Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_O12
(1234 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 27 0.38
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 26 0.67
DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein. 24 2.7
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 23 4.7
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 23 4.7
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 23 4.7
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 23 4.7
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 23 4.7
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 23 4.7
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 23 4.7
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 23 4.7
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 26.6 bits (56), Expect = 0.38
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 341 GGGXGGXXXGXXGEGGG 291
GGG GG G G+GGG
Sbjct: 92 GGGRGGGRDGDRGDGGG 108
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 25.8 bits (54), Expect = 0.67
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 110 PXXXPPPPPPPPXPXXPPXPXXXPXRXXPPXXXRPXPPXPPPXPPPPXPP 259
P P P P P PP PP P P PP PP P
Sbjct: 149 PKYEPNPSIIDPGPALPPTGFLC--NNYPPLPQVPPLPLPPIFPPTMINP 196
>DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein.
Length = 822
Score = 23.8 bits (49), Expect = 2.7
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 122 PPPPPPP 142
PPPPPPP
Sbjct: 731 PPPPPPP 737
Score = 23.8 bits (49), Expect = 2.7
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 125 PPPPPPP 145
PPPPPPP
Sbjct: 731 PPPPPPP 737
Score = 23.8 bits (49), Expect = 2.7
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 362 PPPPPPP 382
PPPPPPP
Sbjct: 731 PPPPPPP 737
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.0 bits (47), Expect = 4.7
Identities = 10/32 (31%), Positives = 10/32 (31%)
Frame = +1
Query: 88 PXXXXXXPPXXXPPPPXXPXXPPXPXXXXXPG 183
P PP PP P P P PG
Sbjct: 32 PNANSTYPPACYSPPQVAPQYPQHPYAAPAPG 63
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.0 bits (47), Expect = 4.7
Identities = 10/32 (31%), Positives = 10/32 (31%)
Frame = +1
Query: 88 PXXXXXXPPXXXPPPPXXPXXPPXPXXXXXPG 183
P PP PP P P P PG
Sbjct: 32 PNANSTYPPACYSPPQVAPQYPQHPYAAPAPG 63
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 23.0 bits (47), Expect = 4.7
Identities = 10/32 (31%), Positives = 10/32 (31%)
Frame = +1
Query: 88 PXXXXXXPPXXXPPPPXXPXXPPXPXXXXXPG 183
P PP PP P P P PG
Sbjct: 32 PNANSTYPPACYSPPQVAPQYPQHPYAAPAPG 63
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.0 bits (47), Expect = 4.7
Identities = 10/32 (31%), Positives = 10/32 (31%)
Frame = +1
Query: 88 PXXXXXXPPXXXPPPPXXPXXPPXPXXXXXPG 183
P PP PP P P P PG
Sbjct: 32 PNANSTYPPACYSPPQVAPQYPQHPYAAPAPG 63
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 23.0 bits (47), Expect = 4.7
Identities = 10/32 (31%), Positives = 10/32 (31%)
Frame = +1
Query: 88 PXXXXXXPPXXXPPPPXXPXXPPXPXXXXXPG 183
P PP PP P P P PG
Sbjct: 32 PNANSTYPPACYSPPQVAPQYPQHPYAAPAPG 63
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 23.0 bits (47), Expect = 4.7
Identities = 10/32 (31%), Positives = 10/32 (31%)
Frame = +1
Query: 88 PXXXXXXPPXXXPPPPXXPXXPPXPXXXXXPG 183
P PP PP P P P PG
Sbjct: 32 PNANSTYPPACYSPPQVAPQYPQHPYAAPAPG 63
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 23.0 bits (47), Expect = 4.7
Identities = 10/32 (31%), Positives = 10/32 (31%)
Frame = +1
Query: 88 PXXXXXXPPXXXPPPPXXPXXPPXPXXXXXPG 183
P PP PP P P P PG
Sbjct: 32 PNANSTYPPACYSPPQVAPQYPQHPYAAPAPG 63
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 23.0 bits (47), Expect = 4.7
Identities = 10/32 (31%), Positives = 10/32 (31%)
Frame = +1
Query: 88 PXXXXXXPPXXXPPPPXXPXXPPXPXXXXXPG 183
P PP PP P P P PG
Sbjct: 32 PNANSTYPPACYSPPQVAPQYPQHPYAAPAPG 63
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,568
Number of Sequences: 336
Number of extensions: 5010
Number of successful extensions: 37
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 36069111
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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