Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_O22
         (907 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4A574 Cluster: Putative uncharacterized protein; n=3; ...    34   5.7  
UniRef50_A5DZE2 Cluster: Putative uncharacterized protein; n=1; ...    33   7.6  

>UniRef50_Q4A574 Cluster: Putative uncharacterized protein; n=3;
           Caenorhabditis elegans|Rep: Putative uncharacterized
           protein - Caenorhabditis elegans
          Length = 955

 Score = 33.9 bits (74), Expect = 5.7
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = -1

Query: 208 GWPKNESGSLITTESAFSTTLTGFLSVGHSQQSEDENHEEFHFYMITSYH 59
           GW    S S++TT  AFS      ++ G  Q   D +H   HF   +S H
Sbjct: 297 GWRTRTSRSIMTTPEAFSRVRHISITFGEQQHDIDTDHSNQHFGSPSSLH 346


>UniRef50_A5DZE2 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 1170

 Score = 33.5 bits (73), Expect = 7.6
 Identities = 19/50 (38%), Positives = 23/50 (46%)
 Frame = +3

Query: 204 QPTVGNGLRNLFDNRPVHR*SSPRIQTPNGNGLPNLSNTVHITWNPPPRP 353
           QP  G  + NL D     R S P + TPNG    +L N+ H    PP  P
Sbjct: 174 QPGNGMQISNLIDTAE-RRVSYPNVHTPNGRERHSLLNSSHSNHFPPTHP 222


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 728,780,609
Number of Sequences: 1657284
Number of extensions: 14001450
Number of successful extensions: 27631
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 26033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27512
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 82391630811
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)