Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_P11
(1031 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 45 2e-05
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 42 1e-04
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 42 2e-04
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 42 2e-04
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 25 0.062
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 33 0.066
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.20
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.35
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 30 0.61
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.81
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 25 0.91
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 29 1.1
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 29 1.1
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 28 2.5
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 44.8 bits (101), Expect = 2e-05
Identities = 38/147 (25%), Positives = 46/147 (31%), Gaps = 2/147 (1%)
Frame = +1
Query: 313 GNFPXPXGGXKPPXXTPPPXQXPXXXKKKTPXXXPXKIXXKXXPXXX--GKXXAAPPPGX 486
G+ P P G P PPP P ++ P + P G+ A PP
Sbjct: 349 GSIPLPPQGRSAPPP-PPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLG 407
Query: 487 KPXXWXXXXXPPLXFXPXPPPPPPXKXXFXXPPXAXXXGXPFPFXXPPPPPXXRVXPPPP 666
PP+ P PP P PP + G P PP PP + PP P
Sbjct: 408 NASR---TSTPPVPTPPSLPPSAPPSLPPSAPP-SLPMGAP---AAPPLPPSAPIAPPLP 460
Query: 667 KKXXPRXXTXXXAXXPPPPPPXXXLPP 747
A PPP P P
Sbjct: 461 AGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 36.3 bits (80), Expect = 0.007
Identities = 33/125 (26%), Positives = 38/125 (30%), Gaps = 6/125 (4%)
Frame = +1
Query: 391 KKKTPXXXPXKIXXKXXPXXXGKXXAA-PPPGXKPXXWXXXXXP-PLXFXPXPPPPPPXK 564
K+ P P + P G ++ PPP P P P PPPPPP
Sbjct: 309 KRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRS 368
Query: 565 XXF---XXPPXAXXXGXPFPFXXPPPPPXXRVXPPPPKKXXPRXXTXXXAXXPP-PPPPX 732
PP + P PP P PP R T P PP
Sbjct: 369 APSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAP 428
Query: 733 XXLPP 747
LPP
Sbjct: 429 PSLPP 433
Score = 34.7 bits (76), Expect = 0.021
Identities = 34/148 (22%), Positives = 37/148 (25%), Gaps = 6/148 (4%)
Frame = +1
Query: 322 PXPXGGXKPPXXTPPPXQXPXXXKKKTPXXXPXKIXXKXXPXXXGKXXAAPPPGXKPXXW 501
P P + PP P P P A PPP +
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPS 371
Query: 502 XXXXXPPLXFX------PXPPPPPPXKXXFXXPPXAXXXGXPFPFXXPPPPPXXRVXPPP 663
PPL P PPP P + PP P P PP PP
Sbjct: 372 TGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTP-PVPTPPSLPPSAPPS 430
Query: 664 PKKXXPRXXTXXXAXXPPPPPPXXXLPP 747
P PP PP PP
Sbjct: 431 LPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
Score = 33.5 bits (73), Expect = 0.050
Identities = 24/90 (26%), Positives = 27/90 (30%), Gaps = 2/90 (2%)
Frame = +1
Query: 466 AAPP-PGXKPXXWXXXXXPPLXFXPXPPPPPPXKXXFXXPPXAXXXGX-PFPFXXPPPPP 639
+APP P P P L PP PPP PP + P
Sbjct: 228 SAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINST 287
Query: 640 XXRVXPPPPKKXXPRXXTXXXAXXPPPPPP 729
PPP + PPPPPP
Sbjct: 288 SKPPLPPPSSRVSAAALAANKKRPPPPPPP 317
