Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_P15
(896 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 36 0.059
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 36 0.059
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 33 0.41
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.96
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 31 1.7
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_55438| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 30 2.2
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 30 2.2
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 30 2.2
SB_43690| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 29 3.9
SB_24696| Best HMM Match : F5_F8_type_C (HMM E-Value=0.00023) 29 5.1
SB_26709| Best HMM Match : CtnDOT_TraJ (HMM E-Value=8.8) 29 5.1
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_13204| Best HMM Match : GRP (HMM E-Value=0.0017) 28 8.9
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_59124| Best HMM Match : Bac_luciferase (HMM E-Value=1.6) 28 8.9
SB_41763| Best HMM Match : S_layer_C (HMM E-Value=1.2) 28 8.9
SB_41761| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.025) 28 8.9
SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26) 28 8.9
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 28 8.9
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 35.5 bits (78), Expect = 0.059
Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 5/45 (11%)
Frame = +3
Query: 693 PPPXRX-----PXPFXGXVXXXPPTXXKTPXXXXXAPPPXPHXAP 812
PPP R P P G + PP K P APPP P AP
Sbjct: 321 PPPSRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSAPPPPPGRAP 365
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +3
Query: 693 PPPXRXPXPFXGXVXXXPPTXXKTPXXXXXAPPPXP 800
PPP R P P G PP + P PPP P
Sbjct: 359 PPPGRAPQPLGGP--PPPPPGRRPPSGKINPPPPPP 392
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = +2
Query: 731 GXXXPPHPXKNPPXRXXGPPPXXPXRPXQPXXPXGXI 841
G PP P + PP PPP P +P G +
Sbjct: 369 GGPPPPPPGRRPPSGKINPPPPPPPAMDKPSFTNGPV 405
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 743 PPHPXKNPPXRXXGPPPXXPXRPXQPXXPXG 835
PP P + P R PPP RP P P G
Sbjct: 217 PPPPGRGPSQRSLAPPPTGSSRPL-PAPPPG 246
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 743 PPHPXKNPPXRXXGPPPXXPXRPXQP 820
PP P PP PP P R QP
Sbjct: 342 PPPPISKPPTSTRSAPPPPPGRAPQP 367
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 35.5 bits (78), Expect = 0.059
Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 5/45 (11%)
Frame = +3
Query: 693 PPPXRX-----PXPFXGXVXXXPPTXXKTPXXXXXAPPPXPHXAP 812
PPP R P P G + PP K P APPP P AP
Sbjct: 233 PPPSRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSAPPPPPGRAP 277
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +3
Query: 693 PPPXRXPXPFXGXVXXXPPTXXKTPXXXXXAPPPXP 800
PPP R P P G PP + P PPP P
Sbjct: 271 PPPGRAPQPLGG--PPPPPPGRRPPSGKINPPPPPP 304
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = +2
Query: 731 GXXXPPHPXKNPPXRXXGPPPXXPXRPXQPXXPXGXI 841
G PP P + PP PPP P +P G +
Sbjct: 281 GGPPPPPPGRRPPSGKINPPPPPPPAMDKPSFTNGPV 317
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 743 PPHPXKNPPXRXXGPPPXXPXRPXQPXXPXG 835
PP P + P R PPP RP P P G
Sbjct: 129 PPPPGRGPSQRSLAPPPTGSSRPL-PAPPPG 158
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 743 PPHPXKNPPXRXXGPPPXXPXRPXQP 820
PP P PP PP P R QP
Sbjct: 254 PPPPISKPPTSTRSAPPPPPGRAPQP 279
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 32.7 bits (71), Expect = 0.41
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +2
Query: 725 GAGXXXPPHPXKNPPXRXXGPPPXXPXRPXQPXXP 829
G G PP P PP PPP P P P P
