Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_P12
(841 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16337| Best HMM Match : efhand (HMM E-Value=3.7e-16) 110 2e-24
SB_10186| Best HMM Match : efhand (HMM E-Value=3e-14) 89 3e-18
SB_866| Best HMM Match : efhand (HMM E-Value=7.4e-18) 89 5e-18
SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 4e-09
SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29) 54 1e-07
SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39) 51 1e-06
SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39) 51 1e-06
SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41) 44 1e-04
SB_8146| Best HMM Match : efhand (HMM E-Value=1.2e-16) 43 3e-04
SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26) 42 8e-04
SB_14640| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_34262| Best HMM Match : efhand (HMM E-Value=6.3e-26) 38 0.010
SB_15743| Best HMM Match : efhand (HMM E-Value=3.6e-07) 38 0.010
SB_42726| Best HMM Match : efhand (HMM E-Value=6.4e-07) 36 0.041
SB_23574| Best HMM Match : efhand (HMM E-Value=2e-05) 35 0.071
SB_3224| Best HMM Match : efhand (HMM E-Value=0.00096) 35 0.094
SB_21204| Best HMM Match : efhand (HMM E-Value=1.7e-21) 34 0.17
SB_46583| Best HMM Match : Hus1 (HMM E-Value=0) 33 0.22
SB_1299| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_59191| Best HMM Match : efhand (HMM E-Value=1.6e-14) 33 0.38
SB_50111| Best HMM Match : GCC2_GCC3 (HMM E-Value=0) 33 0.38
SB_11074| Best HMM Match : efhand (HMM E-Value=1.79366e-43) 33 0.38
SB_6774| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.38
SB_3800| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.67
SB_50692| Best HMM Match : efhand (HMM E-Value=1.5e-15) 32 0.67
SB_14506| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_45639| Best HMM Match : efhand (HMM E-Value=9.1e-08) 29 4.7
SB_47225| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_27097| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_2411| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_35284| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_3682| Best HMM Match : efhand (HMM E-Value=7.4e-05) 28 8.2
>SB_16337| Best HMM Match : efhand (HMM E-Value=3.7e-16)
Length = 168
Score = 110 bits (264), Expect = 2e-24
Identities = 49/91 (53%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Frame = +2
Query: 200 QSSRGSRK-AKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLA 376
+ +GS+K A+R SNVF+MF Q Q+ EFKEAF ++D ++DG I KNDL+A FDSLG+L
Sbjct: 4 KGKKGSKKKAQRATSNVFAMFEQSQIQEFKEAFNMIDQNRDGFIDKNDLKAVFDSLGKLV 63
Query: 377 SEKELDEMVGEASGPINFXQLLTLFANRMSG 469
+++ +++M+ EASGPINF LTLF ++SG
Sbjct: 64 NDEYVEDMLNEASGPINFTMFLTLFGEKISG 94
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Frame = +3
Query: 471 GSDEDDVVINAFKTFDEEGK--IXSXRLRHALMTL 569
G+D +DV+ NAF +FD EGK I +L+ M++
Sbjct: 94 GTDPEDVIRNAFGSFDLEGKGSIDEEKLKRLCMSM 128
>SB_10186| Best HMM Match : efhand (HMM E-Value=3e-14)
Length = 133
Score = 89.4 bits (212), Expect = 3e-18
Identities = 41/85 (48%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Frame = +2
Query: 218 RKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDE 397
++A+R SNVF+MF Q Q+ EFKEAF ++D ++DG I K DL+ + SLG+ +++ LD+
Sbjct: 12 KRAQRATSNVFAMFDQTQIQEFKEAFNMIDQNRDGFIDKEDLKDMYASLGKSPNDQFLDD 71
Query: 398 MVGEASG-PINFXQLLTLFANRMSG 469
M+ EASG INF LTLF +++G
Sbjct: 72 MIEEASGSTINFTMFLTLFGEKLNG 96
Score = 31.5 bits (68), Expect = 0.88
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +3
Query: 471 GSDEDDVVINAFKTFDEE--GKIXSXRLRHALMTLG 572
G+D +DV+ NAF FDEE G+I +L L ++G
Sbjct: 96 GTDPEDVIKNAFGCFDEEGDGRIHEDKLCDMLTSVG 131
>SB_866| Best HMM Match : efhand (HMM E-Value=7.4e-18)
Length = 171
Score = 88.6 bits (210), Expect = 5e-18
Identities = 41/84 (48%), Positives = 56/84 (66%)
