Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_P10
(856 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S56138-1|AAA14245.1| 748|Homo sapiens choline acetyltransferase... 31 4.0
S45018-1|AAB23557.2| 559|Homo sapiens choline acetyltransferase... 31 4.0
BC130617-1|AAI30618.1| 630|Homo sapiens CHAT protein protein. 31 4.0
BC130615-1|AAI30616.1| 630|Homo sapiens CHAT protein protein. 31 4.0
AF305909-1|AAK08955.1| 630|Homo sapiens choline acetyltransfera... 31 4.0
AF305908-1|AAK08954.1| 666|Homo sapiens choline acetyltransfera... 31 4.0
AF305907-1|AAK08953.1| 748|Homo sapiens choline acetyltransfera... 31 4.0
AF305906-3|AAK08952.1| 630|Homo sapiens choline acetyltransfera... 31 4.0
AF305906-2|AAK08951.1| 666|Homo sapiens choline acetyltransfera... 31 4.0
AF305906-1|AAK08950.1| 748|Homo sapiens choline acetyltransfera... 31 4.0
>S56138-1|AAA14245.1| 748|Homo sapiens choline acetyltransferase
protein.
Length = 748
Score = 31.5 bits (68), Expect = 4.0
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 162 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDKTMMDSLEKL 293
RKI + A N L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 334 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 381
>S45018-1|AAB23557.2| 559|Homo sapiens choline acetyltransferase
protein.
Length = 559
Score = 31.5 bits (68), Expect = 4.0
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 162 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDKTMMDSLEKL 293
RKI + A N L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 224 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 271
>BC130617-1|AAI30618.1| 630|Homo sapiens CHAT protein protein.
Length = 630
Score = 31.5 bits (68), Expect = 4.0
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 162 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDKTMMDSLEKL 293
RKI + A N L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 216 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263
>BC130615-1|AAI30616.1| 630|Homo sapiens CHAT protein protein.
Length = 630
Score = 31.5 bits (68), Expect = 4.0
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 162 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDKTMMDSLEKL 293
RKI + A N L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 216 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263
>AF305909-1|AAK08955.1| 630|Homo sapiens choline acetyltransferase
isoform R protein.
Length = 630
Score = 31.5 bits (68), Expect = 4.0
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 162 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDKTMMDSLEKL 293
RKI + A N L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 216 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263
>AF305908-1|AAK08954.1| 666|Homo sapiens choline acetyltransferase
isoform S protein.
Length = 666
Score = 31.5 bits (68), Expect = 4.0
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 162 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDKTMMDSLEKL 293
RKI + A N L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 252 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 299
>AF305907-1|AAK08953.1| 748|Homo sapiens choline acetyltransferase
isoform M protein.
Length = 748
Score = 31.5 bits (68), Expect = 4.0
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 162 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDKTMMDSLEKL 293
RKI + A N L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 334 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 381
>AF305906-3|AAK08952.1| 630|Homo sapiens choline acetyltransferase
isoform R protein.
Length = 630
Score = 31.5 bits (68), Expect = 4.0
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 162 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDKTMMDSLEKL 293
RKI + A N L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 216 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263
>AF305906-2|AAK08951.1| 666|Homo sapiens choline acetyltransferase
isoform S protein.
Length = 666
Score = 31.5 bits (68), Expect = 4.0
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 162 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDKTMMDSLEKL 293
RKI + A N L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 252 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 299
>AF305906-1|AAK08950.1| 748|Homo sapiens choline acetyltransferase
isoform M protein.
Length = 748
Score = 31.5 bits (68), Expect = 4.0
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 162 RKITRSAGNPQGDT----LVTSLGTNKWGEARSLALWDKTMMDSLEKL 293
RKI + A N L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 334 RKIVKMASNEDERLPPIGLLTSDGRSEWAEARTVLVKDSTNRDSLDMI 381
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,513,221
Number of Sequences: 237096
Number of extensions: 2542229
Number of successful extensions: 5658
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5591
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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