BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_O05
(869 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF043440-1|AAC05665.1| 234|Anopheles gambiae putative pupal-spe... 29 0.14
AF043441-1|AAC05666.1| 231|Anopheles gambiae putative pupal-spe... 28 0.32
AF043438-1|AAC05663.1| 231|Anopheles gambiae putative pupal-spe... 28 0.32
AF043435-1|AAC05660.1| 231|Anopheles gambiae pupal-specific cut... 28 0.32
AF043442-1|AAC05667.1| 231|Anopheles gambiae putative pupal-spe... 28 0.43
AF043439-1|AAC05664.1| 239|Anopheles gambiae putative pupal-spe... 28 0.43
AF043437-1|AAC05662.1| 239|Anopheles gambiae putative pupal-spe... 28 0.43
AF043436-1|AAC05661.1| 263|Anopheles gambiae putative pupal-spe... 28 0.43
AF043433-3|AAC05658.1| 231|Anopheles gambiae putative pupal-spe... 28 0.43
AF043433-2|AAC05657.1| 239|Anopheles gambiae putative pupal-spe... 28 0.43
AF043433-1|AAC05656.1| 231|Anopheles gambiae putative pupal-spe... 27 0.56
EF427621-5|ABO09853.1| 62|Anopheles gambiae tal-like protein A... 26 1.3
AF043443-1|AAC05668.1| 232|Anopheles gambiae putative pupal-spe... 26 1.7
AF043434-1|AAC05659.1| 232|Anopheles gambiae putative pupal-spe... 26 1.7
>AF043440-1|AAC05665.1| 234|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 234
Score = 29.5 bits (63), Expect = 0.14
Identities = 12/38 (31%), Positives = 15/38 (39%)
Frame = -3
Query: 333 YHHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHH 220
+HH P H+ HH H+ HH P HH
Sbjct: 174 HHHAAPIAHYSAPIAHHAAPIAHYAAPIAHHAAPIAHH 211
Score = 27.1 bits (57), Expect = 0.74
Identities = 12/38 (31%), Positives = 14/38 (36%)
Frame = -3
Query: 330 HHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHHT 217
H+ P HH H+ HH HH P H T
Sbjct: 182 HYSAPIAHHAAPIAHYAAPIAHHAAPIAHHAAPIAHST 219
Score = 24.6 bits (51), Expect = 4.0
Identities = 10/36 (27%), Positives = 13/36 (36%)
Frame = -3
Query: 327 HIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHH 220
H +HH H+ HH H+ P HH
Sbjct: 169 HATVQHHHAAPIAHYSAPIAHHAAPIAHYAAPIAHH 204
>AF043441-1|AAC05666.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 231
Score = 28.3 bits (60), Expect = 0.32
Identities = 12/39 (30%), Positives = 15/39 (38%)
Frame = -3
Query: 333 YHHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHHT 217
+HH P H+ HH H+ HH P H T
Sbjct: 178 HHHAAPIAHYAAPIAHHAAPIAHYAAPIAHHAAPIAHST 216
Score = 25.0 bits (52), Expect = 3.0
Identities = 10/36 (27%), Positives = 13/36 (36%)
Frame = -3
Query: 327 HIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHH 220
H +HH H+ HH H+ P HH
Sbjct: 173 HATVQHHHAAPIAHYAAPIAHHAAPIAHYAAPIAHH 208
>AF043438-1|AAC05663.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 231
Score = 28.3 bits (60), Expect = 0.32
Identities = 12/39 (30%), Positives = 15/39 (38%)
Frame = -3
Query: 333 YHHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHHT 217
+HH P H+ HH H+ HH P H T
Sbjct: 178 HHHAAPIAHYAAPIAHHAAPIAHYAAPIAHHAAPIAHST 216
Score = 25.0 bits (52), Expect = 3.0
Identities = 10/36 (27%), Positives = 13/36 (36%)
Frame = -3
Query: 327 HIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHH 220
H +HH H+ HH H+ P HH
Sbjct: 173 HATVQHHHAAPIAHYAAPIAHHAAPIAHYAAPIAHH 208
>AF043435-1|AAC05660.1| 231|Anopheles gambiae pupal-specific
cuticular protein CP2b protein.