Score = 25.8 bits (54), Expect = 10.0
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +3
Query: 717 PPPPXXXPPPXTXXQKXPPXSFQKXTLSPP 806
PPPP P T Q PP S + +PP
Sbjct: 361 PPPPPPRSAPSTGRQ-PPPLSSSRAVSNPP 389
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 42.3 bits (95), Expect = 1e-04
Identities = 39/158 (24%), Positives = 41/158 (25%), Gaps = 16/158 (10%)
Frame = +1
Query: 322 PXPXGGXKPPXXTPPPXQXPXXXKKKTPXXXPXKIXXKXXPXXXGKXXAAPPPGXKPXXW 501
P P K P P P T P P +APPP P
Sbjct: 1013 PVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSE 1072
Query: 502 XXXXXPPLXFXPXPPP-------------PPPXKXXFXXPPXAXXXGXP---FPFXXPPP 633
P P P P PP K PP G P P PP
Sbjct: 1073 IPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPP 1132
Query: 634 PPXXRVXPPPPKKXXPRXXTXXXAXXPPPPPPXXXLPP 747
P PP PK + PP P P PP
Sbjct: 1133 VPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPP 1170
Score = 41.9 bits (94), Expect = 1e-04
Identities = 36/138 (26%), Positives = 38/138 (27%), Gaps = 4/138 (2%)
Frame = +1
Query: 346 PPXXTPPPXQXPXXXKKKTPXXXPXKIXXKXXPXXXGKXXAAPPPGXKPXXWXXXXXPPL 525
PP P P P + P G P P PP+
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPV 1161
Query: 526 XFXPXPPPPPPXKXXFXXP---PXAXXXGXPFPFXXPP-PPPXXRVXPPPPKKXXPRXXT 693
PP P P P A P P PP P P V P PP P T
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPT 1221
Query: 694 XXXAXXPPPPPPXXXLPP 747
A PP P P PP
Sbjct: 1222 PS-AGLPPVPVPTAKAPP 1238
Score = 41.5 bits (93), Expect = 2e-04
Identities = 31/135 (22%), Positives = 34/135 (25%), Gaps = 2/135 (1%)
Frame = +1
Query: 349 PXXTPPPXQXPXXXKKKTPXXXPXKIXXKXXPXXXGKXXAAPPPGXKPXXWXXXXXPPLX 528
P TPP + P P G P G P PP+
Sbjct: 1046 PTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVP 1105
Query: 529 --FXPXPPPPPPXKXXFXXPPXAXXXGXPFPFXXPPPPPXXRVXPPPPKKXXPRXXTXXX 702
PP P P P P P PP P PP P
Sbjct: 1106 KPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPS 1165
Query: 703 AXXPPPPPPXXXLPP 747
PP P P +PP
Sbjct: 1166 VAAPPVPAPSSGIPP 1180
Score = 41.1 bits (92), Expect = 2e-04
Identities = 41/150 (27%), Positives = 43/150 (28%), Gaps = 8/150 (5%)
Frame = +1
Query: 322 PXPXGGXKPPXXTPPPXQXPXXXKKKTPXXXPXKIXXKXXPXXXGKXXAAPPPGXKPXXW 501
P P PP P P P P K A PP P
Sbjct: 1084 PVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVP----KPSVAAPPVPVPSGA 1139
Query: 502 XXXXXPPLXFXPXPPP---PPPXKXXFXXPPX-AXXXGXPFPFXXP----PPPPXXRVXP 657
P + P P P PP K PP A G P P P PP P P
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIP-PVPKPAAGVPPVPPPSEAP 1198
Query: 658 PPPKKXXPRXXTXXXAXXPPPPPPXXXLPP 747
P PK + PP P P LPP
Sbjct: 1199 PVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Score = 35.5 bits (78), Expect = 0.012
Identities = 33/141 (23%), Positives = 34/141 (24%)
Frame = +1
Query: 322 PXPXGGXKPPXXTPPPXQXPXXXKKKTPXXXPXKIXXKXXPXXXGKXXAAPPPGXKPXXW 501
P P PP P P P + P G PP KP
Sbjct: 1113 PVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGA-----PPVPKPSVA 1167
Query: 502 XXXXXPPLXFXPXPPPPPPXKXXFXXPPXAXXXGXPFPFXXPPPPPXXRVXPPPPKKXXP 681
P P P P P A P P PPP P P P
Sbjct: 1168 APPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLP 1227
Query: 682 RXXTXXXAXXPPPPPPXXXLP 744
