Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_P13
         (858 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g22060.1 68414.m02759 expressed protein                             31   0.98 
At1g52560.1 68414.m05933 26.5 kDa class I small heat shock prote...    29   3.0  
At3g18370.1 68416.m02336 C2 domain-containing protein contains P...    29   5.2  
At5g57230.1 68418.m07150 expressed protein                             28   9.1  
At5g55540.1 68418.m06919 expressed protein                             28   9.1  
At5g12970.1 68418.m01487 C2 domain-containing protein contains I...    28   9.1  
At5g04970.1 68418.m00526 pectinesterase, putative contains simil...    28   9.1  

>At1g22060.1 68414.m02759 expressed protein
          Length = 1999

 Score = 31.1 bits (67), Expect = 0.98
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +2

Query: 200  ESMLDTHSLWSNLANEMQHLDNMMKELSLKFPSIINE 310
            E MLDT   +S++  E++ + +   +LSLKF  +  E
Sbjct: 1932 EEMLDTKGRYSSMETELREMHDRYSQLSLKFAEVEGE 1968


>At1g52560.1 68414.m05933 26.5 kDa class I small heat shock
           protein-like (HSP26.5-P) contains Pfam profile: PF00011
           Hsp20/alpha crystallin family; identified in Scharf,
           K-D., et al,Cell Stress & Chaperones (2001) 6: 225-237.
          Length = 232

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 12/79 (15%), Positives = 40/79 (50%)
 Frame = +2

Query: 182 FSPYVRESMLDTHSLWSNLANEMQHLDNMMKELSLKFPSIINEGRVEGDKYQISIHLPGY 361
           F+P + E    T  + + L    ++++ +    ++    ++ + + + D Y++   +PG 
Sbjct: 88  FTPTLNEFFPPT--IGNTLIQATENMNRIFDNFNVNPFQLMGQVKEQDDCYKLRYEVPGL 145

Query: 362 EQKDINVKAKNGVLMVQAN 418
            ++D+ +   +G+L ++ +
Sbjct: 146 TKEDVKITVNDGILTIKGD 164


>At3g18370.1 68416.m02336 C2 domain-containing protein contains Pfam
           profile: PF00168 C2 domain
          Length = 815

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = +2

Query: 242 NEMQHLDNMMKELSLKFPSIINEGRVEG 325
           N+   L N MK++ +KF ++I++G +EG
Sbjct: 735 NKALLLSNQMKQVMIKFQNLIDDGDLEG 762


>At5g57230.1 68418.m07150 expressed protein 
          Length = 160

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +2

Query: 239 ANEMQHLDNMMKELSLKFPSIINEGRVEGDKY 334
           +N  QHLD M++E + +F   I   RVE  KY
Sbjct: 60  SNYTQHLDRMLEEAAAEFYPNIKFMRVECPKY 91


>At5g55540.1 68418.m06919 expressed protein
          Length = 1380

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 260 DNMMKELSLKFPSIINEGRVEGDKYQISIH 349
           D    + SL  PSI+ EGR +  K+QI+ H
Sbjct: 866 DPSSPDSSLLVPSILEEGRGKTQKWQINTH 895


>At5g12970.1 68418.m01487 C2 domain-containing protein contains
           INTERPRO:IPR000008 C2 domain
          Length = 769

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +1

Query: 292 PQHYKRRTR-GRRQVSDIYSPAWLRTERHQRESEKWSADGA 411
           PQ Y+   R GR+   ++    W+ T+  +  S+ W +D A
Sbjct: 140 PQWYRLEDRHGRKVKGELMLAVWMGTQADEAFSDAWHSDAA 180


>At5g04970.1 68418.m00526 pectinesterase, putative contains
           similarity to pectinesterase from Vitis vinifera
           GI:15081598, Prunus persica SP|Q43062; contains Pfam
           profile PF01095 pectinesterase
          Length = 624

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 2/90 (2%)
 Frame = +1

Query: 508 NHLPAEXKAAXG*QEASCPSPLTPPLXM*VVKRWSSPPRATCGTLTSXLETSPEHPMRSP 687
           +H P +       Q  S PSPL P +        S+P    C T+ S +++SP  P    
Sbjct: 61  SHPPTQPPTPPPSQSPSQPSPLPPNIAC-----KSTPYPKLCRTILSAVKSSPSDPYHYG 115

Query: 688 KAVQXTTLXXPHQRXCGVLARF--HIKFDP 771
           K      L    +R   V+ RF   ++ DP
Sbjct: 116 KFTMKQCLKQA-RRLSKVINRFAQRVEADP 144


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,185,861
Number of Sequences: 28952
Number of extensions: 343437
Number of successful extensions: 978
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 975
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1999652000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)