Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_P05
(915 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 36 0.046
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 35 0.11
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.18
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 34 0.18
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.56
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 32 0.74
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 32 0.74
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 32 0.74
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 32 0.74
SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41) 31 1.7
SB_6245| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_51714| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_38893| Best HMM Match : UMPH-1 (HMM E-Value=2.3e-21) 29 4.0
SB_25368| Best HMM Match : PID (HMM E-Value=2.7e-22) 29 4.0
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 29 4.0
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 29 5.2
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 29 6.9
SB_14859| Best HMM Match : SEA (HMM E-Value=0.01) 29 6.9
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_33872| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.2
SB_8338| Best HMM Match : PA (HMM E-Value=5.7e-10) 28 9.2
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 35.9 bits (79), Expect = 0.046
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = +1
Query: 697 PXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
P S P P P PPPP P P P PP P P PP
Sbjct: 375 PPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPP 427
Score = 33.9 bits (74), Expect = 0.18
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +1
Query: 697 PXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
P P P P PPPP P P P PP P P PP
Sbjct: 366 PPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPP 418
Score = 32.7 bits (71), Expect = 0.43
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +1
Query: 697 PXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
P P P P PP P P P P PP PAP PP
Sbjct: 371 PPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPP 423
Score = 32.3 bits (70), Expect = 0.56
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = +1
Query: 697 PXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
P P P P PPPP P S P P PP P P PP
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPS--PPPPPQPPPPPPPPPPPPPPPPPPPPP 415
Score = 32.3 bits (70), Expect = 0.56
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +1
Query: 697 PXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
P P P P SPPPP P P PP P P PP
Sbjct: 374 PPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPP 426
Score = 32.3 bits (70), Expect = 0.56
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = +1
Query: 697 PXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTP 852
P P +P P PPPP P P P PP P P P
Sbjct: 381 PPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPP 432
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = +1
Query: 697 PXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
P P +P P PPPP P P P PP P P PP
Sbjct: 370 PPPPPPPSPPPPPP-PPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPP 421
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = +1
Query: 697 PXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
P P P P PPP P P P PP P P PP
Sbjct: 376 PSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPP 428
Score = 29.9 bits (64), Expect = 3.0
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +1
Query: 739 SPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
SPPPP P P P PP P P PP
Sbjct: 364 SPPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPP 402
Score = 29.5 bits (63), Expect = 4.0
Identities = 20/73 (27%), Positives = 20/73 (27%)
Frame = +1
Query: 637 PPPXMPRKKXXXL*NX*XXXPXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFP 816
