Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_P05
(915 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 37 0.023
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 37 0.023
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 37 0.023
AF099927-3|AAZ32795.1| 893|Caenorhabditis elegans Hypothetical ... 34 0.12
AF099927-1|AAZ32794.1| 955|Caenorhabditis elegans Hypothetical ... 34 0.12
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 33 0.22
AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical ... 33 0.28
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.38
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.38
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 33 0.38
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.50
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.50
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.50
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 31 0.87
AF002198-10|AAF99937.1| 471|Caenorhabditis elegans Hypothetical... 31 1.1
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 31 1.5
Z81103-7|CAB03211.3| 579|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z81103-5|CAD56592.2| 550|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z81088-12|CAD56587.2| 579|Caenorhabditis elegans Hypothetical p... 30 2.0
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 30 2.7
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 6.1
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 28 8.1
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 28 8.1
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 28 8.1
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 28 8.1
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 36.7 bits (81), Expect = 0.023
Identities = 26/74 (35%), Positives = 29/74 (39%)
Frame = +1
Query: 634 NPPPXMPRKKXXXL*NX*XXXPXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGF 813
+PPP P K L P P P+ SPPPP P S P PA G
Sbjct: 236 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPP-PTGS----PPPPPAG--GS 288
Query: 814 PPSXXTXTPAPTPP 855
PP +P P PP
Sbjct: 289 PPPPRAGSPPPPPP 302
Score = 36.3 bits (80), Expect = 0.031
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = +1
Query: 721 PXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTP 852
P P+ SPPPP P P G PP T +P P P
Sbjct: 290 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 333
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 3/45 (6%)
Frame = +1
Query: 727 PKXXSPPPPXPXXS---LVSXXPXXPAXRTGFPPSXXTXTPAPTP 852
P SPPPP P L P G PP T +P P P
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 276
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 36.7 bits (81), Expect = 0.023
Identities = 26/74 (35%), Positives = 29/74 (39%)
Frame = +1
Query: 634 NPPPXMPRKKXXXL*NX*XXXPXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGF 813
+PPP P K L P P P+ SPPPP P S P PA G
Sbjct: 257 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPP-PTGS----PPPPPAG--GS 309
Query: 814 PPSXXTXTPAPTPP 855
PP +P P PP
Sbjct: 310 PPPPRAGSPPPPPP 323
Score = 36.3 bits (80), Expect = 0.031
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = +1
Query: 721 PXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTP 852
P P+ SPPPP P P G PP T +P P P
Sbjct: 311 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 354
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 3/45 (6%)
Frame = +1
Query: 727 PKXXSPPPPXPXXS---LVSXXPXXPAXRTGFPPSXXTXTPAPTP 852
P SPPPP P L P G PP T +P P P
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 297
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 36.7 bits (81), Expect = 0.023
Identities = 26/74 (35%), Positives = 29/74 (39%)
Frame = +1
Query: 634 NPPPXMPRKKXXXL*NX*XXXPXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGF 813
+PPP P K L P P P+ SPPPP P S P PA G
Sbjct: 242 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPP-PTGS----PPPPPAG--GS 294
Query: 814 PPSXXTXTPAPTPP 855
PP +P P PP
Sbjct: 295 PPPPRAGSPPPPPP 308
Score = 36.3 bits (80), Expect = 0.031
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = +1
Query: 721 PXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTP 852
P P+ SPPPP P P G PP T +P P P
Sbjct: 296 PPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 339
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 3/45 (6%)
Frame = +1
Query: 727 PKXXSPPPPXPXXS---LVSXXPXXPAXRTGFPPSXXTXTPAPTP 852
P SPPPP P L P G PP T +P P P
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 282
>AF099927-3|AAZ32795.1| 893|Caenorhabditis elegans Hypothetical
protein T04C4.1b protein.
Length = 893
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -2
Query: 215 GWAKNGSGSLITTESAFSTTLXGVLSVGHSQQSEDENHEEFHFYMITSYH 66
GW S S++TT AFS ++ G Q D +H HF +S H
Sbjct: 236 GWRTRTSRSIMTTPEAFSRVRHISITFGEQQHDIDTDHSNQHFGSPSSLH 285
>AF099927-1|AAZ32794.1| 955|Caenorhabditis elegans Hypothetical
protein T04C4.1a protein.