A PP P P P
Sbjct: 1228 -PVPVPTAKAPPVPAPSSEAP 1247
Score = 35.1 bits (77), Expect = 0.016
Identities = 31/141 (21%), Positives = 34/141 (24%), Gaps = 4/141 (2%)
Frame = +1
Query: 316 NFPXPXGGXKPPXXTPPPXQXPXXXKKKTPXXXPXKIXXKXXPXXXGKXXAAPPPGXKPX 495
+ P P G PP P P + P G P P
Sbjct: 1075 SIPAPSGA--PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPP 1132
Query: 496 XWXXXXXPPLXFXPXPPPPPPXKXXFXXPPXAXXXGXPFPFXX----PPPPPXXRVXPPP 663
PP+ PP P P P P P P P V P P
Sbjct: 1133 VPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVP 1192
Query: 664 PKKXXPRXXTXXXAXXPPPPP 726
P P P PPP
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPPP 1213
Score = 30.7 bits (66), Expect = 0.35
Identities = 31/135 (22%), Positives = 36/135 (26%), Gaps = 3/135 (2%)
Frame = +1
Query: 322 PXPXGGXKPPXXTPPPXQXPXXXKKKTPXXXPXKIXXKXXPXXXGKXXAAPPPGXKPXXW 501
P P PP P P P + P + PP KP
Sbjct: 1132 PVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPS----SGIPPVPKPAAG 1187
Query: 502 XXXXXPPLXFXPXPPPPPPXKXXFXXPPXAXXXGXPFPFXX--PPPPPXXRVXP-PPPKK 672
PP PP P P PP + P P P P P + P P P
Sbjct: 1188 VPPVPPP---SEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSS 1244
Query: 673 XXPRXXTXXXAXXPP 717
P T + P
Sbjct: 1245 EAPSVSTPRSSVPSP 1259
Score = 26.6 bits (56), Expect = 5.7
Identities = 16/67 (23%), Positives = 20/67 (29%)
Frame = +1
Query: 544 PPPPPXKXXFXXPPXAXXXGXPFPFXXPPPPPXXRVXPPPPKKXXPRXXTXXXAXXPPPP 723
PP P P P P PP PP P+ + + PP P
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPP----VPKSSSGAPSAPPPVP 1067
Query: 724 PPXXXLP 744
P +P
Sbjct: 1068 APSSEIP 1074
Score = 26.2 bits (55), Expect = 7.5
Identities = 22/77 (28%), Positives = 23/77 (29%), Gaps = 6/77 (7%)
Frame = +1
Query: 535 PXPPPPPPXKXXFXXP----PXAXXXGXPF--PFXXPPPPPXXRVXPPPPKKXXPRXXTX 696
P PPP P P P P P P P RV PP PK
Sbjct: 967 PSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARV-PPVPKLSSKAPPVP 1025
Query: 697 XXAXXPPPPPPXXXLPP 747
+ PP P PP
Sbjct: 1026 LPSADAPPIPVPSTAPP 1042
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 41.5 bits (93), Expect = 2e-04
Identities = 27/87 (31%), Positives = 27/87 (31%), Gaps = 1/87 (1%)
Frame = +1
Query: 466 AAPPPGXKPXXWXXXXXPPLXFXPXPPPPPPXKXXFXXPPXAXXXGXPFPFXXPPP-PPX 642
AAPP P PP P P PPP P P P PPP P
Sbjct: 122 AAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSP---ASAPPIPSKAPPIPSSLPPPAQPA 178
Query: 643 XRVXPPPPKKXXPRXXTXXXAXXPPPP 723
V PP P PPPP
Sbjct: 179 APVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 27.1 bits (57), Expect = 4.3
Identities = 17/65 (26%), Positives = 18/65 (27%), Gaps = 1/65 (1%)
Frame = +1
Query: 535 PXPPPPPPXKXXFXXPPXAXXXGXPFPFXXPPP-PPXXRVXPPPPKKXXPRXXTXXXAXX 711
P P PP PP + P P PP PP P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 712 PPPPP 726
PP P
Sbjct: 184 PPSAP 188
Score = 26.2 bits (55), Expect = 7.5
Identities = 16/52 (30%), Positives = 17/52 (32%), Gaps = 5/52 (9%)
Frame = +1
Query: 613 PFXXPPPPPXXRVXPPPPKKXXPRXXTXXXAXXPP-----PPPPXXXLPPXQ 753
P PP P + PP P A PP PP P PP Q
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQ 176
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 41.5 bits (93), Expect = 2e-04
