Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_O09
         (902 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q92845 Cluster: Kinesin-associated protein 3; n=42; Deu...    35   2.5  
UniRef50_Q7RE41 Cluster: Arabinogalactan protein; n=4; Plasmodiu...    33   7.5  

>UniRef50_Q92845 Cluster: Kinesin-associated protein 3; n=42;
           Deuterostomia|Rep: Kinesin-associated protein 3 - Homo
           sapiens (Human)
          Length = 792

 Score = 35.1 bits (77), Expect = 2.5
 Identities = 12/23 (52%), Positives = 21/23 (91%)
 Frame = +1

Query: 271 VAVLHHVDDYVELLYDDIPEKIK 339
           VA ++ +D+Y+ELLY+DIP+K++
Sbjct: 129 VANINDMDEYIELLYEDIPDKVR 151


>UniRef50_Q7RE41 Cluster: Arabinogalactan protein; n=4;
           Plasmodium|Rep: Arabinogalactan protein - Plasmodium
           yoelii yoelii
          Length = 447

 Score = 33.5 bits (73), Expect = 7.5
 Identities = 14/54 (25%), Positives = 29/54 (53%)
 Frame = +3

Query: 9   YYRPHYREFLRFAFRDRFLGIRQHSSCRYLLTPWVRIHCKIGIVFEFYYYLIFI 170
           Y   +Y + LR++++ +FL I +++  +      +  HCK  +VFE   +  F+
Sbjct: 341 YLSKNYNQILRYSYKGKFLYIYKYTKNQLKGKNMICSHCKSKLVFELQLFSTFV 394


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 528,827,895
Number of Sequences: 1657284
Number of extensions: 7658851
Number of successful extensions: 14368
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14344
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81981722200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)