Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_O16
(863 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83219-1|CAB05694.1| 322|Caenorhabditis elegans Hypothetical pr... 129 3e-30
U53341-1|AAC69110.3| 727|Caenorhabditis elegans Hypothetical pr... 48 1e-05
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 35 0.086
AC025716-21|AAT39978.1| 586|Caenorhabditis elegans Hypothetical... 31 1.1
AC025716-20|AAT39977.2| 946|Caenorhabditis elegans Hypothetical... 31 1.1
U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical pr... 30 1.9
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 30 2.4
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 30 2.4
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z77663-10|CAB01204.1| 543|Caenorhabditis elegans Hypothetical p... 29 3.2
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 7.5
U00066-9|AAA50743.3| 780|Caenorhabditis elegans Mediator protei... 28 7.5
U00066-8|AAM54164.1| 777|Caenorhabditis elegans Mediator protei... 28 7.5
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 28 9.9
AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical ... 28 9.9
>Z83219-1|CAB05694.1| 322|Caenorhabditis elegans Hypothetical
protein C31C9.2 protein.
Length = 322
Score = 129 bits (311), Expect = 3e-30
Identities = 65/123 (52%), Positives = 85/123 (69%), Gaps = 1/123 (0%)
Frame = +1
Query: 118 MVVDIKSVLIVDGVGAKCAELLNAYGIATTTKAKISKEELLMEIPNHDALVVRSATQVTK 297
M I VLI D + +C ++L GI T K K +K+ELL+ +P HDA++VRSAT++T
Sbjct: 1 MSAPINKVLIADDIEQECVDILKQNGIEVTVKTKQTKDELLVTLPQHDAVIVRSATKITA 60
Query: 298 EVLDAGV-KLKVVGRAGAGVDNIDVXSAGKKGVGVINAPGANALSACELTCTLMLVLARH 474
E+L A KLK+VGRAG GVDNIDV +A + V+N P AN+ SA ELTCTL+L L+RH
Sbjct: 61 ELLAASAGKLKLVGRAGTGVDNIDVPAASANKILVMNTPQANSRSAAELTCTLILSLSRH 120
Query: 475 VVQ 483
V Q
Sbjct: 121 VPQ 123
Score = 56.0 bits (129), Expect = 3e-08
Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 1/137 (0%)
Frame = +3
Query: 402 QRSGRQCAERVRADLHVDVGSGSPRGPASLR*XLAGGX-RALYTGSELAGXXLXILGLGR 578
Q + R AE + L + + P+ AS++ AG R + G E+ G L +LGLGR
Sbjct: 100 QANSRSAAE-LTCTLILSLSRHVPQAAASMK---AGKWARKDFMGEEVYGRTLAVLGLGR 155
Query: 579 VGXXVATXMYAFXMNIIGFQPFRVC*SVRPVPLHXXGAGGXFGPLTDXITLHTPVIEXTX 758
+G VA + AF M +IGF P + + P D IT+H P+I+ T
Sbjct: 156 IGSEVAVRLQAFGMKVIGFDPMVTKEQAEAKNIELLSLEQIW-PQADYITVHVPLIKQTE 214
Query: 759 XLYPXPMS*XQCXKGVK 809
L + +C KGV+
Sbjct: 215 NLI-NKETLAKCKKGVR 230
>U53341-1|AAC69110.3| 727|Caenorhabditis elegans Hypothetical
protein F49E10.5 protein.
