Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_P13
         (858 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74046-1|CAA98556.2|  178|Caenorhabditis elegans Hypothetical pr...    33   0.26 
U64847-4|AAB04873.1|  492|Caenorhabditis elegans Cytochrome p450...    32   0.45 
AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin for...    28   9.8  
AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for...    28   9.8  
AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei...    28   9.8  
AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protei...    28   9.8  

>Z74046-1|CAA98556.2|  178|Caenorhabditis elegans Hypothetical
           protein ZC116.1 protein.
          Length = 178

 Score = 33.1 bits (72), Expect = 0.26
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +2

Query: 92  LVLCGLLAAVSAAPQYYHGSSHWPYHHYDP 181
           L LC LLA  SA   YY  S + PY++Y P
Sbjct: 5   LALCSLLAVASAQYLYYPTSYYTPYYYYYP 34


>U64847-4|AAB04873.1|  492|Caenorhabditis elegans Cytochrome p450
           family protein 14A5 protein.
          Length = 492

 Score = 32.3 bits (70), Expect = 0.45
 Identities = 16/35 (45%), Positives = 17/35 (48%)
 Frame = -2

Query: 533 AFXSAGR*FSTRLSRKPSCLXNSHPREGSVFSSND 429
           AF + G  F  R  R P  L   HP  G VFSS D
Sbjct: 82  AFVTQGDAFVNRAQRLPEILFQPHPNTGVVFSSGD 116


>AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin form A
            protein.
          Length = 4280

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 604  RWSSPPRATCGTLTSXLETSPEHPMRSPKAV 696
            +W+ PP++T G      E  PE P   P  V
Sbjct: 1023 QWALPPQSTWGCSDIQFEIQPEEPRGQPAVV 1053


>AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B
            protein.
          Length = 4450

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 604  RWSSPPRATCGTLTSXLETSPEHPMRSPKAV 696
            +W+ PP++T G      E  PE P   P  V
Sbjct: 1023 QWALPPQSTWGCSDIQFEIQPEEPRGQPAVV 1053


>AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein
            805, isoform b protein.
          Length = 4450

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 604  RWSSPPRATCGTLTSXLETSPEHPMRSPKAV 696
            +W+ PP++T G      E  PE P   P  V
Sbjct: 1023 QWALPPQSTWGCSDIQFEIQPEEPRGQPAVV 1053


>AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protein
            805, isoform a protein.
          Length = 4280

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 604  RWSSPPRATCGTLTSXLETSPEHPMRSPKAV 696
            +W+ PP++T G      E  PE P   P  V
Sbjct: 1023 QWALPPQSTWGCSDIQFEIQPEEPRGQPAVV 1053


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,897,436
Number of Sequences: 27780
Number of extensions: 356752
Number of successful extensions: 942
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)