PPP P P P P P PPPP P P P P
Sbjct: 369 PPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPP 428
Query: 817 PSXXTXTPAPTPP 855
P A PP
Sbjct: 429 PPPPALRLACAPP 441
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 34.7 bits (76), Expect = 0.11
Identities = 19/53 (35%), Positives = 21/53 (39%)
Frame = +1
Query: 697 PXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
P S + P +PPPP P V P P G PPS P P PP
Sbjct: 348 PPSMGMAPPPVGGAAPPPPPPPP--VGGPPPPPPPIEGRPPSSLGNPPPPPPP 398
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/50 (30%), Positives = 18/50 (36%)
Frame = +1
Query: 697 PXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAP 846
P S P P S PPP P + P P+ + PP P P
Sbjct: 299 PPSRGAPPPPPSRGSAPPPPPARMGTAPPPPPPSRSSQRPPPPSRGAPPP 348
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 34.3 bits (75), Expect = 0.14
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = +1
Query: 697 PXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
P + P P P +PPPP P P P PP T P P PP
Sbjct: 350 PTNNPPSPPPPTNNTPPPPPPTNK---PPPPPPPTNGPPPPPPPTNGPPPPPP 399
Score = 32.3 bits (70), Expect = 0.56
Identities = 17/53 (32%), Positives = 19/53 (35%)
Frame = +1
Query: 697 PXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
P + P P PPPP P + P P PP T P P PP
Sbjct: 359 PPTNNTPPPPPPTNKPPPPPPPTN--GPPPPPPPTNGPPPPPPPTNGPPPPPP 409
Score = 29.9 bits (64), Expect = 3.0
Identities = 14/45 (31%), Positives = 16/45 (35%)
Frame = +1
Query: 721 PXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
P P + PPP P + P P PP P P PP
Sbjct: 366 PPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPPPPPP 410
Score = 28.7 bits (61), Expect = 6.9
Identities = 13/45 (28%), Positives = 17/45 (37%)
Frame = +1
Query: 721 PXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
P P + PP P + + P P + PP P P PP
Sbjct: 346 PPPPPTNNPPSPPPPTNNTPPPPPPTNKPPPPPPPTNGPPPPPPP 390
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 33.9 bits (74), Expect = 0.18
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = +1
Query: 697 PXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
P P P P PPPP P P P+ +PP P P P
Sbjct: 110 PPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYP 162
Score = 33.9 bits (74), Expect = 0.18
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = +1
Query: 697 PXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
P P P P PPPP P P P +PP P PP
Sbjct: 173 PYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPPYPPP 225
Score = 31.9 bits (69), Expect = 0.74
Identities = 20/72 (27%), Positives = 22/72 (30%)
Frame = +1
Query: 640 PPXMPRKKXXXL*NX*XXXPXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPP 819
PP P N P + P P P PPPP P P +PP
Sbjct: 100 PPYPPPPPYPPPPNPPYPPPPNAPYPPP-PNPPYPPPPNAPYPPSPNAPYPPPPNPPYPP 158
Query: 820 SXXTXTPAPTPP 855
P P PP
Sbjct: 159 PLYPPPPNPPPP 170
Score = 31.5 bits (68), Expect = 0.98
Identities = 21/62 (33%), Positives = 22/62 (35%)
Frame = +1
Query: 193 PDPFFAQPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGPTLLQXYP 372
P P+ P Y P N PY P Y P N P A Y PP P YP
Sbjct: 105 PPPY--PPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYP 162
Query: 373 FP 378
P
Sbjct: 163 PP 164
Score = 30.3 bits (65), Expect = 2.3
Identities = 23/81 (28%), Positives = 26/81 (32%), Gaps = 1/81 (1%)
Frame = +1
Query: 616 PLXXXANPP-PXMPRKKXXXL*NX*XXXPXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXX 792
P NPP P P N P + P P P PP P P + P
Sbjct: 123 PYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPY--PPPLYPPPPNPPPPNAPYPPPPYP 180
Query: 793 PAXRTGFPPSXXTXTPAPTPP 855
P +PP P P PP
Sbjct: 181 PPPNPPYPP--PPNPPYPPPP 199
Score = 30.3 bits (65), Expect = 2.3
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +1
Query: 697 PXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
P P P P PPPP P P P PP P P PP
Sbjct: 165 PNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNPP--PPNPPYPPPP 215
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 33.9 bits (74), Expect = 0.18