Length = 727
Score = 47.6 bits (108), Expect = 1e-05
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +1
Query: 223 SKEELLMEIPNHD-ALVVRSATQVTKEVLDAGVKLKVVGRAGAGVDNIDVXSAGKKGVGV 399
S +E+ ++ N A ++ + ++ KE L+ LKVV R G G+DNIDV +A + G+ V
Sbjct: 209 STQEIHEKVLNEAVAALMYHSIKLEKEDLEKFKVLKVVFRIGYGIDNIDVKAATELGIAV 268
Query: 400 INAPGANALSACELTCTLMLVLAR 471
+APG + T +L+L L R
Sbjct: 269 CHAPGDYVEDVADSTLSLILDLFR 292
Score = 33.5 bits (73), Expect = 0.20
Identities = 27/90 (30%), Positives = 39/90 (43%)
Frame = +3
Query: 537 ELAGXXLXILGLGRVGXXVATXMYAFXMNIIGFQPFRVC*SVRPVPLHXXGAGGXFGPLT 716
++ G L ILG GRVG V AF ++II + PF + + F +
Sbjct: 322 KVRGSVLGILGCGRVGTAVGLRARAFGLHIIFYDPFVREGHDKALGFERVYTMDEFMSRS 381
Query: 717 DXITLHTPVIEXTXXLYPXPMS*XQCXKGV 806
D I+LH + + T + S QC GV
Sbjct: 382 DCISLHCNLGDETRGIINAD-SLRQCKSGV 410
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 34.7 bits (76), Expect = 0.086
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = -1
Query: 518 PXPTCQXSAQ*SWTTWRARTNINVQVSSHALSALAPGALITPTPFLPAEXTSMLSTPA-P 342
P P+ S + TT ++ + S + P + + TP P T+M STP P
Sbjct: 153 PTPSTMKSTPTTPTTIKSTPTTPTTMKSTPTTPTTPTTMKS-TPTTPTTPTTMKSTPTTP 211
Query: 341 ARPTTFSFTPASNTSLVT*VAERTT 267
PTT TP + T+ T + TT
Sbjct: 212 TTPTTMKSTPTTPTTPTTMKSTPTT 236
Score = 32.7 bits (71), Expect = 0.35
Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 7/111 (6%)
Frame = -1
Query: 578 PAKAKDGEXXPSELAASVQSPX-PTCQXSAQ*SWTTWRARTNINVQVSSHALSALAPGAL 402
P K P+ + ++ +P PT S + TT + ++ P
Sbjct: 165 PTTIKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTP 224
Query: 401 ITPT-----PFLPAEXTSMLSTPA-PARPTTFSFTPASNTSLVT*VAERTT 267
TPT P P T+M STP P PTT TP + T+ T + TT
Sbjct: 225 TTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTT 275
Score = 32.7 bits (71), Expect = 0.35
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Frame = -1
Query: 548 PSELAASVQSPX-PTCQXSAQ*SWTTWRARTNINVQVSSHALSALAPGALIT--PTPFLP 378
P+ + ++ +P PT S + TT ++ ++ + P T TP P
Sbjct: 266 PTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTP 325
Query: 377 AEXTSMLSTPA-PARPTTFSFTPASNTSLVT*VAERTT 267
T+M STP P PTT TP + T+ T + TT
Sbjct: 326 TTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTT 363
Score = 32.7 bits (71), Expect = 0.35
Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 7/111 (6%)
Frame = -1
Query: 578 PAKAKDGEXXPSELAASVQSPX-PTCQXSAQ*SWTTWRARTNINVQVSSHALSALAPGAL 402
P K P+ + ++ +P PT S + TT + ++ P
Sbjct: 279 PTTMKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTP 338
Query: 401 ITPT-----PFLPAEXTSMLSTPA-PARPTTFSFTPASNTSLVT*VAERTT 267
TPT P P T+M STP P PTT TP + T+ T + TT
Sbjct: 339 TTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTT 389
Score = 32.3 bits (70), Expect = 0.46
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 392 TPFLPAEXTSMLSTPA-PARPTTFSFTPASNTSLVT*VAERTT 267