Frame = +2
Query: 218 RKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDE 397
++A R SNVF+MF Q Q+ EFKEAF ++D + DG I K DL SLG+ ++ L+E
Sbjct: 12 KRAHRATSNVFAMFDQSQIQEFKEAFNMIDQNHDGFIDKEDLHDMLASLGKDPTDGYLEE 71
Query: 398 MVGEASGPINFXQLLTLFANRMSG 469
MV E+ GPINF LTLF +++G
Sbjct: 72 MVKESPGPINFTMFLTLFGEKLNG 95
Score = 35.5 bits (78), Expect = 0.054
Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
Frame = +3
Query: 471 GSDEDDVVINAFKTFDEE--GKIXSXRLRHALMTLG 572
G+D +DV+ NAF FDE+ G+I L+ A+M++G
Sbjct: 95 GTDPEDVIRNAFACFDEDGNGRIHEDLLKEAMMSMG 130
>SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 59.3 bits (137), Expect = 4e-09
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Frame = +2
Query: 260 SQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPIN 427
+++Q+AEFKEAF L D D DG I +L SLG+ +E EL +M+ E +G I+
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 428 FXQLLTLFANRM 463
F + LT+ A +M
Sbjct: 66 FPEFLTMMARKM 77
Score = 41.5 bits (93), Expect = 8e-04
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +2
Query: 278 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA 412
E +EAF++ D D +G I +LR +LG +++E+DEM+ EA
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 129
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 474 SDEDDVVINAFKTFDEEGK--IXSXRLRHALMTLG 572
+D ++ + AF+ FD++G I + LRH + LG
Sbjct: 80 TDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG 114
>SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29)
Length = 420
Score = 54.0 bits (124), Expect = 1e-07
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Frame = +2
Query: 239 SNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA-- 412
S+V S++QVAE KEAF L D D G I ++L SLG+ +E+EL +M+ E
Sbjct: 278 SSVREKLSEEQVAELKEAFALFDKDGGGSISSSELAHVMRSLGQNPTEQELKDMIAEVDQ 337
Query: 413 --SGPINFXQLLTLFANRM 463
+G I+F + L + A ++
Sbjct: 338 DDNGEIDFPEFLQMVAKKI 356
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/45 (35%), Positives = 30/45 (66%)
Frame = +2
Query: 278 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA 412
E ++AF++ D + DG+I ++L+ +LG ++ E+DEM+ EA
Sbjct: 364 EIQDAFKVFDKNGDGMISSSELKLVMSNLGERLTDDEVDEMIREA 408
>SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 659
Score = 50.8 bits (116), Expect = 1e-06
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Frame = +2
Query: 281 FKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPINFXQLLTL 448
FKEAF L D D DG I +L SLG+ +E EL +M+ E +G I+F + LT+
Sbjct: 2 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 61
Query: 449 FANRM 463
A +M
Sbjct: 62 MARKM 66
Score = 41.9 bits (94), Expect = 6e-04
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Frame = +2
Query: 278 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINFXQ 436
E +EAF++ D D +G I +LR +LG +++E+DEM+ EA G +N+ +
Sbjct: 74 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYDE 130
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 474 SDEDDVVINAFKTFDEEGK--IXSXRLRHALMTLG 572
+D ++ + AF+ FD++G I + LRH + LG
Sbjct: 69 TDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG 103
>SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 250
Score = 50.8 bits (116), Expect = 1e-06
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Frame = +2
Query: 281 FKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPINFXQLLTL 448
FKEAF L D D DG I +L SLG+ +E EL +M+ E +G I+F + LT+
Sbjct: 2 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 61
Query: 449 FANRM 463
A +M
Sbjct: 62 MARKM 66
Score = 41.9 bits (94), Expect = 6e-04
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Frame = +2
Query: 278 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINFXQ 436
E +EAF++ D D +G I +LR +LG +++E+DEM+ EA G +N+ +
Sbjct: 74 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYDE 130
