Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_O19
(753 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g07770.1 68418.m00889 formin homology 2 domain-containing pro... 35 0.067
At4g16140.1 68417.m02445 proline-rich family protein contains pr... 33 0.15
At3g51290.1 68416.m05614 proline-rich family protein 27 0.17
At1g61080.1 68414.m06877 proline-rich family protein 25 0.78
At1g70620.2 68414.m08137 cyclin-related contains weak similarity... 31 1.1
At1g70620.1 68414.m08138 cyclin-related contains weak similarity... 31 1.1
At5g58160.1 68418.m07280 formin homology 2 domain-containing pro... 25 1.3
At1g62500.1 68414.m07052 protease inhibitor/seed storage/lipid t... 30 1.4
At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family... 30 1.9
At1g24150.1 68414.m03047 formin homology 2 domain-containing pro... 26 2.3
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 24 3.0
At3g26120.1 68416.m03257 RNA-binding protein, putative similar t... 29 3.3
At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family... 29 4.4
At2g25050.1 68415.m02996 formin homology 2 domain-containing pro... 25 4.7
At1g02405.1 68414.m00187 proline-rich family protein contains pr... 26 5.8
At5g41440.1 68418.m05033 zinc finger (C3HC4-type RING finger) fa... 23 5.9
At5g39760.1 68418.m04816 zinc finger homeobox protein-related / ... 28 7.7
At3g19320.1 68416.m02450 leucine-rich repeat family protein cont... 28 7.7
At1g59910.1 68414.m06749 formin homology 2 domain-containing pro... 28 7.7
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 28 7.7
At3g50140.1 68416.m05481 expressed protein contains Pfam profile... 25 8.5
At4g16790.1 68417.m02536 hydroxyproline-rich glycoprotein family... 23 8.5
>At5g07770.1 68418.m00889 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 722
Score = 34.7 bits (76), Expect = 0.067
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -2
Query: 506 VXPPPRXXXGXXXXXRKKXXXXXVXPPPXXGGGGXXXPPPP 384
V PPPR G R PPP GG PPPP
Sbjct: 616 VNPPPRLVCGPYPLPRLVRVGSPSPPPPSMSGGAPPPPPPP 656
>At4g16140.1 68417.m02445 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 164
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/61 (29%), Positives = 19/61 (31%), Gaps = 1/61 (1%)
Frame = -1
Query: 534 PPXXXXXFXCXPPPXXXGGXXXXXXKKXXPXXXFXPPP-XGGGGXXXPPPXXXXXLFXXP 358
PP C PPP GG + PPP GG PPP P
Sbjct: 57 PPPSPTTTACPPPPSSSGGGPYYYYPPASQSGSYRPPPSSSSGGYYYPPPKSGGNYPYTP 116
Query: 357 P 355
P
Sbjct: 117 P 117
>At3g51290.1 68416.m05614 proline-rich family protein
Length = 602
Score = 27.1 bits (57), Expect(2) = 0.17
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 625 PXPPXPPPPXTXTKKXXXPXLXXP 696
P PP PPPP + T P + P
Sbjct: 108 PPPPPPPPPPSSTWDFWDPFIPPP 131
Score = 25.0 bits (52), Expect(2) = 0.17
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 610 HXXKKPXPPXPPPP 651
H P PP PPPP
Sbjct: 66 HNPPSPSPPPPPPP 79
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 25.0 bits (52), Expect(2) = 0.78
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +1
Query: 625 PXPPXPPPPXTXTKKXXXPXLXXP 696
P PP PPPP K P P
Sbjct: 456 PPPPPPPPPAVMPLKHFAPPPPPP 479
Score = 24.6 bits (51), Expect(2) = 0.78
Identities = 14/42 (33%), Positives = 14/42 (33%), Gaps = 4/42 (9%)
Frame = +1
Query: 538 PPXPPXLXX----GXXXPHPXXFFXFXXHXXKKPXPPXPPPP 651
PP PP L P P P PP PPPP
Sbjct: 421 PPPPPPLSFIKTASLPLPSPPPTPPIADIAISMPPPPPPPPP 462
>At1g70620.2 68414.m08137 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide
I) [Bos taurus]
Length = 884
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 538 PPXPPXLXXGXXXPHPXXFFXFXXHXXKKPXPPXPPPP 651
PP PP G P ++ H P PP PPPP
Sbjct: 34 PPVPPPTQPGG----PPAWYSNQFHHPHSPSPPPPPPP 67
>At1g70620.1 68414.m08138 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide
I) [Bos taurus]
Length = 897
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +1
Query: 538 PPXPPXLXXGXXXPHPXXFFXFXXHXXKKPXPPXPPPP 651
PP PP G P ++ H P PP PPPP
Sbjct: 34 PPVPPPTQPGG----PPAWYSNQFHHPHSPSPPPPPPP 67