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Frame = +1
Query: 703 SXPLXTPXPKXXSPPPPXPXXSLVSXXPXXP--AXRTGFPPSXXTXTPAPTPP 855
S P P +PPPP P P P A TG PP PA T P
Sbjct: 125 SPPPPPTSPATRAPPPPPPIAPATGGPPPPPPIAPATGGPPPPPPIAPAATVP 177
Score = 29.5 bits (63), Expect = 4.0
Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
Frame = +1
Query: 718 TPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPA---PTPP 855
TP PPPP + P A TG PP PA P PP
Sbjct: 119 TPSQAPSPPPPPTSPATRAPPPPPPIAPATGGPPPPPPIAPATGGPPPP 167
Score = 29.1 bits (62), Expect = 5.2
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = +1
Query: 697 PXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
P P P PPPP + V A + PPS P P PP
Sbjct: 151 PPPPPPIAPATGGPPPPPPIAPAATVPAPAVPLAAASPPPPSGGPPPPPPPPP 203
>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1212
Score = 33.5 bits (73), Expect = 0.24
Identities = 25/77 (32%), Positives = 26/77 (33%), Gaps = 5/77 (6%)
Frame = +1
Query: 637 PPPXMPRKKXXXL*NX*XXXPXSXPLXTPXPKXXSPPPPX-----PXXSLVSXXPXXPAX 801
PPP P + P S P P P PPPP P P PA
Sbjct: 1042 PPPRKPSPPPSAVPIPPPRKP-SPPPSEPAPPPRQPPPPSTSQPVPPPRQPDPIPTNPAH 1100
Query: 802 RTGFPPSXXTXTPAPTP 852
T PP TPAP P
Sbjct: 1101 PTEPPPRQPKPTPAPRP 1117
Score = 31.1 bits (67), Expect = 1.3
Identities = 22/58 (37%), Positives = 24/58 (41%), Gaps = 5/58 (8%)
Frame = +1
Query: 697 PXSXPLXTPXPKXXSPPP---PXPXXSLVSXXPXXPAX--RTGFPPSXXTXTPAPTPP 855
P + PL P P+ SPPP P P S P PA R PPS P P P
Sbjct: 1036 PSAQPL--PPPRKPSPPPSAVPIPPPRKPSPPPSEPAPPPRQPPPPSTSQPVPPPRQP 1091
Score = 29.1 bits (62), Expect = 5.2
Identities = 20/55 (36%), Positives = 20/55 (36%), Gaps = 5/55 (9%)
Frame = +1
Query: 703 SXPLXTPXPKXX--SPPP---PXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTP 852
S P P P SPPP P P S P PA PP T P P P
Sbjct: 1034 SPPSAQPLPPPRKPSPPPSAVPIPPPRKPSPPPSEPAPPPRQPPPPSTSQPVPPP 1088
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 32.3 bits (70), Expect = 0.56
Identities = 15/53 (28%), Positives = 18/53 (33%)
Frame = +1
Query: 697 PXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
P + P P P PP P + P P PP+ P P PP
Sbjct: 58 PAAAPAAPPPPAAAPAAPPPPAAPPAAPPPPPPLPAPPPPPAQPAPQPPPAPP 110
Score = 30.3 bits (65), Expect = 2.3
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = +1
Query: 739 SPPPPXP-XXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
SPPPP P + P PA PP AP PP
Sbjct: 49 SPPPPPPSPPAAAPAAPPPPAAAPAAPPPPAAPPAAPPPP 88
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 31.9 bits (69), Expect = 0.74
Identities = 26/86 (30%), Positives = 29/86 (33%), Gaps = 6/86 (6%)
Frame = +1
Query: 616 PLXXXANPPPXMPRKKXXXL*NX*XXX---PXSXPLXTPXPKXXSPPPPXPXXS---LVS 777
P A PPP P + L P P+ P S PPP P + L
Sbjct: 311 PPPLNATPPPPPPSRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSAPPPPPGRAPQPLGG 370
Query: 778 XXPXXPAXRTGFPPSXXTXTPAPTPP 855
P P R PPS P P PP
Sbjct: 371 PPPPPPGRR---PPSGKINPPPPPPP 393
Score = 29.9 bits (64), Expect = 3.0
Identities = 21/79 (26%), Positives = 25/79 (31%)
Frame = +1
Query: 616 PLXXXANPPPXMPRKKXXXL*NX*XXXPXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXP 795
P + PPP P + S PL P P PPPP + P P
Sbjct: 208 PPERSSGPPPPPPGRGPSQRSLAPPPTGSSRPLPAPPPGENRPPPPMRGPTSGGEPP--P 265
Query: 796 AXRTGFPPSXXTXTPAPTP 852
PP + P P P
Sbjct: 266 PKNAPPPPKRGSSNPPPPP 284
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 31.9 bits (69), Expect = 0.74
Identities = 16/53 (30%), Positives = 20/53 (37%)
Frame = +1
Query: 697 PXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
P P + P +PP P P + + P P T PP PAP P
Sbjct: 176 PPKPPAPSTIPTPPTPPAP-PSPPIPTAPPTPPMPETPLPPGSPHIPPAPLHP 227
Score = 30.3 bits (65), Expect = 2.3
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = +1
Query: 718 TPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
T K + PP P S + P PA PPS T PTPP
Sbjct: 167 TTTTKPETKPPKPPAPSTIPTPPTPPA-----PPSPPIPTAPPTPP 207
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 31.9 bits (69), Expect = 0.74
