Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_O05
         (869 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0862 + 21979932-21980057,21982221-21982289,21982394-21982603     32   0.69 
03_03_0074 + 14278725-14278934,14279045-14279806                       31   0.91 
08_02_0432 - 17103230-17103322,17103403-17103542,17104950-171052...    30   2.1  
01_06_0247 + 27851206-27851255,27851382-27851496,27852280-278524...    29   4.8  
03_03_0078 + 14287889-14288098,14289404-14289649                       29   6.4  
03_05_0220 + 22063411-22063468,22063535-22063545,22064478-220646...    28   8.5  
01_01_0772 - 5999333-5999881,6001105-6001315,6001791-6001858           28   8.5  

>08_02_0862 + 21979932-21980057,21982221-21982289,21982394-21982603
          Length = 134

 Score = 31.9 bits (69), Expect = 0.69
 Identities = 9/34 (26%), Positives = 19/34 (55%)
 Frame = -3

Query: 330 HHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPD 229
           + +  D++H+  D H +  D  H+  D++H+  D
Sbjct: 64  YQVSDDFNHVSRDTHEVSCDICHVSDDFYHVSRD 97



 Score = 30.7 bits (66), Expect = 1.6
 Identities = 9/41 (21%), Positives = 20/41 (48%)
 Frame = -3

Query: 351 HQIRXGYHHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPD 229
           H++     H+  D++H+  D   +  D   +  D++H+  D
Sbjct: 78  HEVSCDICHVSDDFYHVSRDTREVSCDTCQVSDDFYHVSRD 118



 Score = 29.5 bits (63), Expect = 3.7
 Identities = 10/41 (24%), Positives = 20/41 (48%)
 Frame = -3

Query: 351 HQIRXGYHHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPD 229
           +Q+   ++H+  D H +  D  H+  D +H+  D   +  D
Sbjct: 64  YQVSDDFNHVSRDTHEVSCDICHVSDDFYHVSRDTREVSCD 104



 Score = 28.7 bits (61), Expect = 6.4
 Identities = 9/38 (23%), Positives = 19/38 (50%)
 Frame = -3

Query: 333 YHHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHH 220
           ++ + P  + +  D +H+  D H +  D  H+  D +H
Sbjct: 56  HNRMIPSRYQVSDDFNHVSRDTHEVSCDICHVSDDFYH 93


>03_03_0074 + 14278725-14278934,14279045-14279806
          Length = 323

 Score = 31.5 bits (68), Expect = 0.91
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +2

Query: 71  ASVLKMKITIACLILIVTACYGYPYGYGHES 163
           AS +K+ + +AC + + +AC+G   GY  +S
Sbjct: 3   ASGMKLAVAVACALALASACHGLQLGYYKQS 33


>08_02_0432 -
           17103230-17103322,17103403-17103542,17104950-17105211,
           17105391-17105495,17105496-17105558,17106876-17107022
          Length = 269

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = -3

Query: 324 IRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPD 229
           +  D++H+  D H +  D  H+  D++H+  D
Sbjct: 71  VSDDFNHVLRDTHEVLCDTCHVSGDFYHVSRD 102



 Score = 28.3 bits (60), Expect = 8.5
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = -3

Query: 348 QIRXGYHHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIR 235
           Q+   ++H+  D H +  D  H+  D +H+  D   +R
Sbjct: 70  QVSDDFNHVLRDTHEVLCDTCHVSGDFYHVSRDTREMR 107


>01_06_0247 +
           27851206-27851255,27851382-27851496,27852280-27852468,
           27853698-27854057,27854138-27854201,27854365-27854504,
           27854610-27854918,27855135-27855389
          Length = 493

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 10/41 (24%), Positives = 20/41 (48%)
 Frame = -3

Query: 351 HQIRXGYHHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPD 229
           +Q+   ++H+  D H +  D  H+  D +H+  D   +  D
Sbjct: 75  YQVPDNFNHVSRDTHEVSCDTCHVLDDFYHVSRDTREVSCD 115


>03_03_0078 + 14287889-14288098,14289404-14289649
          Length = 151

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 71  ASVLKMKITIACLILIVTACYGYPYGYGHES 163
           A  +K+ + + C +L+  AC G   GY  +S
Sbjct: 3   AHTIKLAVAVTCTLLLAAACSGLEVGYYKKS 33


>03_05_0220 +
           22063411-22063468,22063535-22063545,22064478-22064609,
           22064696-22065799,22065874-22066566,22066968-22067019,
           22067861-22067916,22067917-22068063
          Length = 750

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 8/36 (22%), Positives = 19/36 (52%)
 Frame = -3

Query: 330 HHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCH 223
           + +  D++H+  D   I  D + +  D++H+  D +
Sbjct: 701 YQVSDDFYHVSGDTREISCDTYQVLDDFYHVSGDTY 736


>01_01_0772 - 5999333-5999881,6001105-6001315,6001791-6001858
          Length = 275

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 9/38 (23%), Positives = 18/38 (47%)
 Frame = -3

Query: 333 YHHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHH 220
           ++H+  D   +  D +H+  D H +  D   +  D +H
Sbjct: 28  FYHVSRDTRKVSYDFNHVSRDTHEVSCDTCRVSDDFYH 65


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,249,416
Number of Sequences: 37544
Number of extensions: 145916
Number of successful extensions: 638
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 625
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)