Sbjct: 459 GVGQAPPPPPPPPPPPPPPPPPPPPPPPPFPPPPP 493
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 743 PPHPXKNPPXRXXGPPPXXPXRPXQPXXP 829
PP P PP PPP P P P P
Sbjct: 468 PPPPPPPPPPPPPPPPPPPPFPPPPPPTP 496
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 31.5 bits (68), Expect = 0.96
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +2
Query: 743 PPHPXKNPPXRXXGPPPXXPXRPXQPXXP 829
PP+P PP PPP P P P P
Sbjct: 190 PPNPPYPPPPNAPNPPPPNPPYPPPPNAP 218
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +2
Query: 743 PPHPXKNPPXRXXGPPPXXPXRPXQPXXP 829
PP+P PP PPP P P P P
Sbjct: 111 PPNPPYPPPPNAPYPPPPNPPYPPPPNAP 139
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +3
Query: 693 PPPXRXPXPFXGXVXXXPPTXXKTPXXXXXAPPPXPHXAP 812
PPP P P PP P PPP P P
Sbjct: 695 PPPPPPPPPLLSGTLPMPPPPPPPPPGCAGLPPPPPSPQP 734
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 30.3 bits (65), Expect = 2.2
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 743 PPHPXKNPPXRXXGPPPXXPXRPXQPXXP 829
PP+ PP PPP P +P +P P
Sbjct: 792 PPNIPSRPPGARPTPPPPPPGKPTKPTKP 820
>SB_55438| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -1
Query: 188 SSADRAESQHQREDEAQXTYEIHFTEIL*CRRIQNSN 78
+ D E + + E+E + +YE +TEIL RR+ + N
Sbjct: 341 NQVDGEEEEEEEEEEEEDSYEDEYTEILQRRRVVSFN 377
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -1
Query: 188 SSADRAESQHQREDEAQXTYEIHFTEIL*CRRIQNSN 78
+ D E + + E+E + +YE +TEIL RR+ + N
Sbjct: 985 NQVDGEEEEEEEEEEEEDSYEDEYTEILQRRRVVSFN 1021
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +2
Query: 743 PPHPXKNPPXRXXGPPPXXPXRPXQPXXP 829
PP P +PP PPP P P P P
Sbjct: 371 PPPPPPSPPPPPPPPPPSPPPPPQPPPPP 399
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +3
Query: 678 PXXXXPPPXRXPXPFXGXVXXXPPTXXKTPXXXXXAPPPXPHXAP 812
P PPP P P PP P PPP P AP
Sbjct: 376 PSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAP 420
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +2
Query: 743 PPHPXKNPPXRXXGPPPXXPXRPXQPXXP 829
PP P +PP PPP P P P P
Sbjct: 382 PPPPPPSPPPPPQPPPPPPPPPPPPPPPP 410
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +3
Query: 678 PXXXXPPPXRXPXPFXGXVXXXPPTXXKTPXXXXXAPPPXPHXAP 812
P PPP P P PP P APPP P P
Sbjct: 384 PPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPP 428
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +2
Query: 743 PPHPXKNPPXRXXGPPPXXPXRPXQPXXP 829
PP P PP + PPP P P P P
Sbjct: 384 PPPPSPPPPPQPPPPPPPPPPPPPPPPPP 412
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +2
Query: 728 AGXXXPPHPXKNPPXRXXGPPPXXPXRPXQPXXP 829
AG P P PP PPP P P P P
Sbjct: 359 AGINMSPPPPPPPPPPPPSPPPPPPPPPPSPPPP 392
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 743 PPHPXKNPPXRXXGPPPXXPXRPXQPXXP 829
PP P PP PPP P P P P
Sbjct: 367 PPPPPPPPPPSPPPPPPPPPPSPPPPPQP 395
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +2
Query: 743 PPHPXKNPPXRXXGPPPXXPXRPXQPXXP 829
PP P + PP PPP P P P P
Sbjct: 389 PPPPPQPPPPPPPPPPPPPPPPPPPPPPP 417
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 743 PPHPXKNPPXRXXGPPPXXPXRPXQPXXP 829
PP P PP PPP P P P P
Sbjct: 392 PPQPPPPPPPPPPPPPPPPPPPPPPPPAP 420
Score = 29.5 bits (63), Expect = 3.9
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 743 PPHPXKNPPXRXXGPPPXXPXRPXQPXXP 829
PP P PP PPP P P P P
Sbjct: 383 PPPPPSPPPPPQPPPPPPPPPPPPPPPPP 411
Score = 29.5 bits (63), Expect = 3.9
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = +3
Query: 678 PXXXXPPPXRXPXPFXGXVXXXPPTXXKTPXXXXXAPPPXPHXAP 812
P PPP + P P PP P PPP P P
Sbjct: 385 PPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPP 429
Score = 29.5 bits (63), Expect = 3.9
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 743 PPHPXKNPPXRXXGPPPXXPXRPXQPXXP 829
