Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_O04
(1458 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 0.43
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 1.5
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 31 2.0
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 31 2.0
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 31 2.0
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 31 2.0
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 26 2.4
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 26 2.5
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 4.7
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 4.7
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 4.7
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 26 6.6
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 26 6.7
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.1 bits (67), Expect = 2.0
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1
Query: 1 PXPPPPPPXXPPP 39
P PPPPPP PPP
Sbjct: 65 PPPPPPPPMCPPP 77
Score = 27.9 bits (59), Expect(2) = 0.43
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +1
Query: 1 PXPPPPPPXXPPP 39
P PPPPPP PP
Sbjct: 29 PCPPPPPPMCAPP 41
Score = 24.2 bits (50), Expect(2) = 0.43
Identities = 9/25 (36%), Positives = 10/25 (40%)
Frame = +1
Query: 13 PPPPXXPPPXXXXXXXXXXAPXXPL 87
PPPP PPP P P+
Sbjct: 57 PPPPMCPPPPPPPPPPMCPPPPPPM 81
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.5 bits (68), Expect = 1.5
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 1 PXPPPPPPXXPPPXXXXXXXXXXAPXXP 84
P PPPPPP PPP P P
Sbjct: 1336 PSPPPPPPPPPPPSDDLTPVPPPPPPPP 1363
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 31.1 bits (67), Expect = 2.0
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1
Query: 1 PXPPPPPPXXPPP 39
P PPPPPP PPP
Sbjct: 355 PAPPPPPPPPPPP 367
Score = 31.1 bits (67), Expect = 2.0
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1
Query: 1 PXPPPPPPXXPPP 39
P PPPPPP PPP
Sbjct: 357 PPPPPPPPPPPPP 369
Score = 31.1 bits (67), Expect = 2.0
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1
Query: 1 PXPPPPPPXXPPP 39
P PPPPPP PPP
Sbjct: 358 PPPPPPPPPPPPP 370
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 31.1 bits (67), Expect = 2.0
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1
Query: 1 PXPPPPPPXXPPP 39
P PPPPPP PPP
Sbjct: 132 PPPPPPPPHYPPP 144
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 31.1 bits (67), Expect = 2.0
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1
Query: 1 PXPPPPPPXXPPP 39
P PPPPPP PPP
Sbjct: 2 PPPPPPPPPPPPP 14
Score = 31.1 bits (67), Expect = 2.0
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1
Query: 1 PXPPPPPPXXPPP 39
P PPPPPP PPP
Sbjct: 3 PPPPPPPPPPPPP 15
Score = 31.1 bits (67), Expect = 2.0
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1
Query: 1 PXPPPPPPXXPPP 39
P PPPPPP PPP
Sbjct: 4 PPPPPPPPPPPPP 16
Score = 31.1 bits (67), Expect = 2.0
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1
Query: 1 PXPPPPPPXXPPP 39
P PPPPPP PPP
Sbjct: 5 PPPPPPPPPPPPP 17
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 31.1 bits (67), Expect = 2.0
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1
Query: 1 PXPPPPPPXXPPP 39
P PPPPPP PPP
Sbjct: 2 PPPPPPPPPPPPP 14
Score = 31.1 bits (67), Expect = 2.0
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1
Query: 1 PXPPPPPPXXPPP 39
P PPPPPP PPP
Sbjct: 3 PPPPPPPPPPPPP 15
Score = 31.1 bits (67), Expect = 2.0
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1
Query: 1 PXPPPPPPXXPPP 39
P PPPPPP PPP
Sbjct: 4 PPPPPPPPPPPPP 16
Score = 31.1 bits (67), Expect = 2.0
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1
Query: 1 PXPPPPPPXXPPP 39
P PPPPPP PPP
Sbjct: 5 PPPPPPPPPPPPP 17
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 26.2 bits (55), Expect(2) = 8.8
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +1
Query: 10 PPPPPXXPPPXXXXXXXXXXAPXXPLXP 93
PPPPP PP AP P P
Sbjct: 609 PPPPPPPPPQSFGMAPISSAAPPPPPPP 636
Score = 25.8 bits (54), Expect(2) = 2.4
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +1
Query: 10 PPPPPXXPPPXXXXXXXXXXAPXXPLXPXG 99
PPPPP PP P P P G
Sbjct: 630 PPPPPPPPPMGLPAVGAGAPPPPPPPPPSG 659
Score = 23.4 bits (48), Expect(2) = 2.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 1 PXPPPPPP 24
P PPPPPP
Sbjct: 609 PPPPPPPP 616
Score = 21.0 bits (42), Expect(2) = 8.8
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +1
Query: 7 PPPPPP 24
PPPPPP
Sbjct: 574 PPPPPP 579
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 26.2 bits (55), Expect(2) = 9.0
Identities = 11/28 (39%), Positives = 11/28 (39%)
Frame = +1
Query: 10 PPPPPXXPPPXXXXXXXXXXAPXXPLXP 93
PPPPP PP AP P P
Sbjct: 435 PPPPPPPPPQSFGMAPISSAAPPPPPPP 462
Score = 25.8 bits (54), Expect(2) = 2.5
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +1
Query: 10 PPPPPXXPPPXXXXXXXXXXAPXXPLXPXG 99
PPPPP PP P P P G
Sbjct: 456 PPPPPPPPPMGLPAVGAGAPPPPPPPPPSG 485
Score = 23.4 bits (48), Expect(2) = 2.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 1 PXPPPPPP 24
P PPPPPP
Sbjct: 436 PPPPPPPP 443
Score = 21.0 bits (42), Expect(2) = 9.0
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +1
Query: 7 PPPPPP 24
PPPPPP
Sbjct: 400 PPPPPP 405
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.9 bits (64), Expect = 4.7
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +1
Query: 1 PXPPPPPPXXPPPXXXXXXXXXXAPXXPLXPXGXF 105
P PPPPP PPP P P G F
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.9 bits (64), Expect = 4.7
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +1
Query: 1 PXPPPPPPXXPPPXXXXXXXXXXAPXXPLXPXGXF 105
P PPPPP PPP P P G F
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.9 bits (64), Expect = 4.7
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +1
Query: 1 PXPPPPPPXXPPPXXXXXXXXXXAPXXPLXPXGXF 105
P PPPPP PPP P P G F
Sbjct: 342 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 376
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 25.8 bits (54), Expect(2) = 6.6
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 7 PPPPPPXXPP 36
PPPPPP PP
Sbjct: 765 PPPPPPPPPP 774
Score = 21.8 bits (44), Expect(2) = 6.6
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 10 PPPPPXXPPPXXXXXXXXXXAP 75
PPPPP PPP AP
Sbjct: 808 PPPPP--PPPPGGLMHVAASAP 827
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 25.8 bits (54), Expect(2) = 6.7
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 7 PPPPPPXXPP 36
PPPPPP PP
Sbjct: 765 PPPPPPPPPP 774
Score = 21.8 bits (44), Expect(2) = 6.7
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 10 PPPPPXXPPPXXXXXXXXXXAP 75
PPPPP PPP AP
Sbjct: 808 PPPPP--PPPPGGLMHVAASAP 827
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,651,697
Number of Sequences: 27780
Number of extensions: 112117
Number of successful extensions: 4448
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2523
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4173077878
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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