Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_O22
         (907 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g61320.1 68418.m07695 cytochrome P450, putative Similar to  C...    31   1.4  
At1g22870.1 68414.m02855 protein kinase family protein contains ...    29   5.6  
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex...    28   9.8  

>At5g61320.1 68418.m07695 cytochrome P450, putative Similar to
           Cytochrome P450 89A2 (SP:Q42602)[Arabidopsis thaliana];
           contains Pfam profile: PF00067 cytochrome P450
          Length = 497

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +3

Query: 342 PPRPNFISSPNPFSWVLAG 398
           PP PNF   P PF W+  G
Sbjct: 32  PPNPNFFPMPGPFQWLRQG 50


>At1g22870.1 68414.m02855 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 913

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 3/84 (3%)
 Frame = +3

Query: 135 KNPVKVVENADSVVINEP--DSFFGQPTVGNGLRNLFD-NRPVHR*SSPRIQTPNGNGLP 305
           + P K  E   S   N P  D  +  PT  +  R+    N P    S+ + Q+ N   +P
Sbjct: 643 QTPTKKTEKVASAAKNSPAWDEDWALPTKISAPRDPGPANSPQFNNSTVQSQSSNRTSVP 702

Query: 306 NLSNTVHITWNPPPRPNFISSPNP 377
                V + W  PPR +F ++  P
Sbjct: 703 TTCPAVDLEW--PPRQSFNATAQP 724


>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
           extensin family protein similar to extensin-like protein
           [Lycopersicon esculentum] gi|5917664|gb|AAD55979;
           contains leucine-rich repeats, Pfam:PF00560; contains
           proline rich extensin domains, INTERPRO:IPR002965
          Length = 839

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 17/40 (42%), Positives = 20/40 (50%)
 Frame = +3

Query: 264 SSPRIQTPNGNGLPNLSNTVHITWNPPPRPNFISSPNPFS 383
           SSP+   P    LP  + T H   +PPP P  I SP P S
Sbjct: 711 SSPQPPPPPHYSLPPPTPTYHYI-SPPPPPTPIHSPPPQS 749


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,741,651
Number of Sequences: 28952
Number of extensions: 318659
Number of successful extensions: 923
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2139598560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)