PP P PP PPP P P P P
Sbjct: 398 PPPPPPPPPPPPPPPPPPPPPAPPPPPPP 426
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 743 PPHPXKNPPXRXXGPPPXXPXRPXQPXXP 829
PP P PP PPP P P P P
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPP 393
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = +3
Query: 678 PXXXXPPPXRXPXPFXGXVXXXPPTXXKTPXXXXXAPPPXPHXAP 812
P PPP P P PP + P PPP P P
Sbjct: 367 PPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPP 411
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 743 PPHPXKNPPXRXXGPPPXXPXRPXQPXXP 829
PP P PP PPP P P P P
Sbjct: 368 PPPPPPPPPSPPPPPPPPPPSPPPPPQPP 396
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = +3
Query: 678 PXXXXPPPXRXPXPFXGXVXXXPPTXXKTPXXXXXAPPPXPHXAP 812
P PPP P P PP P PPP P P
Sbjct: 374 PPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPP 418
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 743 PPHPXKNPPXRXXGPPPXXPXRPXQPXXP 829
PP P PP PPP P P P P
Sbjct: 390 PPPPQPPPPPPPPPPPPPPPPPPPPPPPP 418
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 743 PPHPXKNPPXRXXGPPPXXPXRPXQPXXP 829
PP P PP PPP P P P P
Sbjct: 395 PPPPPPPPPPPPPPPPPPPPPPPPAPPPP 423
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 743 PPHPXKNPPXRXXGPPPXXPXRPXQPXXP 829
PP P PP PPP P P P P
Sbjct: 396 PPPPPPPPPPPPPPPPPPPPPPPAPPPPP 424
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 743 PPHPXKNPPXRXXGPPPXXPXRPXQPXXP 829
PP P PP PPP P P P P
Sbjct: 399 PPPPPPPPPPPPPPPPPPPPAPPPPPPPP 427
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 743 PPHPXKNPPXRXXGPPPXXPXRPXQPXXP 829
PP P PP PPP P P P P
Sbjct: 401 PPPPPPPPPPPPPPPPPPAPPPPPPPPPP 429
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 743 PPHPXKNPPXRXXGPPPXXPXRPXQPXXP 829
PP P PP PPP P P P P
Sbjct: 402 PPPPPPPPPPPPPPPPPAPPPPPPPPPPP 430
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = +3
Query: 678 PXXXXPPPXRXPXPFXGXVXXXPPTXXKTPXXXXXAPPPXPHXAP 812
P PPP P P PP P PPP P P
Sbjct: 368 PPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPP 412
Score = 28.7 bits (61), Expect = 6.7
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = +3
Query: 678 PXXXXPPPXRXPXPFXGXVXXXPPTXXKTPXXXXXAPPPXPHXAP 812
P PPP P P PP P PPP P P
Sbjct: 380 PPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPP 424
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +3
Query: 693 PPPXRXPXPFXGXVXXXPPTXXKTPXXXXXAPPPXPHXAP 812
PPP P P PP P PPP P P
Sbjct: 366 PPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPP 405
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = +3
Query: 678 PXXXXPPPXRXPXPFXGXVXXXPPTXXKTPXXXXXAPPPXPHXAP 812
P PPP P P PP P PPP P P
Sbjct: 369 PPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPP 413
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = +3
Query: 678 PXXXXPPPXRXPXPFXGXVXXXPPTXXKTPXXXXXAPPPXPHXAP 812
P PPP P P PP P PPP P P
Sbjct: 373 PPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPP 417
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = +3
Query: 678 PXXXXPPPXRXPXPFXGXVXXXPPTXXKTPXXXXXAPPPXPHXAP 812
P PPP P P PP P PPP P P
Sbjct: 378 PPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPP 422
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = +3
Query: 678 PXXXXPPPXRXPXPFXGXVXXXPPTXXKTPXXXXXAPPPXPHXAP 812
P PPP P P PP P PPP P P
Sbjct: 386 PPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPP 430
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +2
Query: 743 PPHPXKNPPXRXXGPPPXXPXRPXQPXXP 829
PP P + PP PPP P P P P
Sbjct: 205 PPPPPRPPPSPPPPPPPPSPSPPRPPPPP 233
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 743 PPHPXKNPPXRXXGPPPXXPXRPXQPXXP 829
PP P +PP R PPP P RP P