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +3
Query: 474 SDEDDVVINAFKTFDEEGK--IXSXRLRHALMTLG 572
+D ++ + AF+ FD++G I + LRH + LG
Sbjct: 69 TDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLG 103
>SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41)
Length = 153
Score = 44.4 bits (100), Expect = 1e-04
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Frame = +2
Query: 275 AEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINFXQLL 442
AE +EAF++ D + DG I + +LR+ SLG S+ E+ EM+ EA G INF + +
Sbjct: 73 AEMREAFRVFDRNGDGSISEWELRSVMASLGEKLSDDEIKEMMREADLDGDGVINFQEFV 132
Query: 443 TL 448
+
Sbjct: 133 QM 134
>SB_8146| Best HMM Match : efhand (HMM E-Value=1.2e-16)
Length = 285
Score = 43.2 bits (97), Expect = 3e-04
Identities = 18/51 (35%), Positives = 34/51 (66%)
Frame = +2
Query: 260 SQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA 412
S+ Q+AE+KEAF + D+D++G I ++L + +LG+ +E + +M+ A
Sbjct: 5 SKAQIAEYKEAFNMFDNDRNGTICSHELGSVMRALGQNPTEDMIRDMIASA 55
Score = 31.9 bits (69), Expect = 0.67
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 278 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA 412
E + AF+ MD D DG I DL+ T S+ +L M+ +A
Sbjct: 74 EIRMAFKSMDKDGDGFITFGDLKKTMQECDENLSDDDLKRMIIDA 118
>SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26)
Length = 213
Score = 41.5 bits (93), Expect = 8e-04
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Frame = +2
Query: 254 MFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGP 421
M Q E +EAF++ D D +G I +LR +LG +++E++EM+ EA G
Sbjct: 41 MGEQDSDEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVEEMIMEADIDGDGQ 100
Query: 422 INF-----XQLLTLFAN 457
+N+ LT FAN
Sbjct: 101 VNYEGGVSYMFLTSFAN 117
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +3
Query: 477 DEDDVVINAFKTFDEEGK--IXSXRLRHALMTLG 572
D D+ + AF+ FD++G I + LRH + LG
Sbjct: 45 DSDEEIREAFRVFDKDGNGFISAAELRHVMTNLG 78
>SB_14640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 39.9 bits (89), Expect = 0.003
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +2
Query: 275 AEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPINFXQLL 442
A++KEAF + D D G + +L +LG +E+E+ EMV E +G ++F + +
Sbjct: 148 AQYKEAFHMYDADGSGHVTTKELHKAMRTLGFNPTEEEIQEMVNEVDYDGNGVLDFNEFV 207
Query: 443 TLFANR 460
L N+
Sbjct: 208 DLMENQ 213
>SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 39.9 bits (89), Expect = 0.003
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Frame = +2
Query: 260 SQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPIN 427
+++Q+ EFK AF D + DG I +L S+G ++EL M+ +A SG I+
Sbjct: 10 TEEQIREFKNAFMSFDKNGDGRIDAEELGIVMRSIGLHPKDEELKAMIKQADKDGSGDID 69
Query: 428 FXQLLTLFANR 460
+ + L A++
Sbjct: 70 LPEFIELMASK 80
Score = 38.3 bits (85), Expect = 0.008
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +2
Query: 275 AEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINFXQLL 442
++ +EAF L D D +G+I +++ F +G +EKE E+V +A G IN+ +
Sbjct: 88 SDLREAFSLFDKDGNGLISAQEMKFVFTCMGFNITEKEAVELVKQADMDGDGHINYEEFK 147
Query: 443 TLF 451
F
Sbjct: 148 NAF 150
Score = 35.5 bits (78), Expect = 0.054
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +2
Query: 278 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINFXQLLT 445
EFK AF D + DG I +L S+G ++EL M+ +A SG I+ + +
Sbjct: 145 EFKNAFMSFDKNVDGRIDAEELEIVTRSIGLHPKDEELKAMIKQADKDGSGDIDLPEFIE 204
Query: 446 LFANR 460
L A++
Sbjct: 205 LMASK 209
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +2
Query: 275 AEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA 412
++ +EAF L D D +G+I +++ +G +EKE E+V +A
Sbjct: 217 SDLREAFSLFDKDGNGLISAQEMKFVLTCMGFNITEKEAVELVKQA 262
>SB_34262| Best HMM Match : efhand (HMM E-Value=6.3e-26)
Length = 354
Score = 37.9 bits (84), Expect = 0.010
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +2
