Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_O03
         (855 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X56212-1|CAA39669.1| 1613|Caenorhabditis elegans vitellogenin pr...    29   4.2  

>X56212-1|CAA39669.1| 1613|Caenorhabditis elegans vitellogenin
            protein.
          Length = 1613

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 19/90 (21%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
 Frame = +2

Query: 269  EHEAREYMLHLDKA--TGLRKNRASLAEWEYTSNITKENEEXSIQLTWSSRVQEKAAWEE 442
            E  AR  +  L+K   + ++ N+    E+E     T+   E S +  WS+ +Q++  ++ 
Sbjct: 1021 EFTARLTVGQLEKTELSQIKYNKIFEKEFELEQENTESRREYSTR--WSTNIQKEQGYKS 1078

Query: 443  TXMYGWQDFQDFTLRRXFRNIVN*ALRLCQ 532
                  +  +D+T+      + +  +R+CQ
Sbjct: 1079 VISLKLEAPRDYTMNTELTTVCDKQVRMCQ 1108


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,435,628
Number of Sequences: 27780
Number of extensions: 294764
Number of successful extensions: 740
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 740
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)