Length = 955
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -2
Query: 215 GWAKNGSGSLITTESAFSTTLXGVLSVGHSQQSEDENHEEFHFYMITSYH 66
GW S S++TT AFS ++ G Q D +H HF +S H
Sbjct: 297 GWRTRTSRSIMTTPEAFSRVRHISITFGEQQHDIDTDHSNQHFGSPSSLH 346
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 33.5 bits (73), Expect = 0.22
Identities = 22/74 (29%), Positives = 24/74 (32%), Gaps = 1/74 (1%)
Frame = +1
Query: 637 PPPXMPRKKXXXL*NX*XXXPXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFP 816
PPP P L N P P PPPP + +S P G
Sbjct: 470 PPPPGPPSSLLPLINTNAPPPPPMPSINGHAPNPPPPPPLLGIAPMSTNAPPPPPMPGMA 529
Query: 817 P-SXXTXTPAPTPP 855
P S TP P PP
Sbjct: 530 PLSTGAPTPPPPPP 543
Score = 28.7 bits (61), Expect = 6.1
Identities = 20/75 (26%), Positives = 22/75 (29%)
Frame = +1
Query: 631 ANPPPXMPRKKXXXL*NX*XXXPXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTG 810
A PPP MP P PL P + PPP P + P
Sbjct: 487 APPPPPMPSINGHA-----PNPPPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPP 541
Query: 811 FPPSXXTXTPAPTPP 855
P P P PP
Sbjct: 542 PPVGMANGGPPPPPP 556
>AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical
protein Y54E2A.8 protein.
Length = 485
Score = 33.1 bits (72), Expect = 0.28
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = +1
Query: 697 PXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
P P+ TP P PPPP P L P PS P P PP
Sbjct: 153 PPPTPIPTPVPILEPPPPPPPVPPL---SPLYKVLEIPATPSPIFVAPLPPPP 202
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.7 bits (71), Expect = 0.38
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = +1
Query: 709 PLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTP 852
P P P PPP P + P P RT PP P P P
Sbjct: 275 PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 322
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 1/54 (1%)
Frame = +1
Query: 697 PXSXPLXTPXPKXXSPPPPXPXXSL-VSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
P P P PPPP S P P R PPS P P PP
Sbjct: 334 PPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 387
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.38
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = +1
Query: 709 PLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTP 852
P P P PPP P + P P RT PP P P P
Sbjct: 285 PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 332
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 1/54 (1%)
Frame = +1
Query: 697 PXSXPLXTPXPKXXSPPPPXPXXSL-VSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
P P P PPPP S P P R PPS P P PP
Sbjct: 344 PPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 397
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 32.7 bits (71), Expect = 0.38
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +1
Query: 718 TPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
+P P PPPP P L P P T P P PP
Sbjct: 1335 SPSPPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPP 1380
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/45 (28%), Positives = 16/45 (35%)
Frame = +1
Query: 718 TPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTP 852
+P P PPPP + V P P + P P P P
Sbjct: 1337 SPPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPP 1381
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.50
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = +1
Query: 697 PXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
P P P PPPP ++ P P G PP P P PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +1
Query: 727 PKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
P PPP P ++ P P G PP T P P PP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPP--ITGGPPPPPP 747
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.50
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = +1
Query: 697 PXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
P P P PPPP ++ P P G PP P P PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +1
Query: 727 PKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
P PPP P ++ P P G PP T P P PP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPP--ITGGPPPPPP 747
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.50
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = +1
Query: 697 PXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
P P P PPPP ++ P P G PP P P PP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 348
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +1
Query: 727 PKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
P PPP P ++ P P G PP T P P PP
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPP--ITGGPPPPPP 330
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 31.5 bits (68), Expect = 0.87
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +1
Query: 721 PXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTP 852
P PK PPP P A R PP T TP P P
Sbjct: 160 PPPKGTGSPPPPPTGEPQDLSTEGNASRRPPPPPKGTGTPPPPP 203
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +1
Query: 721 PXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTP 852
P PK PPP P A R PP T TP P P
Sbjct: 35 PPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPP 78
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +1
Query: 721 PXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTP 852
P PK PPP P A R PP T +P P P
Sbjct: 191 PPPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPPKGTGSPTPPP 234
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +1
Query: 721 PXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTP 852
P PK PPP P A R PP T +P P P
Sbjct: 98 PPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPP 141
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +1
Query: 721 PXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTP 852
P PK PPP P A R PP T +P P P
Sbjct: 129 PPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPP 172
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +1
Query: 721 PXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAP 846
P PK PPP P A R PP T TP P
Sbjct: 253 PPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPP 294
>AF002198-10|AAF99937.1| 471|Caenorhabditis elegans Hypothetical
protein F35F10.12 protein.
