Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_O14
         (859 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80032-2|AAM15555.1|  643|Caenorhabditis elegans Osmotic stress ...    30   1.8  
AY360470-1|AAR12229.1|  643|Caenorhabditis elegans osmotic stres...    30   1.8  
AL117200-14|CAJ85779.1|  465|Caenorhabditis elegans Hypothetical...    29   5.6  
AL117200-12|CAB60583.1|  461|Caenorhabditis elegans Hypothetical...    29   5.6  
AL117200-11|CAD54172.1|  530|Caenorhabditis elegans Hypothetical...    29   5.6  
U97002-4|AAB52267.1|  630|Caenorhabditis elegans Hypothetical pr...    28   9.8  

>U80032-2|AAM15555.1|  643|Caenorhabditis elegans Osmotic stress
           resistant protein 1 protein.
          Length = 643

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 20/49 (40%), Positives = 24/49 (48%)
 Frame = +3

Query: 531 RPPPPLXEHHKNRRSXXRWAXPDXTIKIPGXFPLGXLPSCALLFPTLPA 677
           RP PPL    K R +  RW   +   +IPG      LPS   L PT+PA
Sbjct: 543 RPIPPLFFEPKGRHTRLRWTGANEK-EIPGLGSRFILPS---LDPTMPA 587


>AY360470-1|AAR12229.1|  643|Caenorhabditis elegans osmotic stress
           resistance protein protein.
          Length = 643

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 20/49 (40%), Positives = 24/49 (48%)
 Frame = +3

Query: 531 RPPPPLXEHHKNRRSXXRWAXPDXTIKIPGXFPLGXLPSCALLFPTLPA 677
           RP PPL    K R +  RW   +   +IPG      LPS   L PT+PA
Sbjct: 543 RPIPPLFFEPKGRHTRLRWTGANEK-EIPGLGSRFILPS---LDPTMPA 587


>AL117200-14|CAJ85779.1|  465|Caenorhabditis elegans Hypothetical
           protein Y50E8A.4c protein.
          Length = 465

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 528 HRPPPPLXEHHKNR 569
           H+PPPP+  HH+N+
Sbjct: 14  HQPPPPVPHHHQNQ 27


>AL117200-12|CAB60583.1|  461|Caenorhabditis elegans Hypothetical
           protein Y50E8A.4b protein.
          Length = 461

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 528 HRPPPPLXEHHKNR 569
           H+PPPP+  HH+N+
Sbjct: 14  HQPPPPVPHHHQNQ 27


>AL117200-11|CAD54172.1|  530|Caenorhabditis elegans Hypothetical
           protein Y50E8A.4a protein.
          Length = 530

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 528 HRPPPPLXEHHKNR 569
           H+PPPP+  HH+N+
Sbjct: 83  HQPPPPVPHHHQNQ 96


>U97002-4|AAB52267.1|  630|Caenorhabditis elegans Hypothetical
           protein K09H11.4 protein.
          Length = 630

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 743 GGYGXRRXAXPKGEERADRYPVSGQGREQE 654
           GG+G RR   P   E  DR+    +GR+Q+
Sbjct: 130 GGHGFRRPHLPDPTEVKDRFDKEREGRKQQ 159


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,545,436
Number of Sequences: 27780
Number of extensions: 258058
Number of successful extensions: 577
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 576
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)