Length = 231
Score = 28.3 bits (60), Expect = 0.32
Identities = 12/39 (30%), Positives = 15/39 (38%)
Frame = -3
Query: 333 YHHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHHT 217
+HH P H+ HH H+ HH P H T
Sbjct: 178 HHHAAPIAHYAAPIAHHAAPIAHYAAPIAHHAAPIAHST 216
Score = 25.0 bits (52), Expect = 3.0
Identities = 10/36 (27%), Positives = 13/36 (36%)
Frame = -3
Query: 327 HIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHH 220
H +HH H+ HH H+ P HH
Sbjct: 173 HATVQHHHAAPIAHYAAPIAHHAAPIAHYAAPIAHH 208
>AF043442-1|AAC05667.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinCP2c protein.
Length = 231
Score = 27.9 bits (59), Expect = 0.43
Identities = 12/39 (30%), Positives = 15/39 (38%)
Frame = -3
Query: 333 YHHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHHT 217
+HH P H+ HH H+ HH P H T
Sbjct: 178 HHHAAPIAHYSAPIAHHAAPIAHYAAPIAHHAAPIAHST 216
Score = 24.6 bits (51), Expect = 4.0
Identities = 10/36 (27%), Positives = 13/36 (36%)
Frame = -3
Query: 327 HIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHH 220
H +HH H+ HH H+ P HH
Sbjct: 173 HATVQHHHAAPIAHYSAPIAHHAAPIAHYAAPIAHH 208
>AF043439-1|AAC05664.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 27.9 bits (59), Expect = 0.43
Identities = 12/39 (30%), Positives = 15/39 (38%)
Frame = -3
Query: 333 YHHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHHT 217
+HH P H+ HH H+ HH P H T
Sbjct: 186 HHHAAPIAHYSAPIAHHAAPIAHYAAPIAHHAAPIAHST 224
Score = 24.6 bits (51), Expect = 4.0
Identities = 10/36 (27%), Positives = 13/36 (36%)
Frame = -3
Query: 327 HIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHH 220
H +HH H+ HH H+ P HH
Sbjct: 181 HATVQHHHAAPIAHYSAPIAHHAAPIAHYAAPIAHH 216
>AF043437-1|AAC05662.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 27.9 bits (59), Expect = 0.43
Identities = 12/39 (30%), Positives = 15/39 (38%)
Frame = -3
Query: 333 YHHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHHT 217
+HH P H+ HH H+ HH P H T
Sbjct: 186 HHHAAPIAHYSAPIAHHAAPIAHYAAPIAHHAAPIAHST 224
Score = 24.6 bits (51), Expect = 4.0
Identities = 10/36 (27%), Positives = 13/36 (36%)
Frame = -3
Query: 327 HIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHH 220
H +HH H+ HH H+ P HH
Sbjct: 181 HATVQHHHAAPIAHYSAPIAHHAAPIAHYAAPIAHH 216
>AF043436-1|AAC05661.1| 263|Anopheles gambiae putative
pupal-specific cuticular proteinCP2c protein.