Identities = 25/63 (39%), Positives = 25/63 (39%)
Frame = +1
Query: 541 PPPPPPXKXXFXXPPXAXXXGXPFPFXXPPPPPXXRVXPPPPKKXXPRXXTXXXAXXPPP 720
PPPPPP P A P P PPP P PPPP P PPP
Sbjct: 732 PPPPPPA---VIVPTPA-----PAPIPVPPPAPIMGGPPPPPP---PPGVAGAGPPPPPP 780
Query: 721 PPP 729
PPP
Sbjct: 781 PPP 783
Score = 39.1 bits (87), Expect = 0.001
Identities = 23/67 (34%), Positives = 23/67 (34%), Gaps = 4/67 (5%)
Frame = +1
Query: 535 PXPPP----PPPXKXXFXXPPXAXXXGXPFPFXXPPPPPXXRVXPPPPKKXXPRXXTXXX 702
P PPP P P PP A G P P PPPP PPPP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPP--PPPPPGVAGAGPPPPPPPPPAVSAGGS 790
Query: 703 AXXPPPP 723
P P
Sbjct: 791 RYYAPAP 797
Score = 31.5 bits (68), Expect = 0.20
Identities = 23/68 (33%), Positives = 23/68 (33%), Gaps = 3/68 (4%)
Frame = +1
Query: 457 KXXAAPPPGX---KPXXWXXXXXPPLXFXPXPPPPPPXKXXFXXPPXAXXXGXPFPFXXP 627
K PPP P PP PPPPPP PP G P P
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP-------PPGVAGAGPP-----P 777
Query: 628 PPPPXXRV 651
PPPP V
Sbjct: 778 PPPPPPAV 785
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 25.0 bits (52), Expect(3) = 0.062
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1
Query: 517 PPLXFXPXPPPPPP 558
P + P PPPPPP
Sbjct: 899 PTIITHPTPPPPPP 912
Score = 23.4 bits (48), Expect(3) = 0.062
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 9/52 (17%)
Frame = +1
Query: 535 PXPPPPPPXK---XXFXXPPXAXXXGXP------FPFXXPPPPPXXRVXPPP 663
P PPPP P K F P P PPPPP PPP
Sbjct: 907 PPPPPPLPVKTSLNTFSHPDSVNIVANDTSVAGVMPAFPPPPPP-----PPP 953
Score = 21.4 bits (43), Expect(3) = 0.062
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 712 PPPPPPXXXL 741
PPPPPP L
Sbjct: 945 PPPPPPPPPL 954
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 33.1 bits (72), Expect = 0.066
Identities = 27/94 (28%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Frame = +1
Query: 469 APPPGXKPXXWXXXXXP-PLXFXPXPPPPPPXKXXFXXPPXAXXXGXPFPFXXPPPPPXX 645
+PPP +P P + P PPPPPP A P +
Sbjct: 166 SPPPSFQPPSAAAPATSLPSDYNPPPPPPPPP----AVEDQAADANEPDDYY----SSGR 217
Query: 646 RVXPPPPKKXXPRXXTXXXAXXPPPPPPXXXLPP 747
V P P P+ A PPPPP LPP
Sbjct: 218 AVSPEIPPTYTPKQADPLPA---PPPPPPPTLPP 248
Score = 27.9 bits (59), Expect = 2.5
Identities = 29/127 (22%), Positives = 33/127 (25%), Gaps = 8/127 (6%)
Frame = +1
Query: 328 PXGGXKPPXXTPPPXQXPXXXKKKTPXXXPXKIXXKXX----PXXXGKXXAAPPPGXKPX 495
P +PP P P P P + + P A P P
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPT 226
Query: 496 XWXXXXXPPLXFXPXPPPP---PPXKXXFXXP-PXAXXXGXPFPFXXPPPPPXXRVXPPP 663
+ PL P PPPP P P P PPPP P P
Sbjct: 227 -YTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRP 285
Query: 664 PKKXXPR 684
P R
Sbjct: 286 PTNASTR 292
Score = 25.8 bits (54), Expect = 10.0
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 711 PXPPPPXXXPPPXTXXQKXPPXS 779
P PPPP PP T + P S
Sbjct: 238 PPPPPPPTLPPQSTNTSQLPMPS 260
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.5 bits (68), Expect = 0.20
Identities = 19/47 (40%), Positives = 20/47 (42%)
Frame = -1
Query: 746 GGRXXXGGGGGGXXAXXXVXXRGXXFXGGGGXTRXXGGGGGXXXGKG 606
GGR GGG GG RG G GG GG GG G+G