TP P T+M STP P PTT TP + T+ T + TT
Sbjct: 246 TPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTT 288
Score = 32.3 bits (70), Expect = 0.46
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -1
Query: 392 TPFLPAEXTSMLSTPA-PARPTTFSFTPASNTSLVT*VAERTT 267
TP P T+M STP P PTT TP + T+ T + TT
Sbjct: 360 TPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTT 402
Score = 30.7 bits (66), Expect = 1.4
Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
Frame = -1
Query: 548 PSELAASVQSPX-PTCQXSAQ*SWTTWRARTNINVQVSSHALSALAPGALITPTPF--LP 378
P+ + ++ +P PT S + TT + ++ P TPT P
Sbjct: 227 PTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTP 286
Query: 377 AEXTSMLSTPA-PARPTTFSFTPASNTSLVT*VAERTT 267
T+M STP P PTT TP + T+ T + TT
Sbjct: 287 TTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTT 324
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -1
Query: 392 TPFLPAEXTSMLSTPAPARPTTFSFTPASNTSLVT*VAERTT 267
TP P T+M STP PTT TP + T+ T + TT
Sbjct: 386 TPTTPTTPTTMKSTPTT--PTTMKSTPTTPTTPTTMKSTPTT 425
>AC025716-21|AAT39978.1| 586|Caenorhabditis elegans Hypothetical
protein Y39G10AR.18b protein.
Length = 586
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = -1
Query: 464 RTNINVQVSSHALSALAPGALITPTPFLPAEXTSMLSTPAPARPTTFSFTP 312
R+N ++ SS + P A P P +PA + STP PA P + +P
Sbjct: 150 RSN-SISHSSDVIRPSQPKATAPPPPLVPAPARATASTPPPAPPAARAQSP 199
>AC025716-20|AAT39977.2| 946|Caenorhabditis elegans Hypothetical
protein Y39G10AR.18a protein.
Length = 946
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = -1
Query: 464 RTNINVQVSSHALSALAPGALITPTPFLPAEXTSMLSTPAPARPTTFSFTP 312
R+N ++ SS + P A P P +PA + STP PA P + +P
Sbjct: 510 RSN-SISHSSDVIRPSQPKATAPPPPLVPAPARATASTPPPAPPAARAQSP 559
>U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical
protein F25E2.2 protein.
Length = 624
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 395 PTPFLPAEXTSMLSTPAPARPTTFSFTPASNTS 297
PT LP T+ +TP P TT + TPA T+
Sbjct: 414 PTTPLPTTTTTTTTTPKPTTTTTTTTTPAPTTT 446
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = -1
Query: 398 TPTPFLPAEXTSMLSTPAPA---RPTTFSFTPASNTSLVT 288
T TP P T+ +TPAP +PTT + TPA T+ T
Sbjct: 426 TTTP-KPTTTTTTTTTPAPTTTQKPTTTTTTPAPTTTSTT 464
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 29.9 bits (64), Expect = 2.4
Identities = 28/111 (25%), Positives = 39/111 (35%), Gaps = 3/111 (2%)
Frame = -1
Query: 440 SSHALSALAPGALITPT--PFLPAEXTSMLSTPA-PARPTTFSFTPASNTSLVT*VAERT 270
S+ S AP L TPT P P T+ + P P PTT P T+ T T
Sbjct: 634 STVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTT 693
Query: 269 TRASWLGISIRSSSLEXXXXXXXXXXXXLRSSAHLAPTPSTIKTDLMSTTI 117
T + + +++ R A P+T +TTI
Sbjct: 694 TTTTTTTTTTQTTPTTPVVTTPSTITPTTRPVTQPASQPATQPATTPTTTI 744
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical protein
C12D12.1c protein.
