Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_O21
(926 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47949| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.046
SB_30749| Best HMM Match : FARP (HMM E-Value=0.032) 33 0.25
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 33 0.33
SB_52189| Best HMM Match : DUF454 (HMM E-Value=5.7) 33 0.43
SB_318| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.43
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 32 0.57
SB_13183| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.76
SB_8802| Best HMM Match : WW (HMM E-Value=3.2e-31) 32 0.76
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 31 1.7
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 29 4.0
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 29 4.0
SB_49185| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_16955| Best HMM Match : SLAP (HMM E-Value=0.048) 29 4.0
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 29 5.3
SB_26688| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.1
SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.1
SB_56471| Best HMM Match : RVT_1 (HMM E-Value=0.00041) 29 7.1
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
>SB_47949| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 280
Score = 35.9 bits (79), Expect = 0.046
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 625 PTGTIKIPXRFPPGKLPRAALPVPDPARLPGIPG 726
P G + P PPG++P LP P P +P PG
Sbjct: 218 PPGMLPPPGGMPPGRMPPQGLPFPPPGPIPPPPG 251
>SB_30749| Best HMM Match : FARP (HMM E-Value=0.032)
Length = 2565
Score = 33.5 bits (73), Expect = 0.25
Identities = 25/75 (33%), Positives = 36/75 (48%)
Frame = +2
Query: 311 RGGEAGCVFGRLFRFPRSLTRCARVVPAAGERVSAHSKGRVIRXSTEIQGDNARKXTCEA 490
R G G GR R+ R L R R G RVS S+ +V+R +G R+ A
Sbjct: 1880 RHGRLGRRTGRRGRYLRLLVRRGRRYGRRGRRVSRRSRRKVVRRK---RGRERRRRRRMA 1936
Query: 491 KRASQKARKP*KRPR 535
+R ++AR+ +R R
Sbjct: 1937 RRRRRRARRRRRRLR 1951
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 33.1 bits (72), Expect = 0.33
Identities = 31/119 (26%), Positives = 41/119 (34%)
Frame = +1
Query: 568 PPXQAXTKNRRSSXKVAXTPTGTIKIPXRFPPGKLPRAALPVPDPARLPGIPGPPFSPLR 747
PP A VA + T T + PP + VP PA P P +P
Sbjct: 309 PPMGAQLPETEQPQMVAPSSTVTPPVTEPAPPSSVVAPPPAVPTPAT---APPPVVAPPP 365
Query: 748 EXVXAFSPXLTLLGISVXGVKVRSAPKPGACVAPNPPXQPRTXXRPYPGXYSXLXXPPP 924
+ S T + V S+ P AP PP P + P G + + PPP
Sbjct: 366 SVFASSSGVPTPVKAPPPSVFASSSGVPTPVAAP-PPAPPPSVFAPSSGVPTPVAAPPP 423
>SB_52189| Best HMM Match : DUF454 (HMM E-Value=5.7)
Length = 203
Score = 32.7 bits (71), Expect = 0.43
Identities = 19/30 (63%), Positives = 19/30 (63%)
Frame = +2
Query: 317 GEAGCVFGRLFRFPRSLTRCARVVPAAGER 406
GEA CV G L PRSLTRCAR GER
Sbjct: 109 GEAVCVLGAL-PLPRSLTRCARSF-GCGER 136
>SB_318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1081
Score = 32.7 bits (71), Expect = 0.43
Identities = 19/30 (63%), Positives = 19/30 (63%)
Frame = +2
Query: 317 GEAGCVFGRLFRFPRSLTRCARVVPAAGER 406
GEA CV G L PRSLTRCAR GER
Sbjct: 473 GEAVCVLGAL-PLPRSLTRCARSF-GCGER 500
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 32.3 bits (70), Expect = 0.57
Identities = 27/104 (25%), Positives = 32/104 (30%), Gaps = 4/104 (3%)
Frame = +1
Query: 625 PTGTIKIPXRFPPGKLPRAALPVPDPARLPGI----PGPPFSPLREXVXAFSPXLTLLGI 792
P + P PP P P P P P P PP +P P +
Sbjct: 117 PETPSQAPSPPPPPTSPATRAPPPPPPIAPATGGPPPPPPIAPATGGPPPPPPIAPAATV 176
Query: 793 SVXGVKVRSAPKPGACVAPNPPXQPRTXXRPYPGXYSXLXXPPP 924
V + +A P P PP P P P L PPP
Sbjct: 177 PAPAVPLAAASPPPPSGGPPPPPPP--PPPPPPPPILELAAPPP 218
>SB_13183| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 500
Score = 31.9 bits (69), Expect = 0.76
Identities = 12/37 (32%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = -3
Query: 564 GALWEKTPSQRGL-FYGFLAFWLALLASHVXFLALSP 457
G +W K PS+R L F+G + + +LA+ +++++P
Sbjct: 120 GIVWSKKPSERSLCFWGLILGFFLMLAARALYISVNP 156
>SB_8802| Best HMM Match : WW (HMM E-Value=3.2e-31)
Length = 662
Score = 31.9 bits (69), Expect = 0.76
Identities = 17/55 (30%), Positives = 21/55 (38%)
Frame = +1
Query: 568 PPXQAXTKNRRSSXKVAXTPTGTIKIPXRFPPGKLPRAALPVPDPARLPGIPGPP 732
PP N R P + +P PPG LP +P P G+PG P
Sbjct: 347 PPGNMSMPNHRPQGLPPGMPPMALSLPGMPPPGLLPPPGMPPRLPIPGLGLPGMP 401
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 30.7 bits (66), Expect = 1.7
Identities = 25/78 (32%), Positives = 28/78 (35%)
Frame = +1
Query: 658 PPGKLPRAALPVPDPARLPGIPGPPFSPLREXVXAFSPXLTLLGISVXGVKVRSAPKPGA 837
PP R + P P PAR+ P PP P R P G+ AP P
Sbjct: 305 PPPPPSRGSAPPPPPARMGTAPPPP-PPSRSSQRPPPPSRGAPPPPSMGM----APPPVG 359
Query: 838 CVAPNPPXQPRTXXRPYP 891
AP PP P P P
Sbjct: 360 GAAPPPPPPPPVGGPPPP 377
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 29.5 bits (63), Expect = 4.0
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +1
Query: 628 TGTIKIPXRFPPGKLPRAALPVPDPARLPGIPGPPFSP 741
+GT+ +P PP A LP P P+ PG G P P
Sbjct: 706 SGTLPMPPPPPPPPPGCAGLPPPPPSPQPGCAGLPPPP 743
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 29.5 bits (63), Expect = 4.0
Identities = 19/48 (39%), Positives = 21/48 (43%)
Frame = +1
Query: 598 RSSXKVAXTPTGTIKIPXRFPPGKLPRAALPVPDPARLPGIPGPPFSP 741
++S K A TP P PPG A P P P LPG PP P
Sbjct: 647 KASTKEAATPEAGPPPPPPPPPGGQAGGA-PPPPPPPLPGGAAPPPPP 693
>SB_49185| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 29.5 bits (63), Expect = 4.0
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = -3
Query: 459 PWISVDXRITRPLE*ADTRSPAAGTTRAQRVSERGXRKSRPNTQPASPPRV 307
P + V R L T SP G + R S +G R +RP++ ASP +
Sbjct: 158 PKVFVPTAHARGLTGPTTSSPIKGRPTSARQSPQGTRPTRPSSAHASPSSI 208
>SB_16955| Best HMM Match : SLAP (HMM E-Value=0.048)
Length = 1952
Score = 29.5 bits (63), Expect = 4.0
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = -3
Query: 459 PWISVDXRITRPLE*ADTRSPAAGTTRAQRVSERGXRKSRPNTQPASPPRV 307
P + V R L T SP G + R S +G R +RP++ ASP +
Sbjct: 1739 PKVFVPTAHARGLTGPTTSSPIKGRPTSARQSPQGTRPTRPSSAHASPSSI 1789
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 29.1 bits (62), Expect = 5.3
Identities = 33/127 (25%), Positives = 43/127 (33%), Gaps = 6/127 (4%)
Frame = +1
Query: 562 SAPPXQAXTKNRRSSXKVAXTPTGTIKIPXR--FPPGK-LPRA--ALPVPDPARLPGIPG 726
S PP T + + TI P PP +P A P+P+ PG P
Sbjct: 160 SKPPVTETTTTKPETKPPKPPAPSTIPTPPTPPAPPSPPIPTAPPTPPMPETPLPPGSPH 219
Query: 727 PPFSPLREXVXAFSPXLTLLGISVXGVKVRSAPKPGACVAP-NPPXQPRTXXRPYPGXYS 903
P +PL + +P I+ + P P A P PP P P P S
Sbjct: 220 IPPAPLHPHIPP-APPNPSKAIATPNPPMPETPLPPATPNPFIPPASPNPSIPPAPPNPS 278
Query: 904 XLXXPPP 924
P P
Sbjct: 279 IPAPPNP 285
>SB_26688| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1199
Score = 29.1 bits (62), Expect = 5.3
Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Frame = +1
Query: 658 PPGKLPRAALPVPDPARLPGIPGPPFSPLREXVXAFSPXLTLLGISVXGVKVRSAPKPGA 837
P GK R A+ D PP SP ++ +P L L + P+PG+
Sbjct: 496 PSGKFAREAIKESDSDSDTSDSSPPTSPTQQSPLETTPVLPL--------PEKVTPEPGS 547
Query: 838 CVAPN-PPXQPRTXXRP 885
P+ PP P++ P
Sbjct: 548 TTPPSPPPDSPKSVAPP 564
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 29.1 bits (62), Expect = 5.3
Identities = 25/90 (27%), Positives = 31/90 (34%)
Frame = +1
Query: 652 RFPPGKLPRAALPVPDPARLPGIPGPPFSPLREXVXAFSPXLTLLGISVXGVKVRSAPKP 831
R PP P +P P + P +P PP +P +P + G P P
Sbjct: 540 RVPPPGAPHPRVPPPGASH-PRVP-PPGAPHPRVPPPGAPHPR---VPPPGTPHPRVPPP 594
Query: 832 GACVAPNPPXQPRTXXRPYPGXYSXLXXPP 921
GA PP PY G Y PP
Sbjct: 595 GAPHPKVPPPGAPYQRLPYSGAYHPRLPPP 624
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 29.1 bits (62), Expect = 5.3
Identities = 27/97 (27%), Positives = 30/97 (30%), Gaps = 4/97 (4%)
Frame = +1
Query: 646 PXRFPPGKLPRAALPVPDPARLPGIPGPPFSPLREXVXAFSPXLTLLGISVXGVKVRSAP 825
P +PP P P P A P P PP+ P SP P
Sbjct: 105 PPPYPPP--PNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYP 162
Query: 826 KPGACVAPN----PPXQPRTXXRPYPGXYSXLXXPPP 924
P PN PP P PYP + PPP
Sbjct: 163 PPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPP 199
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Frame = +1
Query: 658 PPGKLPRAALPV--PDPARLPGIPGPPFSP 741
PP P AA P P PA P P PP +P
Sbjct: 52 PPPPSPPAAAPAAPPPPAAAPAAPPPPAAP 81
>SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1486
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = +1
Query: 646 PXRFPPGKLPR-AALPVPDPARLPGIPGPPFSP 741
P PP P+ LP P P P P PPF P
Sbjct: 1238 PPAMPPDGPPKFMGLPPPPPGMRPMPPQPPFMP 1270
>SB_56471| Best HMM Match : RVT_1 (HMM E-Value=0.00041)
Length = 1155
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +1
Query: 616 AXTPT-GTIKIPXRFPPGKLPRAALPVPDPARLPGIPGPP 732
A TP TI + P K P A P P L G+PG P
Sbjct: 1093 AYTPALPTIPMAPSGAPAKTPSVAPAAPSPRPLTGLPGRP 1132
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 28.3 bits (60), Expect = 9.3
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = +1
Query: 658 PPGKL--PRAALPVPDPARLPGIPGPPFSPLREXVXA 762
PPG P A +P P G PGPP P R+ V A
Sbjct: 3809 PPGPQGPPGQASQIPGPPGPQGPPGPPGPPGRDVVDA 3845
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,301,175
Number of Sequences: 59808
Number of extensions: 559029
Number of successful extensions: 1641
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1579
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2693287426
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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