Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_O19
(753 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.13
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.57
SB_11420| Best HMM Match : MBOAT (HMM E-Value=6.9e-06) 25 0.76
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 31 0.76
SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 25 1.2
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 1.2
SB_42356| Best HMM Match : PDZ (HMM E-Value=5.7e-19) 30 1.8
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 30 2.3
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 30 2.3
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 30 2.3
SB_43066| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 2.9
SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08) 29 3.1
SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05) 24 4.3
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 29 5.4
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 24 7.8
SB_812| Best HMM Match : FH2 (HMM E-Value=0) 28 9.4
SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 28.7 bits (61), Expect(2) = 0.13
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +1
Query: 538 PPXPPXLXXGXXXPHPXXFFXFXXHXXKKPXPPXPPPP 651
PP PP L P P P PP PPPP
Sbjct: 154 PPYPPPLYPPPPNPPPPNAPYPPPPYPPPPNPPYPPPP 191
Score = 27.5 bits (58), Expect(2) = 0.48
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +1
Query: 541 PXPPXLXXGXXXPHPXXFFXFXXHXXKKPXPPXPPPP 651
P P L HP F P PP PPPP
Sbjct: 70 PDAPCLVSAKCGGHPPTNFSPNPPYPPPPYPPYPPPP 106
Score = 24.2 bits (50), Expect(2) = 0.13
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = +1
Query: 625 PXPPXPPPPXTXTKKXXXPXLXXP 696
P PP PPPP P P
Sbjct: 191 PNPPYPPPPNAPNPPPPNPPYPPP 214
Score = 23.4 bits (48), Expect(2) = 0.48
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = +1
Query: 625 PXPPXPPPPXTXTKKXXXPXLXXP 696
P PP PPPP P P
Sbjct: 112 PNPPYPPPPNAPYPPPPNPPYPPP 135
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 31.9 bits (69), Expect = 0.57
Identities = 20/66 (30%), Positives = 21/66 (31%)
Frame = +2
Query: 356 GGXXXXLXKXXGGGXXXPPPPXGGGXKXXXGXFFFXXXXXXPPXXXGGGXQXKXXXXXGG 535
GG GG PPPP GG PP GG + G
Sbjct: 905 GGSESPSASPPGGSVPPPPPPPGGNAPL-------------PPPPPGGSAPSQPPPPGGN 951
Query: 536 XPPPPP 553
PPPPP
Sbjct: 952 APPPPP 957
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = -1
Query: 549 GGGGXPPXXXXXFXCXPPPXXXGGXXXXXXKKXXPXXXFXPPPXGGGGXXXPPP 388
GG P PPP GG PPP GG PPP
Sbjct: 905 GGSESPSASPPGGSVPPPPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPP 958
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +3
Query: 390 GGXXXPPPPPXGGGXNXXXXXFFSXXXXXPXPXXXGGXNXKNXXXXPGGXPXPP 551
GG PPPPP GG P P G N PGG PP
Sbjct: 916 GGSVPPPPPPPGGNAPLPPPPPGGSAPSQPPPP---GGNAPPPPPPPGGSAPPP 966
>SB_11420| Best HMM Match : MBOAT (HMM E-Value=6.9e-06)
Length = 628
Score = 25.0 bits (52), Expect(2) = 0.76
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 622 KPXPPXPPPP 651
KP PP PPPP
Sbjct: 210 KPPPPPPPPP 219
Score = 25.0 bits (52), Expect(2) = 0.76
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +1
Query: 625 PXPPXPPPPXTXTKKXXXP 681
P PP PPPP ++ P
Sbjct: 215 PPPPPPPPPPMLARRWYYP 233
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 31.5 bits (68), Expect = 0.76
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = +2
Query: 395 GXXXPPPPXGGGXKXXXGXFFFXXXXXXPPXXXGGGXQXKXXXXXGGXPPPPP 553
G PPPP GG PP GG GG PPPPP
Sbjct: 659 GPPPPPPPPPGGQAGGA-------PPPPPPPLPGGAAPPPPPPIGGGAPPPPP 704
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 390 GGXXXPPPPPXGGG 431
GG PPPPP GGG
Sbjct: 685 GGAAPPPPPPIGGG 698
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -1
Query: 501 PPPXXXGGXXXXXXKKXXPXXXFXPPPXGGGGXXXPPP 388
PPP G P PPP GG PPP
Sbjct: 666 PPPGGQAGGAPPPPPPPLPGGAAPPPPPPIGGGAPPPP 703
>SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 31.5 bits (68), Expect = 0.76
