Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_O17
(1073 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 27 0.38
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 25 1.2
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 25 1.5
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 23 3.5
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 26.6 bits (56), Expect = 0.38
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 597 PPPPPPPP 620
PPPPPPPP
Sbjct: 1355 PPPPPPPP 1362
Score = 26.6 bits (56), Expect = 0.38
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 598 PPPPPPPP 621
PPPPPPPP
Sbjct: 1355 PPPPPPPP 1362
Score = 25.0 bits (52), Expect = 1.2
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 762 PXPPPPPPXXG 794
P PPPPPP G
Sbjct: 1355 PPPPPPPPSSG 1365
Score = 23.4 bits (48), Expect = 3.5
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -2
Query: 565 KKKXXXPPPPPPXXGR 518
+++ PPPPPP G+
Sbjct: 1351 RQQQPPPPPPPPSSGQ 1366
Score = 23.4 bits (48), Expect = 3.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 1045 PXPPPPPP 1068
P PPPPPP
Sbjct: 1355 PPPPPPPP 1362
Score = 22.6 bits (46), Expect = 6.2
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 768 PPPPPPXXGG 797
PPPPPP G
Sbjct: 1356 PPPPPPPSSG 1365
Score = 22.6 bits (46), Expect = 6.2
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 769 PPPPPPXXGG 798
PPPPPP G
Sbjct: 1356 PPPPPPPSSG 1365
Score = 22.2 bits (45), Expect = 8.2
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2
Query: 647 PPPPPPXXXG 676
PPPPPP G
Sbjct: 1356 PPPPPPPSSG 1365
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 25.0 bits (52), Expect = 1.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 762 PXPPPPPPXXGG 797
P PPPPPP G
Sbjct: 341 PAPPPPPPSSSG 352
Score = 23.8 bits (49), Expect = 2.7
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 647 PPPPPPXXXGXXRXKXKK 700
PPPPPP G K K
Sbjct: 343 PPPPPPSSSGPDSAKLDK 360
Score = 23.4 bits (48), Expect = 3.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 597 PPPPPPPP 620
P PPPPPP
Sbjct: 341 PAPPPPPP 348
Score = 23.4 bits (48), Expect = 3.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 598 PPPPPPPP 621
P PPPPPP
Sbjct: 341 PAPPPPPP 348
Score = 23.4 bits (48), Expect = 3.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 1045 PXPPPPPP 1068
P PPPPPP
Sbjct: 341 PAPPPPPP 348
Score = 23.0 bits (47), Expect = 4.7
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 597 PPPPPPPPP 623
PP P PPPP
Sbjct: 338 PPKPAPPPP 346
Score = 23.0 bits (47), Expect = 4.7
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 597 PPPPPPPPP 623
P P PPPPP
Sbjct: 339 PKPAPPPPP 347
Score = 22.6 bits (46), Expect = 6.2
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 769 PPPPPPXXGG 798
PPPPPP G
Sbjct: 343 PPPPPPSSSG 352
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 24.6 bits (51), Expect = 1.5
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 1030 PXXXXPXPPPPPP 1068
P P PPPPPP
Sbjct: 1852 PVSGSPEPPPPPP 1864
Score = 23.4 bits (48), Expect = 3.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 595 PPPPPPPP 618
P PPPPPP
Sbjct: 1857 PEPPPPPP 1864
Score = 23.4 bits (48), Expect = 3.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 598 PPPPPPPP 621
P PPPPPP
Sbjct: 1857 PEPPPPPP 1864
Score = 23.4 bits (48), Expect = 3.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 762 PXPPPPPP 785
P PPPPPP
Sbjct: 1857 PEPPPPPP 1864
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 23.4 bits (48), Expect = 3.5
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -3
Query: 660 GGGGGXXXXXXXXGGGGGGGG 598
G GG GGGGGG G
Sbjct: 33 GASGGSIVVGANNGGGGGGLG 53
Score = 22.2 bits (45), Expect = 8.2
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 771 PPPPPXXGG 797
PPPPP GG
Sbjct: 376 PPPPPIRGG 384
Score = 22.2 bits (45), Expect = 8.2
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 772 PPPPPXXGG 798
PPPPP GG
Sbjct: 376 PPPPPIRGG 384
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.317 0.157 0.581
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 254,534
Number of Sequences: 438
Number of extensions: 9337
Number of successful extensions: 65
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 35909298
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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