Sbjct: 23 GGRGGFGGGRGGARG----GGRGGARGGRGGRGGARGGRGGSSGGRG 65
Score = 29.1 bits (62), Expect = 1.1
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
Frame = -3
Query: 747 GGEGXXRGGGGXXXRXXXGXXAXXXFFXGGGXNPXXGWGGGXXKXEGGXPXXRXG-GGXK 571
GG G RGG G G GGG G GG GG G GG K
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAK 68
Score = 25.8 bits (54), Expect = 10.0
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -1
Query: 746 GGRXXXGGGGGGXXAXXXVXXRGXXFXGGGGXTRXXGGGGGXXXGKGXPXHXAXGG 579
GGR GG GG RG G G GG G G A GG
Sbjct: 16 GGRGGFNGGRGGFGGGRG-GARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 30.7 bits (66), Expect = 0.35
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +2
Query: 344 NPPXXPPPPNKXPXGXKKKPPXXXPXKXXXXKXPXXXG 457
NPP PPPP P PP K K P G
Sbjct: 8 NPPPPPPPPGFEPPSQPPPPPPPGYVKKRKNKTPAQSG 45
Score = 25.8 bits (54), Expect = 10.0
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = +1
Query: 613 PFXXPPPPPXXRVXPPPPKKXXPRXXTXXXAXXPPPPPP 729
P PPPP PPPP P + PPPPPP
Sbjct: 5 PPGNPPPP------PPPPGFEPP-------SQPPPPPPP 30
Score = 25.8 bits (54), Expect = 10.0
Identities = 11/32 (34%), Positives = 12/32 (37%)
Frame = +3
Query: 711 PXPPPPXXXPPPXTXXQKXPPXSFQKXTLSPP 806
P PPPP PP PP +K P
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPPGYVKKRKNKTP 41
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 29.9 bits (64), Expect = 0.61
Identities = 26/100 (26%), Positives = 29/100 (29%), Gaps = 9/100 (9%)
Frame = +1
Query: 472 PPPGXKPXXWXXXXXPPLXFXPXP--PPPPPXKXXFXXPPXAXXXGXPFPFXXPPP---P 636
PPP PP+ P PPPP P P PPP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 267
Query: 637 PXXRVXPPP----PKKXXPRXXTXXXAXXPPPPPPXXXLP 744
P + PPP P + P PPPP P
Sbjct: 268 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 307
Score = 25.8 bits (54), Expect = 10.0
Identities = 25/112 (22%), Positives = 28/112 (25%), Gaps = 4/112 (3%)
Frame = +1
Query: 310 GGNFPXPXGGXKPPXXTPPPXQX--PXXXKKKTPXXXPXKIXXKXXPXXXGKXXAAPPPG 483
G + P P +P PPP P P P PPP
Sbjct: 230 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Query: 484 XKPXXWXXXXXPPLXFXPXP--PPPPPXKXXFXXPPXAXXXGXPFPFXXPPP 633
PP+ P PPPP P P PPP
Sbjct: 290 MHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.5 bits (63), Expect = 0.81
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +1
Query: 628 PPPPXXRVXPPPPKKXXPRXXTXXXAXXPPPPPPXXXLPP 747
PP P V P PK + P PP P LPP
Sbjct: 1448 PPAPMHAVAPVQPKAPGMVTNAPAPSSAPAPPAPVSQLPP 1487
Score = 29.1 bits (62), Expect = 1.1
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +1
Query: 517 PPLXFXPXPPPPPPXKXXFXXPPXAXXXGXPFPFXXPPPPP 639
PP P PPPPP PP A P PPP P
Sbjct: 1699 PPQMSAPTPPPPP---MSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 28.3 bits (60), Expect = 1.9
Identities = 17/61 (27%), Positives = 18/61 (29%)
Frame = +1
Query: 541 PPPPPPXKXXFXXPPXAXXXGXPFPFXXPPPPPXXRVXPPPPKKXXPRXXTXXXAXXPPP 720
P PP + PP P P PPPP P P P A P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPN 1745
Query: 721 P 723
P
Sbjct: 1746 P 1746
Score = 27.5 bits (58), Expect = 3.3
Identities = 14/41 (34%), Positives = 14/41 (34%), Gaps = 2/41 (4%)
Frame = +1
Query: 613 PFXXPPPPPXXRVXPPPPKKXXPRXXTXXXAXXPP--PPPP 729
