Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_O11
         (887 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81581-2|CAD56595.1|  672|Caenorhabditis elegans Hypothetical pr...    29   5.9  
Z81581-1|CAD56594.1|  655|Caenorhabditis elegans Hypothetical pr...    29   5.9  
Z81542-6|CAE17834.1|  365|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>Z81581-2|CAD56595.1|  672|Caenorhabditis elegans Hypothetical
           protein F08A10.1c protein.
          Length = 672

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = -2

Query: 325 GHVSLRAVMGTGVLGLAGRDGGSCAYRRHRRTRADD 218
           GH+ L A  GT V   +G  GGSCA       R +D
Sbjct: 88  GHIQLTA-NGTPVFAYSGGGGGSCAVSPSSSARRED 122


>Z81581-1|CAD56594.1|  655|Caenorhabditis elegans Hypothetical
           protein F08A10.1b protein.
          Length = 655

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = -2

Query: 325 GHVSLRAVMGTGVLGLAGRDGGSCAYRRHRRTRADD 218
           GH+ L A  GT V   +G  GGSCA       R +D
Sbjct: 88  GHIQLTA-NGTPVFAYSGGGGGSCAVSPSSSARRED 122


>Z81542-6|CAE17834.1|  365|Caenorhabditis elegans Hypothetical
           protein F49A5.9 protein.
          Length = 365

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -1

Query: 404 NFIQWSSLDFINQGKYCSELVVRGSSWSRQSASCDG 297
           +F+  SS+D+   G  C    +    W ++S S DG
Sbjct: 154 DFVSNSSVDYFWTGLICKGNTISSCIWDKESGSADG 189


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,839,212
Number of Sequences: 27780
Number of extensions: 272293
Number of successful extensions: 744
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)