Length = 263
Score = 27.9 bits (59), Expect = 0.43
Identities = 12/39 (30%), Positives = 15/39 (38%)
Frame = -3
Query: 333 YHHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHHT 217
+HH P H+ HH H+ HH P H T
Sbjct: 210 HHHAAPIAHYSAPIAHHAAPIAHYAAPIAHHAAPIAHST 248
Score = 24.6 bits (51), Expect = 4.0
Identities = 10/36 (27%), Positives = 13/36 (36%)
Frame = -3
Query: 327 HIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHH 220
H +HH H+ HH H+ P HH
Sbjct: 205 HATVQHHHAAPIAHYSAPIAHHAAPIAHYAAPIAHH 240
>AF043433-3|AAC05658.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 231
Score = 27.9 bits (59), Expect = 0.43
Identities = 12/39 (30%), Positives = 15/39 (38%)
Frame = -3
Query: 333 YHHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHHT 217
+HH P H+ HH H+ HH P H T
Sbjct: 178 HHHAAPIAHYSAPIAHHAAPIAHYAAPIAHHAAPIAHST 216
Score = 24.6 bits (51), Expect = 4.0
Identities = 10/36 (27%), Positives = 13/36 (36%)
Frame = -3
Query: 327 HIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHH 220
H +HH H+ HH H+ P HH
Sbjct: 173 HATVQHHHAAPIAHYSAPIAHHAAPIAHYAAPIAHH 208
>AF043433-2|AAC05657.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 239
Score = 27.9 bits (59), Expect = 0.43
Identities = 12/39 (30%), Positives = 15/39 (38%)
Frame = -3
Query: 333 YHHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHHT 217
+HH P H+ HH H+ HH P H T
Sbjct: 186 HHHAAPIAHYSAPIAHHAAPIAHYAAPIAHHAAPIAHST 224
Score = 24.6 bits (51), Expect = 4.0
Identities = 10/36 (27%), Positives = 13/36 (36%)
Frame = -3
Query: 327 HIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHH 220
H +HH H+ HH H+ P HH
Sbjct: 181 HATVQHHHAAPIAHYSAPIAHHAAPIAHYAAPIAHH 216
>AF043433-1|AAC05656.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 231
Score = 27.5 bits (58), Expect = 0.56
Identities = 12/39 (30%), Positives = 15/39 (38%)
Frame = -3
Query: 333 YHHIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHHT 217
+HH P H+ HH H+ HH P H T
Sbjct: 178 HHHAAPIAHYSAPIAHHAAPITHYAAPIAHHAAPIAHST 216
Score = 24.6 bits (51), Expect = 4.0
Identities = 10/36 (27%), Positives = 13/36 (36%)
Frame = -3
Query: 327 HIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHH 220
H +HH H+ HH H+ P HH
Sbjct: 173 HATVQHHHAAPIAHYSAPIAHHAAPITHYAAPIAHH 208
>EF427621-5|ABO09853.1| 62|Anopheles gambiae tal-like protein AA
protein.
Length = 62
Score = 26.2 bits (55), Expect = 1.3
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -3
Query: 318 PDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHH 220
P +HH + +H R+ HH + H ++ CH+
Sbjct: 25 PFHHHHQQQQNHQRMPHHHQQQQQHQVK--CHY 55
Score = 24.6 bits (51), Expect = 4.0
Identities = 11/40 (27%), Positives = 17/40 (42%)
Frame = -3
Query: 366 SGLGCHQIRXGYHHIRPDYHHIRXDCHHIRLDCHHIRLDY 247
SG Q +HH + +H R HH + H ++ Y
Sbjct: 16 SGASSSQRSPFHHHHQQQQNHQRMPHHHQQQQQHQVKCHY 55
>AF043443-1|AAC05668.1| 232|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 232
Score = 25.8 bits (54), Expect = 1.7
Identities = 11/37 (29%), Positives = 13/37 (35%)
Frame = -3
Query: 327 HIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHHT 217
H +HH H+ HH HH P H T
Sbjct: 181 HATVQHHHAAPIAHYAAPIAHHAAPIAHHAAPIAHST 217
>AF043434-1|AAC05659.1| 232|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 232
Score = 25.8 bits (54), Expect = 1.7
Identities = 11/37 (29%), Positives = 13/37 (35%)
Frame = -3
Query: 327 HIRPDYHHIRXDCHHIRLDCHHIRLDYHHIRPDCHHT 217
H +HH H+ HH HH P H T
Sbjct: 181 HATVQHHHAAPIAHYAAPIAHHAAPIAHHAAPIAHST 217
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 436,379
Number of Sequences: 2352
Number of extensions: 5627
Number of successful extensions: 44
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93026475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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