Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_P07
         (855 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0141 - 937428-937717,938483-938705                               32   0.67 
11_06_0369 - 22760383-22760440,22761410-22761497,22761582-227616...    29   4.7  
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677...    28   8.3  
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332...    28   8.3  

>05_01_0141 - 937428-937717,938483-938705
          Length = 170

 Score = 31.9 bits (69), Expect = 0.67
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +1

Query: 661 GXFXFPXXKKXPPPPXXXGGGXGFPP 738
           G +  P     PPPP   GGG G+PP
Sbjct: 37  GYYPPPPTAYPPPPPAGYGGGYGYPP 62


>11_06_0369 -
           22760383-22760440,22761410-22761497,22761582-22761649,
           22761742-22761858,22761964-22762084,22762172-22762247,
           22762336-22762435,22762524-22762615,22763514-22763664,
           22764698-22764792,22764900-22765193
          Length = 419

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 5/40 (12%)
 Frame = +3

Query: 624 PPPPXEKGXF---XXGXFSXSPXKKXPPPPXF--XGGGXG 728
           PPPP E+G          S SP    PPPP     GGG G
Sbjct: 28  PPPPVEEGDADADAGAASSESPATPPPPPPLMAALGGGGG 67


>01_07_0188 -
           41866689-41866763,41866889-41867155,41867277-41867722,
           41867945-41868033,41868279-41868368,41868661-41868739,
           41868979-41869042,41869597-41869684,41869776-41869836,
           41869906-41869969,41870134-41870188,41870275-41870346,
           41870469-41870551,41870629-41870724,41871279-41871383,
           41872159-41872227,41872470-41872561,41872667-41872886
          Length = 704

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 748 PLXXXENPXPPPXKXGGGGXFFXGEXEKXP 659
           P    ++P PP    GGGG F+ G   + P
Sbjct: 11  PPPPPQHPPPPQAGGGGGGEFYRGPPPQPP 40


>01_01_0446 +
           3321832-3322232,3322398-3322455,3322810-3323748,
           3324504-3324654,3324740-3324818,3325826-3325934
          Length = 578

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = -2

Query: 779 PRXXGEXXXXPLXXGGKPXPPPXKXGGGG 693
           P   G     P+  GG P  PP   GGGG
Sbjct: 376 PSYDGGYGGRPMPGGGGPGAPPPYHGGGG 404


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,408,122
Number of Sequences: 37544
Number of extensions: 273534
Number of successful extensions: 981
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)