Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_P08
(889 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024200-11|AAF36000.1| 271|Caenorhabditis elegans Hypothetical... 30 2.5
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 25 2.8
Z92782-12|CAH60765.1| 328|Caenorhabditis elegans Hypothetical p... 29 4.4
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 25 5.7
U88172-5|AAB42260.1| 483|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 25 6.2
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical p... 28 7.8
Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical p... 28 7.8
Z72502-7|CAA96592.1| 140|Caenorhabditis elegans Hypothetical pr... 28 7.8
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 28 7.8
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 7.8
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 28 7.8
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 28 7.8
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 28 7.8
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 28 7.8
AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical ... 28 7.8
>AC024200-11|AAF36000.1| 271|Caenorhabditis elegans Hypothetical
protein Y71F9AL.6 protein.
Length = 271
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 395 LRSYLNSIRHFYIYYVTLCYVVPRLY**YLTYHSHCLSQSDRVHI-LLYTIFQIMLAXNI 571
++S + I H YI Y Y + ++Y Y YH + ++S HI +Y I+ I + +
Sbjct: 18 IKSTIYYIYHIYIPYTI--YTIHQIYHIYYIYHIYTYTKSPIYHIHHIYQIYHIHIINTL 75
Query: 572 ELV 580
++
Sbjct: 76 YII 78
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 25.4 bits (53), Expect(2) = 2.8
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 639 PPPXXPPPPXP 671
PPP PPPP P
Sbjct: 1338 PPPPPPPPPPP 1348
Score = 22.6 bits (46), Expect(2) = 2.8
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 645 PXXPPPPXPP 674
P PPPP PP
Sbjct: 1354 PVPPPPPPPP 1363
>Z92782-12|CAH60765.1| 328|Caenorhabditis elegans Hypothetical
protein F14F8.13 protein.
Length = 328
Score = 29.1 bits (62), Expect = 4.4
Identities = 9/38 (23%), Positives = 22/38 (57%)
Frame = +3
Query: 444 HYVMWFLDYISNI*HTTVIAFLRVTECIYYYIPYFKLC 557
H +++ L ++++ + FL + ++ Y+P+F LC
Sbjct: 121 HVILFLLAILNSLKYIFSFLFLNIQSSVHKYLPHFTLC 158
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 24.6 bits (51), Expect(2) = 5.7
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -1
Query: 673 GGXGGGGXXGGG 638
GG GGGG GGG
Sbjct: 89 GGNGGGGRGGGG 100
Score = 22.6 bits (46), Expect(2) = 5.7
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 664 GGGGXXGGGXNS 629
GGGG GGG N+
Sbjct: 110 GGGGNWGGGGNN 121
>U88172-5|AAB42260.1| 483|Caenorhabditis elegans Hypothetical
protein ZK354.8 protein.
Length = 483
Score = 28.7 bits (61), Expect = 5.9
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3
Query: 630 LFXPPPXXPPPPXPP 674
+ PPP PPPP PP
Sbjct: 89 MMLPPPSDPPPPPPP 103
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 24.6 bits (51), Expect(2) = 6.2
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -1
Query: 673 GGXGGGGXXGGG 638
GG GGGG GGG
Sbjct: 795 GGSGGGGGGGGG 806
Score = 22.2 bits (45), Expect(2) = 6.2
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 664 GGGGXXGGGXN 632
GGGG GGG N
Sbjct: 821 GGGGGNGGGGN 831
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 639 PPPXXPPPPXPP 674
PPP PPPP PP
Sbjct: 357 PPPPPPPPPPPP 368
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 639 PPPXXPPPPXPP 674
PPP PPPP PP
Sbjct: 358 PPPPPPPPPPPP 369
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 639 PPPXXPPPPXPP 674
PPP PPPP PP
Sbjct: 359 PPPPPPPPPPPP 370
>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
protein K02E2.2 protein.
Length = 1021
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 639 PPPXXPPPPXPP 674
PPP PPPP PP
Sbjct: 787 PPPPVPPPPPPP 798
>Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical
protein F32D8.7b protein.
Length = 380
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 639 PPPXXPPPPXPP 674
PPP PPPP PP
Sbjct: 242 PPPTTPPPPPPP 253
>Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical
protein F32D8.7a protein.
Length = 378
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 639 PPPXXPPPPXPP 674
PPP PPPP PP
Sbjct: 240 PPPTTPPPPPPP 251
>Z72502-7|CAA96592.1| 140|Caenorhabditis elegans Hypothetical
protein C08B6.10 protein.
Length = 140
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 639 PPPXXPPPPXPP 674
PPP PPPP PP
Sbjct: 121 PPPWGPPPPGPP 132
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 639 PPPXXPPPPXPP 674
PPP PPPP PP
Sbjct: 135 PPPPSPPPPPPP 146
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 639 PPPXXPPPPXPP 674
PPP PPPP PP
Sbjct: 136 PPPSPPPPPPPP 147
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 639 PPPXXPPPPXPP 674
PPP PPPP PP
Sbjct: 58 PPPMCPPPPPPP 69
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 639 PPPXXPPPPXPP 674
PPP PPPP PP
Sbjct: 67 PPPICPPPPPPP 78
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 639 PPPXXPPPPXPP 674
PPP PPPP PP
Sbjct: 2 PPPPPPPPPPPP 13
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 639 PPPXXPPPPXPP 674
PPP PPPP PP
Sbjct: 3 PPPPPPPPPPPP 14
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 639 PPPXXPPPPXPP 674
PPP PPPP PP
Sbjct: 4 PPPPPPPPPPPP 15
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 639 PPPXXPPPPXPP 674
PPP PPPP PP
Sbjct: 5 PPPPPPPPPPPP 16
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 639 PPPXXPPPPXPP 674
PPP PPPP PP
Sbjct: 6 PPPPPPPPPPPP 17
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 639 PPPXXPPPPXPP 674
PPP PPPP PP
Sbjct: 2 PPPPPPPPPPPP 13
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 639 PPPXXPPPPXPP 674
PPP PPPP PP
Sbjct: 3 PPPPPPPPPPPP 14
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 639 PPPXXPPPPXPP 674
PPP PPPP PP
Sbjct: 4 PPPPPPPPPPPP 15
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 639 PPPXXPPPPXPP 674
PPP PPPP PP
Sbjct: 5 PPPPPPPPPPPP 16
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 639 PPPXXPPPPXPP 674
PPP PPPP PP
Sbjct: 6 PPPPPPPPPPPP 17
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 639 PPPXXPPPPXPP 674
PPP PPPP PP
Sbjct: 512 PPPPPPPPPPPP 523
>AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical
protein Y52B11A.5 protein.
Length = 219
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 639 PPPXXPPPPXPP 674
PPP PPPP PP
Sbjct: 29 PPPARPPPPPPP 40
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,732,082
Number of Sequences: 27780
Number of extensions: 266331
Number of successful extensions: 2134
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1878
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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