Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_O11
         (887 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P48821 Cluster: Antibacterial peptide enbocin precursor...    63   8e-09
UniRef50_A7QEZ5 Cluster: Chromosome chr16 scaffold_86, whole gen...    34   5.6  

>UniRef50_P48821 Cluster: Antibacterial peptide enbocin precursor;
           n=5; Ditrysia|Rep: Antibacterial peptide enbocin
           precursor - Bombyx mori (Silk moth)
          Length = 59

 Score = 63.3 bits (147), Expect = 8e-09
 Identities = 30/34 (88%), Positives = 30/34 (88%)
 Frame = +2

Query: 122 FSWFVVVFATASAKPWNFFKEIERAVARTRDAVI 223
           F  FVVVFATAS KPWN FKEIERAVARTRDAVI
Sbjct: 8   FFLFVVVFATASGKPWNIFKEIERAVARTRDAVI 41


>UniRef50_A7QEZ5 Cluster: Chromosome chr16 scaffold_86, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr16 scaffold_86, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 251

 Score = 33.9 bits (74), Expect = 5.6
 Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
 Frame = -1

Query: 539 YYMIHYTL*VYTSELFVFYIKQFVNAS*PDPTEQTHSICNLYLNTNFIQ-WSSLDFINQG 363
           Y MIH  L VY+ + F+ Y+K  + ++ P  T Q  S  +  L    ++ W+S   ++Q 
Sbjct: 23  YTMIHKWLNVYSDKNFLPYLKSLLMSNIPGMTSQVSSCLSFILPRKLLKDWAS---VSQH 79

Query: 362 KYCSEL 345
            +C EL
Sbjct: 80  LHCYEL 85


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 644,040,872
Number of Sequences: 1657284
Number of extensions: 11190296
Number of successful extensions: 31484
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 30100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31431
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79932179145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)