P PP PPPP P PP PPPP
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 25.8 bits (54), Expect = 10.0
Identities = 12/38 (31%), Positives = 13/38 (34%)
Frame = +1
Query: 631 PPPXXRVXPPPPKKXXPRXXTXXXAXXPPPPPPXXXLP 744
PP PPPP P + PP P LP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 24.6 bits (51), Expect(2) = 0.91
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +1
Query: 523 LXFXPXPPPPPP 558
+ + P PPPPPP
Sbjct: 366 ISYSPPPPPPPP 377
Score = 23.0 bits (47), Expect(2) = 0.91
Identities = 9/26 (34%), Positives = 11/26 (42%)
Frame = +1
Query: 541 PPPPPPXKXXFXXPPXAXXXGXPFPF 618
PPPPPP + P P+ F
Sbjct: 371 PPPPPPPELLNHSPKSRPLGDKPYLF 396
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 29.1 bits (62), Expect = 1.1
Identities = 14/40 (35%), Positives = 16/40 (40%)
Frame = +1
Query: 541 PPPPPPXKXXFXXPPXAXXXGXPFPFXXPPPPPXXRVXPP 660
PPPPPP + PP A P + PP PP
Sbjct: 206 PPPPPPQQNY---PPAASSSAPPMQYQQTAYPPQQAPYPP 242
Score = 26.2 bits (55), Expect = 7.5
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +3
Query: 711 PXPPPPXXXPPPXTXXQKXPPXSFQKXTLSPP 806
P PPPP PP PP +Q+ T PP
Sbjct: 206 PPPPPPQQNYPP-AASSSAPPMQYQQ-TAYPP 235
Score = 25.8 bits (54), Expect = 10.0
Identities = 14/42 (33%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Frame = +1
Query: 625 PPPPPXXRVXPPPPKKXXPRXXTXXXAXXP--PPPPPXXXLP 744
PPPPP + PP P A P P PP P
Sbjct: 206 PPPPPPQQNYPPAASSSAPPMQYQQTAYPPQQAPYPPVQAYP 247
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 29.1 bits (62), Expect = 1.1
Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 2/59 (3%)
Frame = -3
Query: 747 GGEGXXRGGGGXXXRXXXGXXAXXXFFXG--GGXNPXXGWGGGXXKXEGGXPXXRXGGG 577
GGEG GG G G F G GG G GG GG P G G
Sbjct: 214 GGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 25.8 bits (54), Expect = 10.0
Identities = 28/83 (33%), Positives = 28/83 (33%), Gaps = 3/83 (3%)
Frame = -2
Query: 586 GGGXXKXFXG-GGGGGGXXKKXGGGXXXGAXXXVXPPVXGPPXFSPXXGXF--XXXXFXG 416
GGG F G GGG GG GG G G F G F F G
Sbjct: 187 GGG----FGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGG 242
Query: 415 GPXXGFFFXXXXXFVXGGGXXGG 347
GP G F F G G GG
Sbjct: 243 GP--GGFGGGLGGFGGGPGGFGG 263
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.9 bits (59), Expect = 2.5
Identities = 19/56 (33%), Positives = 22/56 (39%)
Frame = -1
Query: 746 GGRXXXGGGGGGXXAXXXVXXRGXXFXGGGGXTRXXGGGGGXXXGKGXPXHXAXGG 579
GGR GG GG RG G GG +R GGG +G + GG
Sbjct: 138 GGRGGFRGGRGGSRGGFGGNSRG----GFGGGSRGGFGGGSRGGSRGGFRGGSRGG 189
Score = 26.6 bits (56), Expect = 5.7
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = -3
Query: 747 GGEGXXRGGGGXXXRXXXGXXAXXXFFXGGGXNPXXGWGGG 625
GG G RGG G R G + F G G+ GG
Sbjct: 145 GGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGG 185
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,130,667
Number of Sequences: 5004
Number of extensions: 38495
Number of successful extensions: 507
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 292
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 539240220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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