Sbjct: 219 PPPPSPSPP-RPPPPPPPSPPRPLAAKLP 246
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +2
Query: 743 PPHPXKNPPXRXXGPPPXXPXRPXQPXXP 829
PP P PP PPP P +P P
Sbjct: 204 PPPPPPRPPPSPPPPPPPPSPSPPRPPPP 232
>SB_43690| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 780
Score = 29.9 bits (64), Expect = 2.9
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 5/45 (11%)
Frame = +1
Query: 694 PPPXXRPXPXXGXSXRXXXXXXXXXXAXX-----GPPPPXPXPPP 813
PPP P P G A GPPPP P PPP
Sbjct: 685 PPPAPPPPPIGGGDPTIWVSGGPPLSAPPLSSTLGPPPPAPPPPP 729
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = +3
Query: 678 PXXXXPPPXRXPXPFXGXVXXXPPTXXKTPXXXXXAPPPXP 800
P PP P P G PP + P PPP P
Sbjct: 357 PVGGAAPPPPPPPPVGGPPPPPPPIEGRPPSSLGNPPPPPP 397
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/40 (35%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Frame = +2
Query: 731 GXXXPPHPXKN--PPXRXXGPPPXXPXRPXQPXXPXGXIG 844
G PP P + PP G PP P R P P +G
Sbjct: 284 GIQPPPPPSRGAAPPPPSRGAPPPPPSRGSAPPPPPARMG 323
>SB_24696| Best HMM Match : F5_F8_type_C (HMM E-Value=0.00023)
Length = 547
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 773 AXGGFXXGGGGRXDXPXKGXGRXXGGG 693
A GGF GGGG D G G GG
Sbjct: 352 AVGGFGGGGGGSEDNGASGGGGGYSGG 378
>SB_26709| Best HMM Match : CtnDOT_TraJ (HMM E-Value=8.8)
Length = 291
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 773 AXGGFXXGGGGRXDXPXKGXGRXXGGG 693
A GGF GGGG D G G GG
Sbjct: 222 AVGGFGGGGGGSEDNGASGGGGGYSGG 248
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +3
Query: 678 PXXXXPPPXRXPXPFXGXVXXXPPTXXKTPXXXXXAPPPXP 800
P PP P P G PP P PPP P
Sbjct: 953 PPPPPPPGGSAPPPGGGAPPLPPPPGGSAPPPPPPPPPPPP 993
>SB_13204| Best HMM Match : GRP (HMM E-Value=0.0017)
Length = 723
Score = 28.3 bits (60), Expect = 8.9
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 828 GKXGXWGRXGXWGGGPXXRXGGFFXGWG 745
G G WG WGG G F GWG
Sbjct: 477 GFPGGWGHGLGWGGPGFGWGGPGFGGWG 504
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 743 PPHPXKNPPXRXXGPPPXXPXRPXQP 820
PP P PP PPP P P P
Sbjct: 1159 PPPPPPPPPPSSPSPPPPPPPPPPPP 1184
>SB_59124| Best HMM Match : Bac_luciferase (HMM E-Value=1.6)
Length = 1953
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -2
Query: 235 RPTFSIFLKSFHLGSGAALTAPRASTN 155
RP+F + LKS G+GAA P TN
Sbjct: 1831 RPSFKLVLKSLEEGNGAARVRPCRITN 1857
>SB_41763| Best HMM Match : S_layer_C (HMM E-Value=1.2)
Length = 393
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 373 IHNYLQYCFKLNASLVXYHEVYFPKDFACPMT 278
+HN +YC LN ++ H ++PK P+T
Sbjct: 156 VHN-TKYCIPLNHPILSEHGAFYPKALPHPLT 186
>SB_41761| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.025)
Length = 1480
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 373 IHNYLQYCFKLNASLVXYHEVYFPKDFACPMT 278
+HN +YC LN ++ H ++PK P+T
Sbjct: 1323 VHN-TKYCIPLNHPILSEHGAFYPKALPHPLT 1353
>SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26)
Length = 1410
Score = 28.3 bits (60), Expect = 8.9
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1
Query: 781 GPPPPXPXPPP 813
GPPPP P PPP
Sbjct: 358 GPPPPPPPPPP 368
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 28.3 bits (60), Expect = 8.9
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1
Query: 781 GPPPPXPXPPP 813
GPPPP P PPP
Sbjct: 194 GPPPPPPPPPP 204
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,983,443
Number of Sequences: 59808
Number of extensions: 328117
Number of successful extensions: 2040
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1580
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2574115416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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