Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_P15
(896 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 0.17
U29096-1|AAA68406.1| 105|Caenorhabditis elegans Neuropeptide-li... 33 0.21
AC024788-3|AAF60614.2| 98|Caenorhabditis elegans Caenacin (cae... 33 0.37
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 31 0.85
U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase prot... 30 2.0
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.6
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.6
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 30 2.6
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 26 3.1
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 26 3.1
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 26 3.2
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 29 4.5
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 4.5
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 29 4.5
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 29 4.5
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 6.0
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 6.0
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 6.0
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 28 7.9
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 7.9
U28731-8|AAA68300.2| 113|Caenorhabditis elegans Hypothetical pr... 28 7.9
AF022983-5|AAK82915.1| 79|Caenorhabditis elegans Hypothetical ... 28 7.9
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 7.9
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 7.9
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 7.9
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/29 (55%), Positives = 17/29 (58%)
Frame = -3
Query: 828 GKXGXWGRXGXWGGGPXXRXGGFFXGWGG 742
G+ G WGR G GGGP GG GWGG
Sbjct: 38 GRSGGWGRPGWGGGGPGWGRGGGGSGWGG 66
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 767 GGFXXGGGGRXDXPXKGXGRXXGGG 693
GG GGGGR G GR GGG
Sbjct: 85 GGGGNGGGGRGGGGGGGGGRGGGGG 109
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -1
Query: 767 GGFXXGGGGRXDXPXKGXGRXXGGG 693
GG GGGGR G GR GGG
Sbjct: 102 GGRGGGGGGRGGGGGGGGGRGGGGG 126
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.1 bits (62), Expect(2) = 0.17
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 781 GPPPPXPXPPPXTXF 825
GPPPP P PPP F
Sbjct: 575 GPPPPPPPPPPSFMF 589
Score = 23.4 bits (48), Expect(2) = 0.17
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 772 AXXGPPPPXPXP 807
A GPPPP P P
Sbjct: 547 ANGGPPPPPPLP 558
>U29096-1|AAA68406.1| 105|Caenorhabditis elegans Neuropeptide-like
protein protein32 protein.
Length = 105
Score = 33.5 bits (73), Expect = 0.21
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3
Query: 825 KXGXWGRXGXWGGGPXXRXGGFFXGWGG 742
+ G WG G WG G GG GWGG
Sbjct: 54 RYGGWGGRGGWGRGGGRGYGGRGGGWGG 81
>AC024788-3|AAF60614.2| 98|Caenorhabditis elegans Caenacin
(caenorhabditis bacteriocin)protein 6 protein.
Length = 98
Score = 32.7 bits (71), Expect = 0.37
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -3
Query: 819 GXWGRXGXWGGGPXXRXGGFFXGWGG 742
G WGR G WGGG R G + G+GG
Sbjct: 69 GGWGRRG-WGGGWGRRGWGGYGGYGG 93
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 31.5 bits (68), Expect = 0.85
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +3
Query: 693 PPPXRXPXPFXGXVXXXPPTXXKTPXXXXXAPPPXP 800
PPP P P + PP P APPP P
Sbjct: 67 PPPPPPPPPLISILQQAPPPPPPPPPPTLKAPPPPP 102
Score = 24.6 bits (51), Expect(2) = 3.8
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 787 PPPXPXPPPXT 819
PPP P PPP T
Sbjct: 84 PPPPPPPPPPT 94
Score = 23.0 bits (47), Expect(2) = 3.8
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 784 PPPPXPXPP 810
PPPP P PP
Sbjct: 67 PPPPPPPPP 75
>U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase protein
4 protein.
Length = 751
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 819 GXWGRXGXWGGGPXXRXGGFFXGWGG 742
G WG WGG R GG GWGG
Sbjct: 699 GGWGNNDPWGGS---RWGGGRGGWGG 721
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Frame = +3
Query: 678 PXXXXPPPXRXPXP--FXGXVXXXPPTXXKTPXXXXXAPPPXP 800
P PPP R P P G PP+ P PPP P
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 339
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +3
Query: 693 PPPXRXPXPFXGXVXXXPPTXXKTPXXXXXAPPP 794
PPP R P G + PP + P PPP
Sbjct: 320 PPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 353
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 2/43 (4%)
Frame = +3
Query: 678 PXXXXPPPXRXPXP--FXGXVXXXPPTXXKTPXXXXXAPPPXP 800
P PPP R P P G PP+ P PPP P
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 349
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +3
Query: 693 PPPXRXPXPFXGXVXXXPPTXXKTPXXXXXAPPP 794
PPP R P G + PP + P PPP
Sbjct: 330 PPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 363
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/40 (35%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Frame = +2
Query: 731 GXXXPPHPXKN--PPXRXXGPPPXXPXRPXQPXXPXGXIG 844
G PP+P + PP PPP P P P P G
