Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_O13
         (855 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624...    31   0.89 
12_02_1039 + 25610200-25610538,25611022-25611143,25611243-256113...    30   2.0  
12_01_1025 - 10506144-10506226,10506643-10506699,10507502-105076...    30   2.7  
11_01_0419 + 3226224-3226756,3228010-3228169,3228256-3228435,322...    29   3.6  
08_02_1132 - 24530921-24532906                                         29   4.7  
06_02_0019 - 10656005-10657511,10657712-10658739                       29   4.7  
02_03_0412 - 18749430-18749587,18749696-18749857,18750062-187501...    28   8.3  

>03_02_0186 -
           6243487-6243799,6243892-6244400,6244495-6244557,
           6245482-6245681,6246125-6246519,6246776-6246888
          Length = 530

 Score = 31.5 bits (68), Expect = 0.89
 Identities = 15/25 (60%), Positives = 15/25 (60%)
 Frame = +1

Query: 451 CLFCACASQSRSILVCLLHRCYPAP 525
           CLFC     SR ILVC L RC  AP
Sbjct: 58  CLFCEANFISRRILVCDLLRCLVAP 82


>12_02_1039 +
           25610200-25610538,25611022-25611143,25611243-25611390,
           25611681-25611818,25612106-25612165,25612234-25612392,
           25612714-25612912,25613156-25613260,25613339-25613475,
           25613812-25614037,25614119-25614282,25614408-25614524,
           25614622-25614864,25614959-25615054,25615270-25615287
          Length = 756

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
 Frame = +2

Query: 512 VIQRP-DCHGFVVPAPYEVYPKMFMNMEVLQKIYVTKMQHGLXNPEAAAKYGIHXGKPTT 688
           ++QRP D    V+ A  E      +N  +++K Y+T+ +H    P   A++  H G+   
Sbjct: 207 IVQRPEDFVDSVLSAQREAAASFGINTLLVEK-YITQPRHIEVQPNVTAQFRSHIGEAAV 265

Query: 689 SFTKPIILTPFYTI 730
           S  K + +   Y +
Sbjct: 266 SAAKFLFIIVVYIL 279


>12_01_1025 -
           10506144-10506226,10506643-10506699,10507502-10507605,
           10507884-10507937,10508107-10508193,10509027-10509214,
           10509793-10509854,10510084-10510354,10510756-10510834,
           10511715-10511913,10512816-10512960,10513324-10513416,
           10514449-10514736
          Length = 569

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +2

Query: 434 ETFYKSACFARVHLNQGQFLYAF-YIAVIQRPDCHGF 541
           ETF+ +AC  R HL QG+ + A+ Y+   +  DC GF
Sbjct: 427 ETFFTTACMGRGHLCQGKLVDAYRYLHKEKDMDC-GF 462


>11_01_0419 +
           3226224-3226756,3228010-3228169,3228256-3228435,
           3228525-3228659,3229262-3229344,3229442-3229535,
           3229649-3229735
          Length = 423

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = -3

Query: 586 IHKHFRVYFIRSRNNETVAIRALDNSDVEGIQELTLIEMHT 464
           IHK FR++  R  + E +AIRA  NS +     L L +M T
Sbjct: 319 IHKPFRIHLGRGLHGECLAIRADGNSKLSHEIGLELSKMST 359


>08_02_1132 - 24530921-24532906
          Length = 661

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 18/82 (21%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
 Frame = -1

Query: 750 CQPLVFIIV*NGVRIIGFVNEVVGFPX*MPYLAAASGXMRPCCIFVT*IFCSTSI-FINI 574
           C  L+ +++ +GV+I+G     + F   + +++ AS  M    + +  +F   +  ++++
Sbjct: 358 CPKLLCVMIGDGVQILGMAIVTIIFST-LGFMSPASRGMLLTGMIILYLFLGIAAGYVSV 416

Query: 573 LGYTSYGAGTTKPWQSGRWITA 508
             + +   GT++ W+S  W+TA
Sbjct: 417 RLWKTI-KGTSEGWRSVSWLTA 437


>06_02_0019 - 10656005-10657511,10657712-10658739
          Length = 844

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 10/32 (31%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
 Frame = -1

Query: 597 STSIFINILGY-TSYGAGTTKPWQSGRWITAM 505
           +T+I ++++G   +YGAG+++ W++  ++ AM
Sbjct: 750 NTTIVLDMIGLLVAYGAGSSREWETSGYVIAM 781


>02_03_0412 -
           18749430-18749587,18749696-18749857,18750062-18750194,
           18751640-18751744,18751818-18751935,18752232-18752320,
           18752407-18753660,18753785-18753831,18754285-18754339,
           18754783-18754884
          Length = 740

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
 Frame = -3

Query: 652 CGFRIXEAMLHLCYVNFLQHFHIHKHFRVYFI-RSRNNETVAIRAL-DNSDVE 500
           C   I    L+  Y+  +QHFH+  +     + RS+N+ T +I+ L D S ++
Sbjct: 278 CFMMISTKELYTIYITQVQHFHVGDNVTFTLLSRSKNSLTPSIKNLTDESTID 330


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,694,987
Number of Sequences: 37544
Number of extensions: 379434
Number of successful extensions: 765
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)