Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_P04
         (850 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058508-1|AAL13737.1|  522|Drosophila melanogaster LD21426p pro...    85   9e-17
AE014298-3078|AAF50863.1|  522|Drosophila melanogaster CG1753-PB...    85   9e-17
AE014298-3077|AAF50862.1|  522|Drosophila melanogaster CG1753-PA...    85   9e-17

>AY058508-1|AAL13737.1|  522|Drosophila melanogaster LD21426p
           protein.
          Length = 522

 Score = 85.4 bits (202), Expect = 9e-17
 Identities = 54/135 (40%), Positives = 72/135 (53%), Gaps = 3/135 (2%)
 Frame = +2

Query: 455 TLKDMPHIVRALDRNQKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGRIR 634
           T +  PHI R +   Q++  +IL VIG TPLVKL+ +P  +G++CEMYAKCEFLNPG   
Sbjct: 28  TAEKSPHIHRGIAHRQQITPNILEVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSV 87

Query: 635 XRPHSLPHVSGCRXEGYFEAWQVSHSRTHIW*HRNRTGPWPLLS---XGTGAIIXLPEKM 805
                   V     +G  +        T I      TG    ++    G   II +PEKM
Sbjct: 88  KDRIGYRMVQDAEEQGLLKP-----GYTIIEPTSGNTGIGLAMACAVKGYKCIIVMPEKM 142

Query: 806 SDEKVTPLVALGAEI 850
           S+EKV+ L  LGA+I
Sbjct: 143 SNEKVSALRTLGAKI 157



 Score = 64.5 bits (150), Expect = 2e-10
 Identities = 31/47 (65%), Positives = 37/47 (78%)
 Frame = +3

Query: 612 FSTLGGSVXDRIAYRMFLDAXQKGILKPGKSVIVEPTSGNTGIGLAL 752
           F   GGSV DRI YRM  DA ++G+LKPG + I+EPTSGNTGIGLA+
Sbjct: 80  FLNPGGSVKDRIGYRMVQDAEEQGLLKPGYT-IIEPTSGNTGIGLAM 125


>AE014298-3078|AAF50863.1|  522|Drosophila melanogaster CG1753-PB,
           isoform B protein.
          Length = 522

 Score = 85.4 bits (202), Expect = 9e-17
 Identities = 54/135 (40%), Positives = 72/135 (53%), Gaps = 3/135 (2%)
 Frame = +2

Query: 455 TLKDMPHIVRALDRNQKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGRIR 634
           T +  PHI R +   Q++  +IL VIG TPLVKL+ +P  +G++CEMYAKCEFLNPG   
Sbjct: 28  TAEKSPHIHRGIAHRQQITPNILEVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSV 87

Query: 635 XRPHSLPHVSGCRXEGYFEAWQVSHSRTHIW*HRNRTGPWPLLS---XGTGAIIXLPEKM 805
                   V     +G  +        T I      TG    ++    G   II +PEKM
Sbjct: 88  KDRIGYRMVQDAEEQGLLKP-----GYTIIEPTSGNTGIGLAMACAVKGYKCIIVMPEKM 142

Query: 806 SDEKVTPLVALGAEI 850
           S+EKV+ L  LGA+I
Sbjct: 143 SNEKVSALRTLGAKI 157



 Score = 64.5 bits (150), Expect = 2e-10
 Identities = 31/47 (65%), Positives = 37/47 (78%)
 Frame = +3

Query: 612 FSTLGGSVXDRIAYRMFLDAXQKGILKPGKSVIVEPTSGNTGIGLAL 752
           F   GGSV DRI YRM  DA ++G+LKPG + I+EPTSGNTGIGLA+
Sbjct: 80  FLNPGGSVKDRIGYRMVQDAEEQGLLKPGYT-IIEPTSGNTGIGLAM 125


>AE014298-3077|AAF50862.1|  522|Drosophila melanogaster CG1753-PA,
           isoform A protein.
          Length = 522

 Score = 85.4 bits (202), Expect = 9e-17
 Identities = 54/135 (40%), Positives = 72/135 (53%), Gaps = 3/135 (2%)
 Frame = +2

Query: 455 TLKDMPHIVRALDRNQKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGRIR 634
           T +  PHI R +   Q++  +IL VIG TPLVKL+ +P  +G++CEMYAKCEFLNPG   
Sbjct: 28  TAEKSPHIHRGIAHRQQITPNILEVIGCTPLVKLNNIPASDGIECEMYAKCEFLNPGGSV 87

Query: 635 XRPHSLPHVSGCRXEGYFEAWQVSHSRTHIW*HRNRTGPWPLLS---XGTGAIIXLPEKM 805
                   V     +G  +        T I      TG    ++    G   II +PEKM
Sbjct: 88  KDRIGYRMVQDAEEQGLLKP-----GYTIIEPTSGNTGIGLAMACAVKGYKCIIVMPEKM 142

Query: 806 SDEKVTPLVALGAEI 850
           S+EKV+ L  LGA+I
Sbjct: 143 SNEKVSALRTLGAKI 157



 Score = 64.5 bits (150), Expect = 2e-10
 Identities = 31/47 (65%), Positives = 37/47 (78%)
 Frame = +3

Query: 612 FSTLGGSVXDRIAYRMFLDAXQKGILKPGKSVIVEPTSGNTGIGLAL 752
           F   GGSV DRI YRM  DA ++G+LKPG + I+EPTSGNTGIGLA+
Sbjct: 80  FLNPGGSVKDRIGYRMVQDAEEQGLLKPGYT-IIEPTSGNTGIGLAM 125


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,565,120
Number of Sequences: 53049
Number of extensions: 725010
Number of successful extensions: 1432
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1429
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4065385896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)