Identities = 26/86 (30%), Positives = 29/86 (33%), Gaps = 6/86 (6%)
Frame = +1
Query: 616 PLXXXANPPPXMPRKKXXXL*NX*XXX---PXSXPLXTPXPKXXSPPPPXPXXS---LVS 777
P A PPP P + L P P+ P S PPP P + L
Sbjct: 223 PPPLNATPPPPPPSRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSAPPPPPGRAPQPLGG 282
Query: 778 XXPXXPAXRTGFPPSXXTXTPAPTPP 855
P P R PPS P P PP
Sbjct: 283 PPPPPPGRR---PPSGKINPPPPPPP 305
Score = 29.9 bits (64), Expect = 3.0
Identities = 21/79 (26%), Positives = 25/79 (31%)
Frame = +1
Query: 616 PLXXXANPPPXMPRKKXXXL*NX*XXXPXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXP 795
P + PPP P + S PL P P PPPP + P P
Sbjct: 120 PPERSSGPPPPPPGRGPSQRSLAPPPTGSSRPLPAPPPGENRPPPPMRGPTSGGEPP--P 177
Query: 796 AXRTGFPPSXXTXTPAPTP 852
PP + P P P
Sbjct: 178 PKNAPPPPKRGSSNPPPPP 196
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 31.9 bits (69), Expect = 0.74
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Frame = +1
Query: 718 TPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXT---PAPTP 852
TP P PP P P S+ P P T PP+ T P PTP
Sbjct: 246 TPTPHTSIPPTPTPHTSI----PPTPTPHTSIPPTPTPHTSIPPTPTP 289
>SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41)
Length = 638
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/53 (30%), Positives = 19/53 (35%)
Frame = +1
Query: 697 PXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
P P P + PPPP P + P P PP+ P P PP
Sbjct: 452 PSDEPPPLPPDEEKPPPPPAPALPPLPLPPELPGSPGDSPPATSPKQP-PLPP 503
>SB_6245| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 30.3 bits (65), Expect = 2.3
Identities = 14/53 (26%), Positives = 20/53 (37%)
Frame = +1
Query: 697 PXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
P + P P P +P PP P + + P + PP+ P PP
Sbjct: 761 PPAPPQFAPVPPPCAPIPPMPCSAPLPPAPAPFSAAPHLPPAPNISAEPPPPP 813
>SB_51714| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 542
Score = 29.9 bits (64), Expect = 3.0
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +1
Query: 712 LXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRT 807
+ TP P SPPPP P L + P P RT
Sbjct: 362 IPTPPPPPHSPPPPLPVIQL-NPPPARPLERT 392
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 29.5 bits (63), Expect = 4.0
Identities = 17/55 (30%), Positives = 18/55 (32%), Gaps = 4/55 (7%)
Frame = +1
Query: 703 SXPLXTPXPKXXSPPPPXPXXSLV----SXXPXXPAXRTGFPPSXXTXTPAPTPP 855
S P P P +PPPP P P P G P P P PP
Sbjct: 940 SAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPPPPGGSAPPPPPPPPPPPPP 994
Score = 28.7 bits (61), Expect = 6.9
Identities = 14/49 (28%), Positives = 16/49 (32%)
Frame = +1
Query: 709 PLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
P +P PPPP P + P PP P P PP
Sbjct: 910 PSASPPGGSVPPPPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPP 958
>SB_38893| Best HMM Match : UMPH-1 (HMM E-Value=2.3e-21)
Length = 372
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 283 NPNGNGYEPIDNGAYYVDPPQGPTLLQXYPFPWCS 387
N NG+G P + G V+ P P +L+ P W S
Sbjct: 25 NQNGSGISPEEKGPLMVECPGDPLVLERPPPRWSS 59
>SB_25368| Best HMM Match : PID (HMM E-Value=2.7e-22)
Length = 1197
Score = 29.5 bits (63), Expect = 4.0
Identities = 16/46 (34%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = +1
Query: 718 TPXPKXXSPPPPXPXXSLVSXXPXXPAXRT-GFPPSXXTXTPAPTP 852
T P S PPP P + + P RT PP T P P P
Sbjct: 847 TDRPLSPSAPPPLPPRPVGAPPSLPPRPRTRPLPPKSDTPPPPPRP 892
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 29.5 bits (63), Expect = 4.0
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = +1
Query: 697 PXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
P P P P SP PP P P A + PP P PP
Sbjct: 209 PRPPPSPPPPPPPPSPSPPRPPPPPPPSPPRPLAAKLPEPPPIPNMPPTLPPP 261
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 29.1 bits (62), Expect = 5.2
Identities = 15/53 (28%), Positives = 16/53 (30%)
Frame = +1
Query: 697 PXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
P P P P S PPP P + P G P P PP