Query: 260 SQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE 409
++ QV E KEAF + D + DG I +L+ SLG +E EL +M+ +
Sbjct: 207 TESQVREIKEAFLVFDDNGDGCITATELKKLVTSLGYNITEAELMDMMNQ 256
>SB_15743| Best HMM Match : efhand (HMM E-Value=3.6e-07)
Length = 97
Score = 37.9 bits (84), Expect = 0.010
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +2
Query: 272 VAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE 409
++++++AF+ D D +G I +L A SLG+ +E EL +MV E
Sbjct: 47 ISKYRDAFKFFDKDGNGHITTRELGAIMRSLGQNPTENELQDMVNE 92
>SB_42726| Best HMM Match : efhand (HMM E-Value=6.4e-07)
Length = 49
Score = 35.9 bits (79), Expect = 0.041
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +2
Query: 281 FKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE 409
+++AF+ D D +G I +L A SLG+ +E EL +MV E
Sbjct: 2 YRDAFKFFDKDGNGHITTRELGAIMRSLGQNPTENELQDMVNE 44
>SB_23574| Best HMM Match : efhand (HMM E-Value=2e-05)
Length = 69
Score = 35.1 bits (77), Expect = 0.071
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +2
Query: 281 FKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDE-MVG 406
F E F++ D + +G+IG +LR SLG S++E+D MVG
Sbjct: 7 FMECFKVFDRNGNGLIGAAELRHLLASLGDKLSDEEVDNLMVG 49
>SB_3224| Best HMM Match : efhand (HMM E-Value=0.00096)
Length = 322
Score = 34.7 bits (76), Expect = 0.094
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +2
Query: 335 NDLRATFDSLGRLASEKELDEMVGEASGPINFXQLLTLFANRMS 466
+DLR T SLG+ + +E+D+M+ E NF L++F RM+
Sbjct: 178 DDLRGTLSSLGQKPTFEEIDDMM-EGKPSFNFTSFLSMFGLRMA 220
>SB_21204| Best HMM Match : efhand (HMM E-Value=1.7e-21)
Length = 202
Score = 33.9 bits (74), Expect = 0.17
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +2
Query: 278 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVG----EASGPINFXQLLT 445
++++AF+ D D G I +L SLG +E EL +M+ + +G +NF + +
Sbjct: 51 KYRDAFEHFDKDSSGSITTRELGGIMRSLGENPTEIELQDMINSVDCDGNGLMNFDEFVK 110
Query: 446 LFANR 460
L +
Sbjct: 111 LMITK 115
>SB_46583| Best HMM Match : Hus1 (HMM E-Value=0)
Length = 646
Score = 33.5 bits (73), Expect = 0.22
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Frame = +2
Query: 251 SMFSQKQVA---EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEM---VGEA 412
S + +KQ EF E ++ D D G + +LR+ SLG S++E+ + V ++
Sbjct: 578 SAYQKKQTGSADEFVEGLRVFDRDGTGTVLAAELRSVLMSLGEKLSDEEVTTLFAPVDDS 637
Query: 413 SGPINF 430
SG IN+
Sbjct: 638 SGHINY 643
>SB_1299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 421
Score = 33.1 bits (72), Expect = 0.29
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 260 SQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSL-GRLASEKELDEMVGEAS 415
SQ+Q +AFQL D G + K+DL+ F L G S E+ E++ +++
Sbjct: 6 SQEQKTNILQAFQLADKTSKGYLDKHDLKVAFVYLFGYKPSSYEVQELMNKSN 58
>SB_59191| Best HMM Match : efhand (HMM E-Value=1.6e-14)
Length = 227
Score = 32.7 bits (71), Expect = 0.38
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = +2
Query: 284 KEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEAS----GPINFXQLLTLF 451
K+AF + D +KDG I + D R +S +E++ E++ + G I++ + L F
Sbjct: 162 KQAFLVFDDNKDGRITRRDFRRILESFCFRMTEEQFHELMAKIDPMNRGYISYLEFLDRF 221
Query: 452 ANRMS 466
+R S
Sbjct: 222 EHRES 226
>SB_50111| Best HMM Match : GCC2_GCC3 (HMM E-Value=0)
Length = 1115
Score = 32.7 bits (71), Expect = 0.38
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +2
Query: 194 DRQSSRGSRKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLG 367
D +RGS+ +R ++Q E KEAF L D DKD I ++L+ +LG
Sbjct: 9 DYGKNRGSKPKRRE-------LGEEQRQEIKEAFNLFDTDKDQAIDYHELKVAMRALG 59
>SB_11074| Best HMM Match : efhand (HMM E-Value=1.79366e-43)
Length = 779
Score = 32.7 bits (71), Expect = 0.38
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = +2
Query: 284 KEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEAS----GPINFXQLLTLF 451
