Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_P14
         (843 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0960 - 12739024-12739085,12739586-12739783,12739874-12739988     29   4.6  
04_04_0534 + 26071227-26071811                                         29   6.1  
03_06_0738 - 35883405-35884006,35884474-35884492                       28   8.1  
01_05_0787 - 25215911-25216041,25216308-25216366,25218239-252183...    28   8.1  

>03_02_0960 - 12739024-12739085,12739586-12739783,12739874-12739988
          Length = 124

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -1

Query: 402 GAVRVHSAARVGIRSVR*ETIDSGFSGISPVAPCDAEEA 286
           G +R H+AAR     +   T D+    + P  P  AEEA
Sbjct: 22  GRLRKHAAARPAAVKINDPTGDAAMVAVPPTTPAGAEEA 60


>04_04_0534 + 26071227-26071811
          Length = 194

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = +2

Query: 377 AALWTRTAPXRPSKTT*EDLARTATATEWSTAMTTWRSTRREATGAPPXLP 529
           A L TR    RP++   +   R   A  W   +TTWR T  +  G P  +P
Sbjct: 90  ARLATRRRGRRPARRRRDCAWRRPAAWRW---LTTWRRTASKPDGYPSGMP 137


>03_06_0738 - 35883405-35884006,35884474-35884492
          Length = 206

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 19/52 (36%), Positives = 24/52 (46%)
 Frame = -1

Query: 426 HVVLDGLXGAVRVHSAARVGIRSVR*ETIDSGFSGISPVAPCDAEEAARFTL 271
           H V DG  G+     A+  G+R    E       GI  + PCDAEE+A   L
Sbjct: 37  HAVTDGYVGSAE---ASVYGVRGGE-EPFLVRAHGIPAIRPCDAEESAAHAL 84


>01_05_0787 -
           25215911-25216041,25216308-25216366,25218239-25218336,
           25218521-25218831,25219298-25219402,25219831-25219886,
           25220029-25220105
          Length = 278

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 19/52 (36%), Positives = 24/52 (46%)
 Frame = -1

Query: 426 HVVLDGLXGAVRVHSAARVGIRSVR*ETIDSGFSGISPVAPCDAEEAARFTL 271
           H V DG  G+     A+  G+R    E       GI  + PCDAEE+A   L
Sbjct: 110 HAVTDGYVGSAE---ASVYGVRGGE-EPFLVRAHGIPAIRPCDAEESAAHAL 157


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,257,483
Number of Sequences: 37544
Number of extensions: 406014
Number of successful extensions: 970
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)