Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_P17
         (933 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-905|AAF46171.2| 3166|Drosophila melanogaster CG3950-PA ...    31   3.0  
AE014298-594|AAF45916.1|  270|Drosophila melanogaster CG15375-PA...    31   3.0  

>AE014298-905|AAF46171.2| 3166|Drosophila melanogaster CG3950-PA
            protein.
          Length = 3166

 Score = 30.7 bits (66), Expect = 3.0
 Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
 Frame = -1

Query: 399  LXNPESWCPNPESCPKLPNPESRPKSPNPESR-PKLXNPG 283
            L NP    P  E  PK P     PKSP  + R P +   G
Sbjct: 1429 LVNPSKKSPKEEDSPKYPKGPETPKSPRNDQRIPSIPKKG 1468


>AE014298-594|AAF45916.1|  270|Drosophila melanogaster CG15375-PA
           protein.
          Length = 270

 Score = 30.7 bits (66), Expect = 3.0
 Identities = 12/19 (63%), Positives = 12/19 (63%)
 Frame = -1

Query: 354 KLPNPESRPKSPNPESRPK 298
           K PNP   PK PNP  RPK
Sbjct: 77  KPPNPPEPPKPPNPPERPK 95



 Score = 29.5 bits (63), Expect = 6.9
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -1

Query: 402 KLXNPESWCPNPESCPKLPNPESRPKS 322
           ++ N  +  PNP   PK PNP  RPK+
Sbjct: 70  QMENEAAKPPNPPEPPKPPNPPERPKA 96


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,862,436
Number of Sequences: 53049
Number of extensions: 406309
Number of successful extensions: 2190
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2161
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4607820675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)