17505.1| 424|Homo sapiens Unknown (protein for
IMAGE:4873434) protein.
Length = 424
Score = 31.5 bits (68), Expect = 4.5
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -1
Query: 387 ESWCPNPESCPKLPNPESRPKSPNPESRPKLXNPGLR 277
ES PESCP+L S P P + P + P LR
Sbjct: 380 ESSGSTPESCPELHGTGSTGTDPRPPAEPPILVPALR 416
>AF010403-1|AAC51734.1| 5262|Homo sapiens ALR protein.
Length = 5262
Score = 31.5 bits (68), Expect = 4.5
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -1
Query: 390 PESWCPNPESCPKLPNPESRPKSPNPESRPKLXNP 286
P+ P E P LP PE P SP PE P P
Sbjct: 428 PQLEAPLNEEMPLLPPPEESPLSPPPEESPTSPPP 462
>BC025688-1|AAH25688.1| 377|Homo sapiens mucin 7, secreted protein.
Length = 377
Score = 31.1 bits (67), Expect = 6.0
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -1
Query: 375 PNPESCPKLPNPESRPKSPNPESRPKLXNPGL 280
P+P + PK PNP PK P+ S + NP L
Sbjct: 76 PSPNNPPKFPNPHQPPKHPDKNS--SVVNPTL 105
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,551,072
Number of Sequences: 237096
Number of extensions: 1390977
Number of successful extensions: 6746
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6556
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12214492840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -