Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_O14
         (859 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0486 - 6404315-6404333,6404803-6405260                           31   0.89 
02_04_0231 + 21117887-21117935,21118710-21118825,21119049-211191...    31   1.6  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.3  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.3  

>04_01_0486 - 6404315-6404333,6404803-6405260
          Length = 158

 Score = 31.5 bits (68), Expect = 0.89
 Identities = 29/88 (32%), Positives = 37/88 (42%)
 Frame = -3

Query: 743 GGYGXRRXAXPKGEERADRYPVSGQGREQESAXGEXSQGETAWYLYSPVGXRPPXT*ASI 564
           GG G RR     G  R  R   +  G  ++ A G    GE A  + SP G  PP      
Sbjct: 47  GGGGGRRGGASGGRGRRGRQRAAQGGGGRQRARGG---GEVA--VVSPPGRSPPLR---- 97

Query: 563 FVMLVQGGRRPMEKRQQRGLFTVXGLLL 480
              + Q GRR   +R +RGL    G L+
Sbjct: 98  --QIWQEGRRRQGRRARRGLVVAGGGLV 123


>02_04_0231 +
           21117887-21117935,21118710-21118825,21119049-21119144,
           21119276-21119332,21119547-21119699,21119801-21119885,
           21120022-21120139,21120278-21120442,21120795-21120914,
           21121006-21121081,21121247-21121418,21121574-21122049,
           21122130-21122320,21124348-21124583,21125799-21125959
          Length = 756

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +1

Query: 595 PTGL*RYQAVSPWEXSPXALSCSRPCPLTGYRSALSSP 708
           P+ + R   VSPWE  P A+S S+P P    R+  + P
Sbjct: 351 PSVVPRPDRVSPWELEPLAVSNSQPSPQPPARNKRARP 388


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +1

Query: 346 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEXKASKRPXTV 501
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 295 NESAN---ARGEAVCVLGALPLPRSLTRCAR 378
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,517,303
Number of Sequences: 37544
Number of extensions: 342568
Number of successful extensions: 1021
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1019
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)