Length = 825
Score = 29.9 bits (64), Expect = 2.4
Identities = 28/111 (25%), Positives = 39/111 (35%), Gaps = 3/111 (2%)
Frame = -1
Query: 440 SSHALSALAPGALITPT--PFLPAEXTSMLSTPA-PARPTTFSFTPASNTSLVT*VAERT 270
S+ S AP L TPT P P T+ + P P PTT P T+ T T
Sbjct: 690 STVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTT 749
Query: 269 TRASWLGISIRSSSLEXXXXXXXXXXXXLRSSAHLAPTPSTIKTDLMSTTI 117
T + + +++ R A P+T +TTI
Sbjct: 750 TTTTTTTTTTQTTPTTPVVTTPSTITPTTRPVTQPASQPATQPATTPTTTI 800
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 29.9 bits (64), Expect = 2.4
Identities = 28/112 (25%), Positives = 39/112 (34%), Gaps = 3/112 (2%)
Frame = -1
Query: 443 VSSHALSALAPGALITPT--PFLPAEXTSMLSTPA-PARPTTFSFTPASNTSLVT*VAER 273
V + S AP L TPT P P T+ + P P PTT P T+ T
Sbjct: 512 VGTIGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTST 571
Query: 272 TTRASWLGISIRSSSLEXXXXXXXXXXXXLRSSAHLAPTPSTIKTDLMSTTI 117
TT + + +++ R A P+T +TTI
Sbjct: 572 TTTTTTTTTTTQTTPTTPVVTTPSTITPTTRPVTQPASQPATQPATTPTTTI 623
>Z77663-10|CAB01204.1| 543|Caenorhabditis elegans Hypothetical
protein F53F4.11 protein.
Length = 543
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -1
Query: 398 TPTPFLPAEXT-SMLSTPAPARPTTFSFTPASNT 300
TP P P+ T S + TPAP PT + TP T
Sbjct: 55 TPAPKTPSRTTKSTVDTPAPKTPTRAAKTPVVKT 88
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = -2
Query: 583 PTLPRPRMXRXCPASSLPVYRARXPPASXQRSEAGPRGEPEPTSTCRS 440
P P PR+ R P S P R P S QR PEP + R+
Sbjct: 139 PPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRT 186
>U00066-9|AAA50743.3| 780|Caenorhabditis elegans Mediator protein
15, isoform a protein.
Length = 780
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -2
Query: 547 PASSLPVYRARXPPASXQRSEAGPRGEPEPTSTCRSARTRSA 422
PA P YRA PP Q + A R P +T +++ T SA
Sbjct: 100 PAGGTPGYRAPVPP-DPQPTSAQARNPPVTVATTQASTTPSA 140
>U00066-8|AAM54164.1| 777|Caenorhabditis elegans Mediator protein
15, isoform b protein.
Length = 777
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -2
Query: 547 PASSLPVYRARXPPASXQRSEAGPRGEPEPTSTCRSARTRSA 422
PA P YRA PP Q + A R P +T +++ T SA
Sbjct: 97 PAGGTPGYRAPVPP-DPQPTSAQARNPPVTVATTQASTTPSA 137
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = -2
Query: 574 PRPRMXRXCPASSLPVYRARXPPASXQRSEAGPRGEPEP 458
P PR R S P + PPA +RS + + P P
Sbjct: 386 PAPRRRRSPSKSRSPAPKREIPPARRRRSPSASKSPPAP 424
>AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical
protein Y41D4B.18 protein.
Length = 338
Score = 27.9 bits (59), Expect = 9.9
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = -1
Query: 479 TTWRARTNINVQVSSHALSALAPGALITP-TPFLP-AEXTSMLSTPAPARPTTFSFTPAS 306
T+ A TN+ + S P +P T P + TS S+PAP P T S +
Sbjct: 243 TSTPAPTNLPTTTGAPTNSTTNPPTATSPKTSSQPVSSSTSSTSSPAPTNPPTTSRPTTA 302
Query: 305 NTSLVT*VAERTTR 264
+ S + E TT+
Sbjct: 303 SQSTASQNVETTTK 316
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,965,638
Number of Sequences: 27780
Number of extensions: 287394
Number of successful extensions: 1006
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 994
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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