Sbjct: 690 PPPPPPPPPPPPQPSTPPPPPPSTPPVQQSGAPGSPAGSPSGTSAGNPQQQPP 742
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 29.1 bits (62), Expect = 5.2
Identities = 21/73 (28%), Positives = 22/73 (30%)
Frame = +1
Query: 637 PPPXMPRKKXXXL*NX*XXXPXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFP 816
PPP P L + P P P PPPP P P P P
Sbjct: 694 PPPPPP--PPPPLLSGTLPMPPPPPPPPPGCAGLPPPPPSPQPGCAGLPPPPPP-----P 746
Query: 817 PSXXTXTPAPTPP 855
P P P PP
Sbjct: 747 PPGCAGLPPPPPP 759
Score = 28.7 bits (61), Expect = 6.9
Identities = 20/73 (27%), Positives = 26/73 (35%)
Frame = +1
Query: 637 PPPXMPRKKXXXL*NX*XXXPXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFP 816
PPP +P + L P PL + PPPP P P P+ + G
Sbjct: 679 PPPPLPVIEGSSLSVPPPPPPPPPPLLS-GTLPMPPPPPPPPPGCAGLPPPPPSPQPGC- 736
Query: 817 PSXXTXTPAPTPP 855
+ P P PP
Sbjct: 737 -AGLPPPPPPPPP 748
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 28.7 bits (61), Expect = 6.9
Identities = 13/49 (26%), Positives = 16/49 (32%)
Frame = +1
Query: 709 PLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
P+ P P PPP P ++ P G P P PP
Sbjct: 237 PMGAPPPPHSMPPPGMPPPGMMPPPGFPPMGMPGMGGMPPPGMPPPMPP 285
>SB_14859| Best HMM Match : SEA (HMM E-Value=0.01)
Length = 1776
Score = 28.7 bits (61), Expect = 6.9
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = +1
Query: 742 PPPPXPXXSLVSXXPXXPAXRTGFP--PSXXTXTPAPTPP 855
PPPP P + + P A RT P + T TP T P
Sbjct: 152 PPPPSPPTTTTTTTPETTAPRTTTPETTTPETTTPRTTTP 191
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 28.3 bits (60), Expect = 9.2
Identities = 25/84 (29%), Positives = 31/84 (36%), Gaps = 6/84 (7%)
Frame = +1
Query: 118 LCWLWPTLKTPXKVVENADSVVINDPDPFFAQPTVGNGYE--PIDNRPYIVNPPK-DYNP 288
+C L +TP K N I DP F + + N YE P Y PP Y
Sbjct: 2073 VCVLADGAETPAKAGINRQESRIQDPYTFISILLLQNSYEEGPPSMGRYNTPPPMGQYGA 2132
Query: 289 NGN---GYEPIDNGAYYVDPPQGP 351
G P+ + Y PP GP
Sbjct: 2133 PARPAMGPPPMGSSRYGPPPPMGP 2156
>SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2332
Score = 28.3 bits (60), Expect = 9.2
Identities = 14/52 (26%), Positives = 19/52 (36%)
Frame = +1
Query: 697 PXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTP 852
P P +P PK +PPP + P P + P T P +P
Sbjct: 940 PTPTPPPSPPPKEPTPPPSSKPSPVKEIKPKKPIEKFISRPKPPTPPPVVSP 991
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 28.3 bits (60), Expect = 9.2
Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 7/60 (11%)
Frame = +1
Query: 697 PXSXPLXTPXPKXXSPPPPXP--XXSLVSXXPXXPAXRTGFP-----PSXXTXTPAPTPP 855
P + P TP P +PPPP P P P +T P P+ T PTPP
Sbjct: 894 PPTTPT-TPKPTTPAPPPPLPLAPEPPPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPP 952
Score = 28.3 bits (60), Expect = 9.2
Identities = 17/56 (30%), Positives = 20/56 (35%), Gaps = 4/56 (7%)
Frame = +1
Query: 697 PXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTG----FPPSXXTXTPAPTP 852
P PL P P PPPP P + P P + PP + P P P
Sbjct: 909 PPPLPL-APEPPPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIP 963
>SB_33872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 716
Score = 28.3 bits (60), Expect = 9.2
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +1
Query: 166 NADSVVINDPDPFFAQPTVGNGYEPIDNRPYIVNPPKDYNPNGN 297
N ++ N D + T YEP + P + P Y+P+GN
Sbjct: 52 NTAKIISNTGDVIYKTRTHEKVYEPSEKDPSAIPPFLAYSPSGN 95
>SB_8338| Best HMM Match : PA (HMM E-Value=5.7e-10)
Length = 326
Score = 28.3 bits (60), Expect = 9.2
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +1
Query: 166 NADSVVINDPDPFFAQPTVGNGYEPIDNRPYIVNPPKDYNPNGN 297
N ++ N D + T YEP + P + P Y+P+GN
Sbjct: 143 NTAKIISNTGDVIYKTRTHEKVYEPSEKDPSAIPPFLAYSPSGN 186
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,304,691
Number of Sequences: 59808
Number of extensions: 353410
Number of successful extensions: 1530
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1274
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2645618622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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