>At5g58160.1 68418.m07280 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|Q05858 Formin (Limb deformity protein) {Gallus
gallus}; contains Pfam profile PF02181: Formin Homology
2(FH2) Domain
Length = 1307
Score = 25.0 bits (52), Expect(2) = 1.3
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 610 HXXKKPXPPXPPPP 651
H P PP PPPP
Sbjct: 723 HTSSPPPPPPPPPP 736
Score = 23.8 bits (49), Expect(2) = 1.3
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 625 PXPPXPPPPXTXT 663
P PP PPPP T
Sbjct: 729 PPPPPPPPPAPPT 741
Score = 23.0 bits (47), Expect(2) = 7.8
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 619 KKPXPPXPPPP 651
KKP P PPPP
Sbjct: 682 KKPALPRPPPP 692
Score = 23.0 bits (47), Expect(2) = 7.8
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = +1
Query: 625 PXPPXPPPPXTXTKKXXXPXLXXP 696
P PP PP P T P P
Sbjct: 712 PAPPAPPTPIVHTSSPPPPPPPPP 735
>At1g62500.1 68414.m07052 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to auxin
down regulated GB:X69640 GI:296442 from [Glycine max];
contains Pfam profile PF00234: Protease inhibitor/seed
storage/LTP family
Length = 297
Score = 30.3 bits (65), Expect = 1.4
Identities = 29/108 (26%), Positives = 34/108 (31%), Gaps = 4/108 (3%)
Frame = +1
Query: 385 GGGGXXXPPPPXXGGGKTXXXXXFFLXXXXXPXXXRGGGXTXKTXXXXRGXP--PXPPXL 558
GGGG PPP GG P GGG K+ R P PP +
Sbjct: 45 GGGGGGSKPPPHHGGKGGGKPPPHGGKGGGPPHHGGGGGGGGKSPPVVRPPPVVVRPPPI 104
Query: 559 XXGXXXPHPXXFFXFXXHXXKKP--XPPXPPPPXTXTKKXXXPXLXXP 696
+P + P PP PPP T T P + P
Sbjct: 105 IRPPPVVYPPPIVR-PPPITRPPIIIPPIQPPPVT-TPPGLLPPITTP 150
>At4g11430.1 68417.m01841 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; related to hydroxyproline-rich
glycoprotein [Phaseolus vulgaris] gi|169349|gb|AAA33765
Length = 219
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +1
Query: 538 PPXPPXLXXGXXXPHPXXFFXFXXHXXKKPXPPXPPPPXTXT 663
PP PP P H + P PP PPPP T
Sbjct: 122 PPPPPPPPPPTITPPVTTTTAGHHHHRRSPPPPPPPPPPPPT 163
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Frame = +1
Query: 529 RGXPPXPPXLXXGXXXPHPXXFFXFXXHXXKK---PXPPXPPPPXTXT 663
R PP PP P H ++ P PP PPPP T T
Sbjct: 118 RSPPPPPPPPPPPPTITPPVTTTTAGHHHHRRSPPPPPPPPPPPPTIT 165
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +1
Query: 529 RGXPPXPPXLXXGXXXPHPXXFFXFXXHXXKKPXPPXPPPPXTXT 663
R PP PP L H H + P PP PPPP T
Sbjct: 96 RPPPPPPPPLSAITTTGH--------HHHRRSPPPPPPPPPPPPT 132
>At1g24150.1 68414.m03047 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 725
Score = 26.2 bits (55), Expect(2) = 2.3
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +1
Query: 625 PXPPXPPPPXTXTKKXXXPXLXXP 696
P PP PPPP K+ P P
Sbjct: 241 PTPPPPPPPPIPVKQSATPPPPPP 264
Score = 21.8 bits (44), Expect(2) = 2.3
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 622 KPXPPXPPPP 651
KP P PPPP
Sbjct: 238 KPDPTPPPPP 247
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 23.8 bits (49), Expect(2) = 3.0
Identities = 9/24 (37%), Positives = 10/24 (41%)
Frame = +1
Query: 580 HPXXFFXFXXHXXKKPXPPXPPPP 651
+P F P PP PPPP
Sbjct: 365 YPIDCASFGCSPPSPPPPPPPPPP 388
Score = 23.8 bits (49), Expect(2) = 3.0
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = +1
Query: 625 PXPPXPPPPXTXTKKXXXPXLXXP 696
P PP PPPP P P
Sbjct: 399 PPPPPPPPPYVYPSPPPPPPSPPP 422
>At3g26120.1 68416.m03257 RNA-binding protein, putative similar to
GB:AAC39463 from [Zea mays], PF00076 RNA recognition
motif (2 copies)
Length = 615
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Frame = +1
Query: 538 PPXPPX-LXXGXXXPHPXXFFXFXXHXXK-KPXPPXPPPP 651
PP PP P FF H P PP PPPP
Sbjct: 43 PPLPPSSYGLSPTEPRVFTFFNIPPHPMMFSPPPPQPPPP 82
>At3g25690.1 68416.m03197 hydroxyproline-rich glycoprotein family
protein Common family members: At4g18570, At4g04980,
At5g61090 [Arabidopsis thaliana]; identical to cDNA
CHUP1 for actin binding protein GI:28071264
Length = 1004
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 389 GGGXXXPPPPXGGGXKXXXG 448
GGG PPPP GGG G
Sbjct: 676 GGGPPPPPPPPGGGPPPPPG 695
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 431 PPPXXGGGGXXXPPPP 384