K+AF + D +KDG I + D R +S +E++ E++ + G I++ + L F
Sbjct: 462 KQAFLVFDDNKDGRITRRDFRRILESFCFRMTEEQFHELMAKIDPMNRGYISYLEFLDRF 521
Query: 452 ANRMS 466
+R S
Sbjct: 522 EHRES 526
>SB_6774| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 32.7 bits (71), Expect = 0.38
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +2
Query: 194 DRQSSRGSRKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLG 367
D +RGS+ +R ++Q E KEAF L D DKD I ++L+ +LG
Sbjct: 9 DYGKNRGSKPKRRE-------LGEEQRQEIKEAFNLFDTDKDQAIDYHELKVAMRALG 59
>SB_3800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 31.9 bits (69), Expect = 0.67
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +2
Query: 278 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEASGP 421
+ +AF+++D DK G + +L G +++E++EM+ A P
Sbjct: 63 QLSKAFEVLDQDKKGYLTTEELTKYMTEEGEAFTQEEVEEMLSAAVDP 110
>SB_50692| Best HMM Match : efhand (HMM E-Value=1.5e-15)
Length = 150
Score = 31.9 bits (69), Expect = 0.67
Identities = 11/42 (26%), Positives = 26/42 (61%)
Frame = +2
Query: 278 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMV 403
+F ++ ++ D+D G+I + +LR +LG ++ E+D ++
Sbjct: 87 DFVDSLRVFDNDGSGMINEGELRHILTTLGEKLTDSEVDSLI 128
>SB_14506| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 359
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Frame = +2
Query: 233 TGSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE- 409
T +FS++Q+ EF++AF + + D I + SLG E E+ E + E
Sbjct: 213 TDQEAAKLFSREQIEEFEDAFSVYNKDGSDNIKTTLVFNLIRSLGHNPPEHEVWEYLNEL 272
Query: 410 ---ASGPINFXQLLTLFA 454
A+ + F + L A
Sbjct: 273 GLTANSKLKFRDFVKLMA 290
>SB_45639| Best HMM Match : efhand (HMM E-Value=9.1e-08)
Length = 144
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +2
Query: 248 FSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVG--EASGP 421
+S Q + EF E + D++ DG + LR SLG + + D +V + G
Sbjct: 72 YSKKPQGGMEEFIEGLRAFDNNSDGTMSSAQLRNLLTSLGDTLTPDQADAIVALQDNHGT 131
Query: 422 INFXQLL 442
I + +L+
Sbjct: 132 IEYEKLV 138
>SB_47225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 28.3 bits (60), Expect = 8.2
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = -1
Query: 502 ALITTSSSSEPAGHAVGEQSQELXEVDGARSLTDHLIELLLGREPAQGVEGGA 344
A+ +S +E HA+ EQ+++ + RSLT L E LL PA VE A
Sbjct: 24 AVAAGASIAEHIKHAIAEQAKKTVSLGFPRSLT--LAEKLLYAVPATPVESTA 74
>SB_27097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +2
Query: 194 DRQSSRGSRKAKRTGSNVFSMFSQKQVAEFKEAFQLMDHDKDGI 325
D + + GS K T ++ FS+K+ + +A HD DG+
Sbjct: 196 DLREAYGSSTTKETSASQRVEFSRKKKGSYTDAIPSSTHDNDGM 239
>SB_2411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 660
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 260 SQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLG 367
+++Q+ EF+ +F D D+ G + N+ + SLG
Sbjct: 512 TEEQMKEFRASFNFFDKDQTGKLEPNEFKQCLVSLG 547
>SB_35284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +2
Query: 236 GSNVFSMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEAS 415
G ++ S S++ + + AF++ D D G + K ++ S+ RLA E+ ++ + +
Sbjct: 91 GLSIISRGSKE--TKLRWAFEIYDSDGSGEVSKKEMLEIVRSIFRLAGEEVTAKLPRDEN 148
Query: 416 GPINFXQLLTL 448
P F L L
Sbjct: 149 TPEKFTSKLFL 159
>SB_3682| Best HMM Match : efhand (HMM E-Value=7.4e-05)
Length = 340
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
Frame = +2
Query: 320 GIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPINFXQLL 442
G++ + LRA D+LGR+A+ +E+ E + E +SG ++F + L
Sbjct: 164 GVLCRILLRAIPDTLGRMATTEEIKEAMLEVDVDSSGTVDFFEFL 208
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,111,114
Number of Sequences: 59808
Number of extensions: 252831
Number of successful extensions: 940
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2371447782
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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