Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_P02
         (830 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0141 + 1116833-1117082,1117658-1118574,1119417-1119579,111...    29   4.5  
05_01_0499 - 4166891-4166942,4167191-4167510                           29   6.0  
10_08_1048 - 22553676-22554866                                         28   7.9  
08_02_0287 + 15347145-15349604                                         28   7.9  
06_01_0931 + 7192519-7194075                                           28   7.9  
01_06_0065 + 26107522-26107700,26110875-26111253                       28   7.9  

>03_01_0141 +
           1116833-1117082,1117658-1118574,1119417-1119579,
           1119668-1120497,1120562-1120570
          Length = 722

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = -1

Query: 413 CDAELLPEAGNAGPGQAQPV 354
           C A LLPE GN G GQ+  V
Sbjct: 486 CSATLLPEEGNTGDGQSPKV 505


>05_01_0499 - 4166891-4166942,4167191-4167510
          Length = 123

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 19/50 (38%), Positives = 24/50 (48%)
 Frame = -2

Query: 475 LIANALALRSWLLLWNKLTLPATPSCSPKPGMRVPVRLSPCPFTLSRASP 326
           LI   LALR   LL N +     PS SP+   +   R  P P + + ASP
Sbjct: 5   LIIVPLALRGASLLGNAVAAAVVPSSSPEQQQQQQRRPRPPPGSKNGASP 54


>10_08_1048 - 22553676-22554866
          Length = 396

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 18/60 (30%), Positives = 26/60 (43%)
 Frame = -2

Query: 535 STPPPSVLKLGALGMALGEFLIANALALRSWLLLWNKLTLPATPSCSPKPGMRVPVRLSP 356
           ST PP +L       A  E L+    A+R+ +   N L     P   P P + +  RL+P
Sbjct: 47  STAPPLLLPAAHQAQAQDEQLLRQLTAIRATVSQLNHLRSSTPPPPPPPPELLLYSRLAP 106


>08_02_0287 + 15347145-15349604
          Length = 819

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -3

Query: 372 RSGSARARLHCPERAPAEAALSLWRSLKSA 283
           RSG   A     ER P + A ++WRSL SA
Sbjct: 673 RSGKLHAAKEFIERMPIKPAAAVWRSLLSA 702


>06_01_0931 + 7192519-7194075
          Length = 518

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
 Frame = -2

Query: 568 QRCAHLLLNM*STPPPSVLKLGALG-MALGEFLIANALALRSWLLLW-NKLTLPATPSCS 395
           Q CA L  +    PP     L +L   A    ++   +ALR+ +L W ++L+LP     S
Sbjct: 62  QACAALAFS----PPAVAADLSSLPPSASSPLVLVPNVALRTAILNWCDRLSLPYPAPLS 117

Query: 394 PKPGMRVPVRLSPCP 350
           P     V  RL P P
Sbjct: 118 PDTARDVVRRLMPSP 132


>01_06_0065 + 26107522-26107700,26110875-26111253
          Length = 185

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 20/62 (32%), Positives = 28/62 (45%)
 Frame = -1

Query: 656 RASWTRSEQVQLTPGPSSHSG**RQSAXRSTMRPPSVEHVVHSAAQRVEVGRVGNGAGRV 477
           R++W  + Q Q TPG    +         S  R  S EH   S  +  E+G++ NG  R 
Sbjct: 112 RSAWWAT-QTQATPGDGDLAA----RIGESEPRGKSSEH--RSPGEMEEIGKIANGKRRS 164

Query: 476 PD 471
           PD
Sbjct: 165 PD 166


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,068,807
Number of Sequences: 37544
Number of extensions: 397067
Number of successful extensions: 1430
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1429
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2291695380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)