Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_P02
         (830 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g48590.1 68418.m06010 expressed protein                             29   3.8  
At4g32300.1 68417.m04596 lectin protein kinase family protein co...    29   5.0  
At5g64360.3 68418.m08085 DNAJ heat shock N-terminal domain-conta...    28   6.6  
At5g64360.2 68418.m08084 DNAJ heat shock N-terminal domain-conta...    28   6.6  
At5g64360.1 68418.m08083 DNAJ heat shock N-terminal domain-conta...    28   6.6  
At5g15150.1 68418.m01775 homeobox-leucine zipper protein 7 (HAT7...    28   6.6  
At4g18120.1 68417.m02694 RNA recognition motif (RRM)-containing ...    28   8.7  

>At5g48590.1 68418.m06010 expressed protein
          Length = 344

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = -3

Query: 414 LRRRAAPRSRECGSRSGSARARLHCPERAPAEAALSLWRSLKS--ADPMALSTFL 256
           LRR A PRS E  S        L  PE +  E+ ++ + SLK    + +A  TFL
Sbjct: 263 LRRCAKPRSHEAKSLIEKQSLALFGPEESSKESIVTSFSSLKRLLLEAVAFGTFL 317


>At4g32300.1 68417.m04596 lectin protein kinase family protein
           contains Pfam domains, PF01453: Lectin (probable mannose
           binding) and PF00069: Protein kinase domain
          Length = 821

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = -3

Query: 435 CGTN*PCLRRRAAPRSRECGSRSGSARARLHC 340
           CGT  PC        S+ CG  SG +RAR  C
Sbjct: 284 CGTPEPCGPYYVCSGSKVCGCVSGLSRARSDC 315


>At5g64360.3 68418.m08085 DNAJ heat shock N-terminal
           domain-containing protein low similarity to AHM1
           [Triticum aestivum] GI:6691467; contains Pfam profile
           PF00226 DnaJ domain
          Length = 464

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = -3

Query: 288 SADPMALSTFLSLPVRGTFRAAPEVPSEFTVKLPACLRARVGTCLP 151
           SADPMA S + + P        P+   E T+K   C RA     +P
Sbjct: 187 SADPMATSFWTACPYCFVLFEYPKAYEECTLKCQECRRAFQAVTIP 232


>At5g64360.2 68418.m08084 DNAJ heat shock N-terminal
           domain-containing protein low similarity to AHM1
           [Triticum aestivum] GI:6691467; contains Pfam profile
           PF00226 DnaJ domain
          Length = 464

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = -3

Query: 288 SADPMALSTFLSLPVRGTFRAAPEVPSEFTVKLPACLRARVGTCLP 151
           SADPMA S + + P        P+   E T+K   C RA     +P
Sbjct: 187 SADPMATSFWTACPYCFVLFEYPKAYEECTLKCQECRRAFQAVTIP 232


>At5g64360.1 68418.m08083 DNAJ heat shock N-terminal
           domain-containing protein low similarity to AHM1
           [Triticum aestivum] GI:6691467; contains Pfam profile
           PF00226 DnaJ domain
          Length = 422

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = -3

Query: 288 SADPMALSTFLSLPVRGTFRAAPEVPSEFTVKLPACLRARVGTCLP 151
           SADPMA S + + P        P+   E T+K   C RA     +P
Sbjct: 187 SADPMATSFWTACPYCFVLFEYPKAYEECTLKCQECRRAFQAVTIP 232


>At5g15150.1 68418.m01775 homeobox-leucine zipper protein 7 (HAT7) /
           HD-ZIP protein 7 / HD-ZIP protein (HB-3) identical to
           homeobox-leucine zipper protein HAT7 (HD-ZIP protein 7)
           (HD-ZIP protein ATHB-3) (SP:Q00466) [Arabidopsis
           thaliana]
          Length = 314

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 480 SPSAIPNAPNFNTLGGGVDYMFNR 551
           SP+++P+ P     GGG +YM NR
Sbjct: 44  SPTSLPSCPPHLFYGGGGNYMMNR 67


>At4g18120.1 68417.m02694 RNA recognition motif (RRM)-containing
           protein Mei2-like protein, Arabidopsis thaliana,
           gb:D86122
          Length = 785

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = +3

Query: 585 TSSTGMTTRPGGKLNLFRSRPARSTSTPGFKKFDTP 692
           TSS G     G   N+   R  R TS+P FK    P
Sbjct: 487 TSSMGSVAFRGASGNMNAQRNLRETSSPNFKMLSAP 522


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,449,601
Number of Sequences: 28952
Number of extensions: 271308
Number of successful extensions: 801
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 800
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1911862400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)