Identities = 20/66 (30%), Positives = 21/66 (31%)
Frame = -1
Query: 552 GGGGGXPPXXXXXFXCXPPPXXXGGXXXXXXKKXXPXXXFXPPPXGGGGXXXPPPXXXXX 373
G GGG PP PPP G PPP G G PPP
Sbjct: 498 GQGGGPPPPGAGQGGGPPPP---GAGQGWGQPPPGAGQGGGPPPPGAGQGGGPPPPGAGQ 554
Query: 372 LFXXPP 355
+ PP
Sbjct: 555 GWGQPP 560
Score = 30.3 bits (65), Expect = 1.8
Identities = 22/72 (30%), Positives = 24/72 (33%), Gaps = 6/72 (8%)
Frame = -1
Query: 552 GGGGGXPPXXXXXFXCXPPPXXX--GGXXXXXXKKXXPXXXFX----PPPXGGGGXXXPP 391
G GGG PP PPP GG + P PPP G G PP
Sbjct: 542 GQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGPPPPGAGQEGPPPPGAGQGGGPP 601
Query: 390 PXXXXXLFXXPP 355
P + PP
Sbjct: 602 PPGAGQGWGLPP 613
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/69 (27%), Positives = 19/69 (27%)
Frame = +2
Query: 344 KXXXGGXXXXLXKXXGGGXXXPPPPXGGGXKXXXGXFFFXXXXXXPPXXXGGGXQXKXXX 523
K GG G PPPP G PP GG
Sbjct: 482 KVPGGGQGWGQPPPGAGQGGGPPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGA 541
Query: 524 XXGGXPPPP 550
GG PPPP
Sbjct: 542 GQGGGPPPP 550
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/60 (31%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
Frame = +2
Query: 374 LXKXXGGGXXXPPPPXGGGXKXXXGXFFFXXXXXXPPXXXG-GGXQXKXXXXXGGXPPPP 550
+ K GGG PP G G PP G G Q GG PPPP
Sbjct: 480 MGKVPGGGQGWGQPPPGAGQGGGPPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPP 539
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/67 (31%), Positives = 22/67 (32%), Gaps = 1/67 (1%)
Frame = -1
Query: 552 GGGGGXPPXXXXXFXCXPPPXXX-GGXXXXXXKKXXPXXXFXPPPXGGGGXXXPPPXXXX 376
G G G PP PPP GG + P PPP G G PPP
Sbjct: 553 GQGWGQPPPGAGQGGGPPPPGAGQGGPPPPGAGQEGP-----PPPGAGQGGGPPPPGAGQ 607
Query: 375 XLFXXPP 355
PP
Sbjct: 608 GWGLPPP 614
Score = 28.3 bits (60), Expect = 7.1
Identities = 24/85 (28%), Positives = 25/85 (29%)
Frame = -2
Query: 584 GCGXXXPXXXXGGXGGXPRXXXXVFXVXPPPRXXXGXXXXXRKKXXXXXVXPPPXXGGGG 405
G G P G GG P PPP G PPP G GG
Sbjct: 487 GQGWGQPPPGAGQGGGPPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGG-PPPPGAGQGG 545
Query: 404 XXXPPPPXXXXXFXXPXXXFFXPGG 330
PPPP + P GG
Sbjct: 546 --GPPPPGAGQGWGQPPPGAGQGGG 568
Score = 27.9 bits (59), Expect = 9.4
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Frame = +2
Query: 389 GGGXXXPPPPXG-GGXKXXXGXFFFXXXXXXPPXXXGGGXQXKXXXXXGGXPPPP 550
G G PPP G GG G PP G Q GG PPPP
Sbjct: 520 GQGWGQPPPGAGQGGGPPPPGAG--QGGGPPPPGAGQGWGQPPPGAGQGGGPPPP 572
Score = 27.9 bits (59), Expect = 9.4
Identities = 18/61 (29%), Positives = 19/61 (31%)
Frame = -1
Query: 549 GGGGXPPXXXXXFXCXPPPXXXGGXXXXXXKKXXPXXXFXPPPXGGGGXXXPPPXXXXXL 370
G GG PP PPP G PPP G G PPP L
Sbjct: 564 GQGGGPPPPGAGQGGPPPP---GAGQEGPPPPGAGQGGGPPPPGAGQGWGLPPPGSGLHL 620
Query: 369 F 367
+
Sbjct: 621 Y 621
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 25.0 bits (52), Expect(2) = 1.2
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 610 HXXKKPXPPXPPPP 651
H P PP PPPP
Sbjct: 814 HEDSPPPPPPPPPP 827
Score = 24.2 bits (50), Expect(2) = 1.2
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +1
Query: 625 PXPPXPPPPXTXTKK 669
P PP PPPP + K
Sbjct: 820 PPPPPPPPPEEPSNK 834
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 24.6 bits (51), Expect(2) = 1.2
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +1
Query: 619 KKPXPPXPPPP 651
++P PP PPPP
Sbjct: 865 RRPPPPPPPPP 875
Score = 24.6 bits (51), Expect(2) = 1.2
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 625 PXPPXPPPPXTXT 663
P PP PPPP + T
Sbjct: 877 PPPPPPPPPASST 889
Score = 23.4 bits (48), Expect(2) = 5.8
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +1
Query: 619 KKPXPPXPPPP 651
+ P PP PPPP
Sbjct: 866 RPPPPPPPPPP 876
Score = 23.4 bits (48), Expect(2) = 5.8
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +1
Query: 625 PXPPXPPPPXTXTKKXXXP 681
P PP PPPP + P
Sbjct: 875 PPPPPPPPPPPASSTGSTP 893
>SB_42356| Best HMM Match : PDZ (HMM E-Value=5.7e-19)
Length = 619
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +1