PPP GGG PPPP
Sbjct: 690 PPPPPGGGPPPPPPPP 705
>At2g25050.1 68415.m02996 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 1111
Score = 25.4 bits (53), Expect(2) = 4.7
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +1
Query: 538 PPXPPXLXXGXXXPHPXXFFXFXXHXXKKPXPPXPPPP 651
PP PP + P P + P PP PPPP
Sbjct: 574 PPPPPPISSLRSTPSPSSTSNSIA--TQGPPPPPPPPP 609
Score = 21.4 bits (43), Expect(2) = 4.7
Identities = 7/17 (41%), Positives = 8/17 (47%)
Frame = +1
Query: 631 PPXPPPPXTXTKKXXXP 681
PP PPPP + P
Sbjct: 638 PPPPPPPLHSNSRMGAP 654
>At1g02405.1 68414.m00187 proline-rich family protein contains
proline-rich region, INTERPRO:IPR000694
Length = 134
Score = 26.2 bits (55), Expect(2) = 5.8
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +1
Query: 538 PPXPPXLXXGXXXPHPXXFFXFXXHXXKKPXPPXPPPP 651
PP PP P P P PP PPPP
Sbjct: 52 PPSPPPPSCTPSPPPPSPPPPKKSSCPPSPLPPPPPPP 89
Score = 20.6 bits (41), Expect(2) = 5.8
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +1
Query: 625 PXPPXPPPPXTXT 663
P PP PPP T
Sbjct: 84 PPPPPPPPNYVFT 96
>At5g41440.1 68418.m05033 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 124
Score = 23.4 bits (48), Expect(2) = 5.9
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +1
Query: 619 KKPXPPXPPPP 651
+ P PP PPPP
Sbjct: 33 RTPPPPPPPPP 43
Score = 23.4 bits (48), Expect(2) = 5.9
Identities = 8/21 (38%), Positives = 10/21 (47%)
Frame = +1
Query: 625 PXPPXPPPPXTXTKKXXXPXL 687
P PP PPPP + P +
Sbjct: 36 PPPPPPPPPQQDIETGHIPAI 56
>At5g39760.1 68418.m04816 zinc finger homeobox protein-related /
ZF-HD homeobox protein-related predicted proteins,
Arabidopsis thaliana
Length = 334
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/37 (29%), Positives = 13/37 (35%)
Frame = +1
Query: 577 PHPXXFFXFXXHXXKKPXPPXPPPPXTXTKKXXXPXL 687
P P + H P PP PPPP P +
Sbjct: 119 PPPSTAVEYQPHHRHHPPPPPPPPPPRSPNSASPPPI 155
>At3g19320.1 68416.m02450 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560;
Length = 493
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/38 (31%), Positives = 14/38 (36%)
Frame = +1
Query: 538 PPXPPXLXXGXXXPHPXXFFXFXXHXXKKPXPPXPPPP 651
PP P P P + +P PP PPPP
Sbjct: 79 PPPSPSPEPEHYPPPPYHHYITPSPPPPRPLPPPPPPP 116
>At1g59910.1 68414.m06749 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 929
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -1
Query: 501 PPPXXXGGXXXXXXKKXXPXXXFXPPPXGGGGXXXPPP 388
PPP K P PPP G G PPP
Sbjct: 387 PPPPSAAAPPPPPPPKKGPAAPPPPPPPGKKGAGPPPP 424
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = +1
Query: 538 PPXPPXLXXGXXXPHPXXFFXFXXHXXKKPXPPXPPPPXTXTKKXXXPXLXXP 696
PP PP P P F +P PP PPPP + P P
Sbjct: 504 PPPPP--------PPPPLFMSTTSFSPSQPPPPPPPPPLFTSTTSFSPSQPPP 548
>At3g50140.1 68416.m05481 expressed protein contains Pfam profile
PF03140: Plant protein of unknown function
Length = 508
Score = 24.6 bits (51), Expect(2) = 8.5
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +1
Query: 619 KKPXPPXPPPP 651
++P PP PPPP
Sbjct: 7 RRPPPPPPPPP 17
Score = 21.4 bits (43), Expect(2) = 8.5
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = +1
Query: 625 PXPPXPPPPXTXTKKXXXPXL 687
P PP PPP K P +
Sbjct: 27 PPPPPPPPQLPFGPKLPFPHI 47
>At4g16790.1 68417.m02536 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 473
Score = 23.0 bits (47), Expect(2) = 8.5
Identities = 10/34 (29%), Positives = 11/34 (32%)
Frame = +1
Query: 547 PPXLXXGXXXPHPXXFFXFXXHXXKKPXPPXPPP 648
PP +P H P PP PPP
Sbjct: 258 PPSSFSSPRKSNPIPNLASEFHPSPPPPPPPPPP 291
Score = 23.0 bits (47), Expect(2) = 8.5
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 625 PXPPXPPPP 651
P PP PPPP
Sbjct: 329 PPPPPPPPP 337
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,753,735
Number of Sequences: 28952
Number of extensions: 344916
Number of successful extensions: 1575
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1167
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1672953192
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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