Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_P07
         (855 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003151-19|AAK18922.1|  988|Caenorhabditis elegans Hypothetical...    30   2.4  
Z81466-2|CAC42256.1|  954|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z81466-1|CAB03869.1|  982|Caenorhabditis elegans Hypothetical pr...    29   4.2  
AJ133374-1|CAB40208.1|  954|Caenorhabditis elegans lin-10 protei...    29   4.2  
Z78013-8|CAN99686.1|  373|Caenorhabditis elegans Hypothetical pr...    28   7.4  
AF067609-10|AAC17537.1|  163|Caenorhabditis elegans Ground-like ...    28   9.7  

>AF003151-19|AAK18922.1|  988|Caenorhabditis elegans Hypothetical
           protein D1007.7 protein.
          Length = 988

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
 Frame = +3

Query: 624 PPPPXEKGXFXXGXFSXSPX---KKXPPPPXFXGGGXG 728
           PPPP  +G      F   P       PPPP F GG  G
Sbjct: 756 PPPPFGRGAGPMSSFPPPPRGGMHHMPPPPSFRGGRGG 793


>Z81466-2|CAC42256.1|  954|Caenorhabditis elegans Hypothetical
           protein C09H6.2b protein.
          Length = 954

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -3

Query: 727 PXPPPXKXGGGGXFFXGEXEKXPXXKXP 644
           P PPP K GG G    GE ++ P    P
Sbjct: 27  PTPPPSKGGGAGGGGGGEQQQVPFQMIP 54


>Z81466-1|CAB03869.1|  982|Caenorhabditis elegans Hypothetical
           protein C09H6.2a protein.
          Length = 982

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -3

Query: 727 PXPPPXKXGGGGXFFXGEXEKXPXXKXP 644
           P PPP K GG G    GE ++ P    P
Sbjct: 27  PTPPPSKGGGAGGGGGGEQQQVPFQMIP 54


>AJ133374-1|CAB40208.1|  954|Caenorhabditis elegans lin-10 protein
           protein.
          Length = 954

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -3

Query: 727 PXPPPXKXGGGGXFFXGEXEKXPXXKXP 644
           P PPP K GG G    GE ++ P    P
Sbjct: 27  PTPPPSKGGGAGGGGGGEQQQVPFQMIP 54


>Z78013-8|CAN99686.1|  373|Caenorhabditis elegans Hypothetical
           protein F15B9.10 protein.
          Length = 373

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -2

Query: 737 GGKPXPPPXKXGGGG 693
           GG P PPP + GGGG
Sbjct: 269 GGYPQPPPQQGGGGG 283


>AF067609-10|AAC17537.1|  163|Caenorhabditis elegans Ground-like
           (grd related) protein20 protein.
          Length = 163

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +1

Query: 667 FXFPXXKKXPPPPXXXGGGXG 729
           F  P  K  PPPP   GGG G
Sbjct: 55  FNVPTLKLPPPPPPPCGGGCG 75


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,748,877
Number of Sequences: 27780
Number of extensions: 134296
Number of successful extensions: 424
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 355
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)