BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP03_F_P02 (830 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_45176| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5 SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0 SB_36998| Best HMM Match : TUDOR (HMM E-Value=0) 29 3.5 SB_6115| Best HMM Match : efhand (HMM E-Value=0.22) 29 3.5 SB_57079| Best HMM Match : DUF1140 (HMM E-Value=3.8) 29 4.6 SB_30201| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6 SB_18707| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6 SB_7444| Best HMM Match : Transposase_1 (HMM E-Value=9.4) 29 4.6 SB_54783| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1 SB_25956| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1 SB_28847| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1 >SB_45176| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 149 Score = 30.7 bits (66), Expect = 1.5 Identities = 20/81 (24%), Positives = 34/81 (41%) Frame = +2 Query: 299 RHKLSAASAGARSGQCKRARAEPDRDPHSRLXXXXXXXXXXXFVPQQQPRPERQGVRDQE 478 +HKL AA A + KR A+ D + R+ + R ++ ++D+ Sbjct: 61 QHKLKAA-ATVKQDNSKRCEADKDEELSKRICWLKQRCNEVDMRWEAAKRKAQRLIQDRA 119 Query: 479 LAQRHSQRAQLQHAGRRSGLH 541 + Q Q + +HA GLH Sbjct: 120 VMQSEIQTIKEKHAEAEEGLH 140 >SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 778 Score = 30.3 bits (65), Expect = 2.0 Identities = 14/40 (35%), Positives = 23/40 (57%) Frame = +2 Query: 434 QQQPRPERQGVRDQELAQRHSQRAQLQHAGRRSGLHVQQK 553 QQQP+P++Q + QE Q+ Q+ Q Q ++ QQ+ Sbjct: 39 QQQPQPQQQQQQQQEQEQQQQQQQQQQQQQQQQQQQQQQQ 78 >SB_36998| Best HMM Match : TUDOR (HMM E-Value=0) Length = 2538 Score = 29.5 bits (63), Expect = 3.5 Identities = 18/50 (36%), Positives = 26/50 (52%) Frame = -2 Query: 505 GALGMALGEFLIANALALRSWLLLWNKLTLPATPSCSPKPGMRVPVRLSP 356 G + M + + LIA A+++ N L +PA S PKP V V+ SP Sbjct: 395 GDMDMQISQILIAAGYAVKTSEFNPNPLRIPAAKSTPPKPA-PVQVQASP 443 >SB_6115| Best HMM Match : efhand (HMM E-Value=0.22) Length = 822 Score = 29.5 bits (63), Expect = 3.5 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%) Frame = +2 Query: 158 HVPTRARRQAGSFTVNS---DGTSGAALKVPLTGNDKNVLSAIGSADFNDRHK 307 HVP + G + NS T G+ + +PL ++K V+ +G ND HK Sbjct: 526 HVP-KVGSHGGVYFWNSFRNKDTDGSLIVLPLKDHEKRVIGLLGVDTLNDSHK 577 >SB_57079| Best HMM Match : DUF1140 (HMM E-Value=3.8) Length = 235 Score = 29.1 bits (62), Expect = 4.6 Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 2/44 (4%) Frame = +2 Query: 434 QQQPRPERQGVRDQELAQRHSQRAQL--QHAGRRSGLHVQQKVG 559 QQQ +P++Q + Q+L Q+ Q+ QL Q ++ L +QQ +G Sbjct: 184 QQQQQPQQQQPQQQQLQQQQLQQQQLQQQQLQQQQMLMMQQFIG 227 >SB_30201| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 177 Score = 29.1 bits (62), Expect = 4.6 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = +2 Query: 434 QQQPRPERQGVRDQELAQRHSQRAQLQHAGRRSGLHVQQKV 556 QQQ +P++Q + Q+L Q+ Q+ QLQ + QQ++ Sbjct: 76 QQQQQPQQQQPQQQQLQQQQLQQQQLQQQQLQQQQQQQQQL 116 Score = 29.1 bits (62), Expect = 4.6 Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 2/44 (4%) Frame = +2 Query: 434 QQQPRPERQGVRDQELAQRHSQRAQL--QHAGRRSGLHVQQKVG 559 QQQ +P++Q + Q+L Q+ Q+ QL Q ++ L +QQ +G Sbjct: 126 QQQQQPQQQQPQQQQLQQQQLQQQQLQQQQLQQQQMLMMQQFIG 169 >SB_18707| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 176 Score = 29.1 bits (62), Expect = 4.6 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = +2 Query: 434 QQQPRPERQGVRDQELAQRHSQRAQLQHAGRRSGLHVQQKV 556 QQQ +P++Q + Q+L Q+ Q+ QLQ + QQ++ Sbjct: 75 QQQQQPQQQQPQQQQLQQQQLQQQQLQQQQLQQQQQQQQQL 115 Score = 29.1 bits (62), Expect = 4.6 Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 2/44 (4%) Frame = +2 Query: 434 QQQPRPERQGVRDQELAQRHSQRAQL--QHAGRRSGLHVQQKVG 559 QQQ +P++Q + Q+L Q+ Q+ QL Q ++ L +QQ +G Sbjct: 125 QQQQQPQQQQPQQQQLQQQQLQQQQLQQQQLQQQQMLMMQQFIG 168 >SB_7444| Best HMM Match : Transposase_1 (HMM E-Value=9.4) Length = 167 Score = 29.1 bits (62), Expect = 4.6 Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 2/44 (4%) Frame = +2 Query: 434 QQQPRPERQGVRDQELAQRHSQRAQL--QHAGRRSGLHVQQKVG 559 QQQ +P++Q + Q+L Q+ Q+ QL Q ++ L +QQ +G Sbjct: 116 QQQQQPQQQQPQQQQLQQQQLQQQQLQQQQLQQQQMLMMQQFIG 159 >SB_54783| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 218 Score = 28.7 bits (61), Expect = 6.1 Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 1/78 (1%) Frame = -3 Query: 429 TN*PCLRRRAAPRSRECGSRSGSARARLHCPERAPAEAALSLWRSL-KSADPMALSTFLS 253 +N PCL +AP + + SA R + P A A A L+ +L +S DP + + Sbjct: 135 SNDPCLATASAPLA------TPSALTRSNDPYLATASAPLATPFALTRSNDPCLATASAT 188 Query: 252 LPVRGTFRAAPEVPSEFT 199 P R T A+ PS+ T Sbjct: 189 APNRHTMLASDIAPSQIT 206 >SB_25956| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1146 Score = 28.3 bits (60), Expect = 8.1 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +2 Query: 434 QQQPRPERQGVRDQELAQRHSQRAQLQHAGRRSGLHVQQK 553 QQQ ++Q R + Q H Q+ Q QH ++ H QQK Sbjct: 1106 QQQQHDQQQQQRHDQQQQHHDQQQQ-QHHDQQQQHHEQQK 1144 >SB_28847| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 201 Score = 28.3 bits (60), Expect = 8.1 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 3/30 (10%) Frame = +3 Query: 603 TTRPGGKLNL---FRSRPARSTSTPGFKKF 683 TT GG L + F PA ST +P FK+F Sbjct: 90 TTNSGGSLKILDPFSRSPALSTKSPAFKRF 119 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,999,185 Number of Sequences: 59808 Number of extensions: 390764 Number of successful extensions: 1164 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 1036 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1153 length of database: 16,821,457 effective HSP length: 81 effective length of database: 11,977,009 effective search space used: 2335516755 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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