Sbjct: 121 GVPAPPNPPRTCCPPPTPAAPPPPPPPPPPAPEAPTQCCG 160
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 25.8 bits (54), Expect(2) = 3.1
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 784 PPPPXPXPPP 813
PPPP P PPP
Sbjct: 247 PPPPPPPPPP 256
Score = 22.2 bits (45), Expect(2) = 3.1
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 781 GPPPPXPXPP 810
G PPP P PP
Sbjct: 232 GAPPPPPLPP 241
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 25.8 bits (54), Expect(2) = 3.1
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 784 PPPPXPXPPP 813
PPPP P PPP
Sbjct: 233 PPPPPPPPPP 242
Score = 22.2 bits (45), Expect(2) = 3.1
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 781 GPPPPXPXPP 810
G PPP P PP
Sbjct: 218 GAPPPPPLPP 227
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 25.8 bits (54), Expect(2) = 3.2
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 784 PPPPXPXPPP 813
PPPP P PPP
Sbjct: 233 PPPPPPPPPP 242
Score = 22.2 bits (45), Expect(2) = 3.2
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 781 GPPPPXPXPP 810
G PPP P PP
Sbjct: 218 GAPPPPPLPP 227
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -3
Query: 828 GKXGXWGRXGXWGGGPXXRXGGFFXGWGG 742
G G G G +GGG + GG GWGG
Sbjct: 245 GGGGQGGYGGDYGGGWGQQGGGGQGGWGG 273
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 29.1 bits (62), Expect = 4.5
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 819 GXWGRXGXWGGGPXXRXGGFFXGWGG 742
G WGR G GGG G WGG
Sbjct: 55 GGWGRGGGRGGGDWGGNNGGGGNWGG 80
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/29 (51%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -3
Query: 813 WGRXGXWGGGPXXRXGGFFXG-WGGXX*P 730
WG G WGGGP R GG+ WGG P
Sbjct: 20 WG-PGGWGGGP-GRWGGWGGNRWGGGGGP 46
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -3
Query: 828 GKXGXWGRXGXWGGGPXXRXGGFFXGWGG 742
G G G G +GGG + GG GWGG
Sbjct: 207 GGGGQGGYGGDYGGGWGQQGGGGQGGWGG 235
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -3
Query: 828 GKXGXWGRXGXWGGGPXXRXGGFFXGWGG 742
G G G G +GGG + GG GWGG
Sbjct: 245 GGGGQGGYGGDYGGGWGQQGGGGQGGWGG 273
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = +3
Query: 678 PXXXXPPPXRXPXPFXGXVXXXPPTXXKTPXXXXXAPPPXPHXAP 812
P PPP P G PP P PPP P P
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP 752
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +2
Query: 731 GXXXPPHPXKNPPXRXXGPPPXXPXRPXQPXXPXGXIGG 847
G PP P PP PPP P P P GG
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = +3
Query: 678 PXXXXPPPXRXPXPFXGXVXXXPPTXXKTPXXXXXAPPPXPHXAP 812
P PPP P G PP P PPP P P
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP 752
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +2
Query: 731 GXXXPPHPXKNPPXRXXGPPPXXPXRPXQPXXPXGXIGG 847
G PP P PP PPP P P P GG
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = +3
Query: 678 PXXXXPPPXRXPXPFXGXVXXXPPTXXKTPXXXXXAPPPXPHXAP 812
P PPP P G PP P PPP P P
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP 335
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +2
Query: 731 GXXXPPHPXKNPPXRXXGPPPXXPXRPXQPXXPXGXIGG 847
G PP P PP PPP P P P GG
Sbjct: 324 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 362
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 828 GKXGXWGRXGXWGGGPXXRXGGFFXGW 748
G G WGR WG G GG+ GW
Sbjct: 256 GGWGGWGRGSRWGWG-RPSWGGWGRGW 281
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/30 (40%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Frame = +2
Query: 743 PPHPXKNPPXRXXGPPPXXPXR-PXQPXXP 829
PP P + PP P P P R P P P
Sbjct: 164 PPSPQRRPPRTPPSPEPRNPPRTPPSPIPP 193
>U28731-8|AAA68300.2| 113|Caenorhabditis elegans Hypothetical
protein F12A10.7 protein.
Length = 113
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Frame = -3
Query: 807 RXGXWGGG-PXXRXGGFFXGWGG 742
R G WGGG P GG+ G+GG
Sbjct: 49 RYGGWGGGYPYGGYGGYGGGYGG 71
>AF022983-5|AAK82915.1| 79|Caenorhabditis elegans Hypothetical
protein R13D11.10 protein.
Length = 79
Score = 28.3 bits (60), Expect = 7.9
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3
Query: 819 GXWGRXGXWGGGPXXRXGGFFXGWGG 742
G WG G +GG GG + GWGG
Sbjct: 37 GGWGGRGGYGGYGYRPYGG-YGGWGG 61
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = +3
Query: 693 PPPXRXPXPFXGX-VXXXPPTXXKTPXXXXXAPPPXPHXAP 812
PPP + P G PP P +PPP P +P
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP 280
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = +3
Query: 693 PPPXRXPXPFXGX-VXXXPPTXXKTPXXXXXAPPPXPHXAP 812
PPP + P G PP P +PPP P +P
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP 301
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = +3
Query: 693 PPPXRXPXPFXGX-VXXXPPTXXKTPXXXXXAPPPXPHXAP 812
PPP + P G PP P +PPP P +P
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP 286
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,356,111
Number of Sequences: 27780
Number of extensions: 278454
Number of successful extensions: 1703
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1470
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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