Length = 471
Score = 31.1 bits (67), Expect = 1.1
Identities = 27/75 (36%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +1
Query: 190 DPDPFFAQPT-VGNGYEPIDNRPYIVNPPKDYN--PNGNGYEPIDNGAYYVDPPQGPTLL 360
DP+ +QPT +G G P P V PP Y P +G DNGA P GP
Sbjct: 345 DPNLPPSQPTPIGGGVAPAGVAPAGVVPPPGYGFLPMTDG---TDNGAGDTPYPVGPPYP 401
Query: 361 QXYPFPWCSRWEVKN 405
P P+ S E K+
Sbjct: 402 SDVPAPYPSGDEPKD 416
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = +1
Query: 697 PXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
P + P+ P P PPPP P P PP P P PP
Sbjct: 40 PCAAPMPMPMPMPVCPPPPPCPAQFCPPPPICPP-----PPPPPMPCPPPPPP 87
>Z81103-7|CAB03211.3| 579|Caenorhabditis elegans Hypothetical
protein M04G12.4a protein.
Length = 579
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/61 (32%), Positives = 24/61 (39%)
Frame = +1
Query: 169 ADSVVINDPDPFFAQPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQG 348
+ SV+ P QP VGN Y+P P +PP Y GY P G P
Sbjct: 80 SQSVLFEQPQ---IQPLVGNSYDP----PVRFDPPYAYRATATGYMPTVPGLSTNSSPYY 132
Query: 349 P 351
P
Sbjct: 133 P 133
>Z81103-5|CAD56592.2| 550|Caenorhabditis elegans Hypothetical
protein M04G12.4b protein.
Length = 550
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/61 (32%), Positives = 24/61 (39%)
Frame = +1
Query: 169 ADSVVINDPDPFFAQPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQG 348
+ SV+ P QP VGN Y+P P +PP Y GY P G P
Sbjct: 51 SQSVLFEQPQ---IQPLVGNSYDP----PVRFDPPYAYRATATGYMPTVPGLSTNSSPYY 103
Query: 349 P 351
P
Sbjct: 104 P 104
>Z81088-12|CAD56587.2| 579|Caenorhabditis elegans Hypothetical
protein M04G12.4a protein.
Length = 579
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/61 (32%), Positives = 24/61 (39%)
Frame = +1
Query: 169 ADSVVINDPDPFFAQPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQG 348
+ SV+ P QP VGN Y+P P +PP Y GY P G P
Sbjct: 80 SQSVLFEQPQ---IQPLVGNSYDP----PVRFDPPYAYRATATGYMPTVPGLSTNSSPYY 132
Query: 349 P 351
P
Sbjct: 133 P 133
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/53 (28%), Positives = 17/53 (32%)
Frame = +1
Query: 697 PXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
P P P P PPPP P + + PA P P PP
Sbjct: 135 PPPPPHYPPPPPHYPPPPPAPHSAYIDHSAPRPAYIEHSAPPPQPQYPQQQPP 187
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/53 (26%), Positives = 17/53 (32%)
Frame = +1
Query: 697 PXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
P + P PPPP P + P P + P S AP P
Sbjct: 218 PSGTKMPAQPPPQQHPPPPQPQQIMSPMPPQAPPSQQATPSSSAASVAAPDTP 270
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = +1
Query: 697 PXSXPLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTP 852
P PL + + PPPP P +L + P P PS TP P P
Sbjct: 71 PPPPPLISILQQAPPPPPPPPPPTLKA--PPPPPILGLKTPSKSLKTPTPRP 120
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/54 (33%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Frame = +1
Query: 697 PXSXPLXTPXPKXXSP-PPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
P + P P P P P P P + VS P P PP TP+ PP
Sbjct: 459 PPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPP------PPLPPIATPSSVPP 506
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +1
Query: 721 PXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
P P PPPP P P P G PP P PP
Sbjct: 68 PVPNGFIPPPPGPG----GIPPPPPMFAGGIPPPPPMMGGIPPPP 108
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = +1
Query: 709 PLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
PL P + +PPPP P S+ + R P T AP PP
Sbjct: 228 PLAPPPARPAAPPPPVPTPSIAQM-----SSRFQSPAISRTLDDAPPPP 271
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = +1
Query: 709 PLXTPXPKXXSPPPPXPXXSLVSXXPXXPAXRTGFPPSXXTXTPAPTPP 855
PL P + +PPPP P S+ + R P T AP PP
Sbjct: 230 PLAPPPARPAAPPPPVPTPSIAQM-----SSRFQSPAISRTLDDAPPPP 273
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/55 (32%), Positives = 20/55 (36%), Gaps = 2/55 (3%)
Frame = +1
Query: 697 PXSXPLXTPXPKXXSP-PPPXPXXSLVSXXPXXPAXRTGFP-PSXXTXTPAPTPP 855
P + P P P P P P P + VS P P PS P P PP
Sbjct: 466 PPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPP 520
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,319,876
Number of Sequences: 27780
Number of extensions: 288878
Number of successful extensions: 1276
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1155
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -