Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_O20
         (850 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y14330-1|CAA74706.1| 1223|Homo sapiens jagged2 protein protein.        30   9.2  
AF111170-2|AAD15562.1| 1238|Homo sapiens Jagged2 protein.              30   9.2  
AF029779-1|AAB84216.1| 1200|Homo sapiens hJAG2.del-E6 protein.         30   9.2  
AF029778-1|AAB84215.1| 1238|Homo sapiens Jagged2 protein.              30   9.2  
AF020201-1|AAB71189.1| 1238|Homo sapiens Jagged 2 protein.             30   9.2  
AF003521-1|AAB61285.1| 1238|Homo sapiens Jagged 2 protein.             30   9.2  

>Y14330-1|CAA74706.1| 1223|Homo sapiens jagged2 protein protein.
          Length = 1223

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = +1

Query: 46  CVSNLSKSNKFPCYNDVEDCLD--NDFRCRCVG**L*SDYSGCDLAMHQEQC 195
           C  N +  N  PCYN    C+D  N FRC C        ++G D  ++ ++C
Sbjct: 771 CTHNTNDCNPLPCYNG-GICVDGVNWFRCECA-----PGFAGPDCRINIDEC 816


>AF111170-2|AAD15562.1| 1238|Homo sapiens Jagged2 protein.
          Length = 1238

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = +1

Query: 46  CVSNLSKSNKFPCYNDVEDCLD--NDFRCRCVG**L*SDYSGCDLAMHQEQC 195
           C  N +  N  PCYN    C+D  N FRC C        ++G D  ++ ++C
Sbjct: 786 CTHNTNDCNPLPCYNG-GICVDGVNWFRCECA-----PGFAGPDCRINIDEC 831


>AF029779-1|AAB84216.1| 1200|Homo sapiens hJAG2.del-E6 protein.
          Length = 1200

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = +1

Query: 46  CVSNLSKSNKFPCYNDVEDCLD--NDFRCRCVG**L*SDYSGCDLAMHQEQC 195
           C  N +  N  PCYN    C+D  N FRC C        ++G D  ++ ++C
Sbjct: 748 CTHNTNDCNPLPCYNG-GICVDGVNWFRCECA-----PGFAGPDCRINIDEC 793


>AF029778-1|AAB84215.1| 1238|Homo sapiens Jagged2 protein.
          Length = 1238

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = +1

Query: 46  CVSNLSKSNKFPCYNDVEDCLD--NDFRCRCVG**L*SDYSGCDLAMHQEQC 195
           C  N +  N  PCYN    C+D  N FRC C        ++G D  ++ ++C
Sbjct: 786 CTHNTNDCNPLPCYNG-GICVDGVNWFRCECA-----PGFAGPDCRINIDEC 831


>AF020201-1|AAB71189.1| 1238|Homo sapiens Jagged 2 protein.
          Length = 1238

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = +1

Query: 46  CVSNLSKSNKFPCYNDVEDCLD--NDFRCRCVG**L*SDYSGCDLAMHQEQC 195
           C  N +  N  PCYN    C+D  N FRC C        ++G D  ++ ++C
Sbjct: 786 CTHNTNDCNPLPCYNG-GICVDGVNWFRCECA-----PGFAGPDCRINIDEC 831


>AF003521-1|AAB61285.1| 1238|Homo sapiens Jagged 2 protein.
          Length = 1238

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = +1

Query: 46  CVSNLSKSNKFPCYNDVEDCLD--NDFRCRCVG**L*SDYSGCDLAMHQEQC 195
           C  N +  N  PCYN    C+D  N FRC C        ++G D  ++ ++C
Sbjct: 786 CTHNTNDCNPLPCYNG-GICVDGVNWFRCECA-----PGFAGPDCRINIDEC 831


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,464,027
Number of Sequences: 237096
Number of extensions: 2437097
Number of successful extensions: 4816
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4816
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10761200974
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)