Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_P14
         (843 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   7.0  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   7.0  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   9.2  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   9.2  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   9.2  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   9.2  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   9.2  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +2

Query: 29  ILKIWSVLYVCASAC 73
           +++I+ ++Y CAS C
Sbjct: 300 VVEIYLLVYACASTC 314


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +2

Query: 29  ILKIWSVLYVCASAC 73
           +++I+ ++Y CAS C
Sbjct: 300 VVEIYLLVYACASTC 314


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 220 SGCICQAISGCKQGLQCEGET 282
           +G  C  ISG  +   C G+T
Sbjct: 439 AGSYCDVISGNAENGSCSGKT 459


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 220 SGCICQAISGCKQGLQCEGET 282
           +G  C  ISG  +   C G+T
Sbjct: 440 AGSYCDVISGNAENGSCSGKT 460


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 220 SGCICQAISGCKQGLQCEGET 282
           +G  C  ISG  +   C G+T
Sbjct: 440 AGSYCDVISGNAENGSCSGKT 460


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +1

Query: 433 FGQDCNGDGVV 465
           FGQD N DGV+
Sbjct: 434 FGQDLNQDGVM 444


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +1

Query: 433 FGQDCNGDGVV 465
           FGQD N DGV+
Sbjct: 434 FGQDLNQDGVM 444


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,087
Number of Sequences: 336
Number of extensions: 3383
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23244256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)