Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_O16
         (863 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   3.1  
EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    22   7.1  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   7.1  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.4  

>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 541 SSLPVYRARXPPASXQRSEAGPRGEPEPTST 449
           S   V  ++  PA+  RS A P G P P+++
Sbjct: 200 SPTKVKASKASPAAAPRSVATPTGIPTPSTS 230


>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
           acetylcholinesterase protein.
          Length = 50

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +3

Query: 180 PQRLRNRHH 206
           PQRLR RHH
Sbjct: 21  PQRLRIRHH 29


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 487 EAGPRGEPEPTSTCRSARTRSA 422
           E  P  EP+PT T  S  T+++
Sbjct: 394 EPVPTPEPQPTQTTESEPTQAS 415


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +3

Query: 138 GFDRRRGWRQVCRTPQRLRNRHHHQG 215
           G D++  W + CR  ++L  R +  G
Sbjct: 579 GLDQQNQWCKPCRPREQLTWRRNFHG 604


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +3

Query: 138 GFDRRRGWRQVCRTPQRLRNRHHHQG 215
           G D++  W + CR  ++L  R +  G
Sbjct: 471 GLDQQNQWCKPCRPREQLTWRRNFHG 496


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,713
Number of Sequences: 336
Number of extensions: 3008
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23789590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)