Query: 538 PPXPPXLXXGXXXPHPXXFFXFXXHXXKKPXPPXPPPP 651
PP PP PHP H + P PPPP
Sbjct: 50 PPPPPTRPSHSCGPHPVPPTPLVQHPEPEAPPQLPPPP 87
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/65 (30%), Positives = 20/65 (30%), Gaps = 5/65 (7%)
Frame = +2
Query: 374 LXKXXGGGXXXPPPPXG-----GGXKXXXGXFFFXXXXXXPPXXXGGGXQXKXXXXXGGX 538
L K G PPPP G G K G PP G G
Sbjct: 156 LAKKPSQGSFPPPPPMGKPPPPSGNKPTFGNSRTSTNGPPPPPHSRHGSAPPPPERSSGP 215
Query: 539 PPPPP 553
PPPPP
Sbjct: 216 PPPPP 220
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/65 (30%), Positives = 20/65 (30%), Gaps = 5/65 (7%)
Frame = +2
Query: 374 LXKXXGGGXXXPPPPXG-----GGXKXXXGXFFFXXXXXXPPXXXGGGXQXKXXXXXGGX 538
L K G PPPP G G K G PP G G
Sbjct: 68 LAKKPSQGSFPPPPPMGKPPPPSGNKPTFGNSRTSTNGPPPPPHSRHGSAPPPPERSSGP 127
Query: 539 PPPPP 553
PPPPP
Sbjct: 128 PPPPP 132
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = -1
Query: 546 GGGXPPXXXXXFXCXPPPXXXGGXXXXXXKKXXPXXXFXPPPXGGGGXXXPPP 388
GG PP PPP P PPP GG PPP
Sbjct: 149 GGPPPPPPIAPATGGPPPPPPIAPAATVPAPAVPLAAASPPPPSGGPPPPPPP 201
>SB_43066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 24.6 bits (51), Expect(2) = 2.9
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 610 HXXKKPXPPXPPPP 651
H P PP PPPP
Sbjct: 52 HDPPPPPPPPPPPP 65
Score = 23.8 bits (49), Expect(2) = 2.9
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +1
Query: 625 PXPPXPPPPXTXTKKXXXP 681
P PP PPPP + P
Sbjct: 60 PPPPPPPPPPPPSSSPSRP 78
>SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08)
Length = 1052
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 437 VXPPPXXGGGGXXXPPPP 384
V PPP G GG PPPP
Sbjct: 194 VPPPPPPGPGGIPPPPPP 211
>SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05)
Length = 1878
Score = 23.8 bits (49), Expect(2) = 4.3
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 625 PXPPXPPPPXTXT 663
P PP PPPP T
Sbjct: 1317 PPPPPPPPPLPPT 1329
Score = 23.4 bits (48), Expect(2) = 4.3
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +1
Query: 619 KKPXPPXPPPP 651
+ P PP PPPP
Sbjct: 1309 ESPPPPPPPPP 1319
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 28.7 bits (61), Expect = 5.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 431 PPPXXGGGGXXXPPPP 384
PPP G GG PPPP
Sbjct: 321 PPPPPGDGGAPPPPPP 336
Score = 23.8 bits (49), Expect(2) = 6.4
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +1
Query: 538 PPXPPXLXXGXXXPHPXXFFXFXXHXXKKPXPPXPPPP 651
PP PP P P P PP PPPP
Sbjct: 292 PPPPPADGSAPAPPPPPP----PGGAPPPPPPPPPPPP 325
Score = 23.0 bits (47), Expect(2) = 6.4
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 385 GGGGXXXPPPPXXG 426
GGG PPPP G
Sbjct: 286 GGGAPVPPPPPADG 299
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 23.8 bits (49), Expect(2) = 7.8
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 385 GGGGXXXPPPP 417
GGGG PPPP
Sbjct: 340 GGGGVNPPPPP 350
Score = 22.6 bits (46), Expect(2) = 7.8
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +1
Query: 538 PPXPPXLXXGXXXPHPXXFFXFXXHXXKKPXPPXPPPP 651
PP PP G P P PP PPPP
Sbjct: 374 PPPPPPPTNGPPPPPPPTNGP-PPPPPPTNGPPPPPPP 410
>SB_812| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1430
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 431 PPPXXGGGGXXXPPPP 384
PPP GGG PPPP
Sbjct: 653 PPPPPGGGMFPPPPPP 668
>SB_56047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 440
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 4/42 (9%)
Frame = +1
Query: 538 PPXPPXLXXGXXXP----HPXXFFXFXXHXXKKPXPPXPPPP 651
PP PP L G P HP P PP PPPP
Sbjct: 280 PPPPPPLTGGMLPPPFGGHPAAAPPPPPLPAGVPAPPPPPPP 321
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,330,585
Number of Sequences: 59808
Number of extensions: 342745
Number of successful extensions: 1369
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 908
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2046258890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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