Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_O02
         (856 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0387 + 2922208-2922704,2922956-2923088,2923487-2923549,292...    31   1.2  
04_04_1354 - 32841778-32841983,32842079-32843093,32843184-328435...    29   4.7  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.3  
03_02_0910 + 12317493-12317960,12319678-12319734,12320592-123206...    28   8.3  

>11_01_0387 +
           2922208-2922704,2922956-2923088,2923487-2923549,
           2923564-2923680,2925040-2925399
          Length = 389

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 8/58 (13%)
 Frame = +1

Query: 532 GSAPPDEHHKNRRSSQRWRXPDXTIKIP-----GXSPLEAPLXR--SP-GSDPCPPYP 681
           G APP  HH+   S    R PD  + +      G S L+ P     SP  SDP PP P
Sbjct: 12  GGAPPRGHHRRAHSETFIRLPDADLLLDPDGEFGFSDLDFPSLSDDSPAASDPTPPPP 69


>04_04_1354 - 32841778-32841983,32842079-32843093,32843184-32843518,
            32843590-32844019,32844155-32844214,32844531-32844651,
            32845321-32846132
          Length = 992

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
 Frame = +1

Query: 631  EAPLXRSPGSDPCPPYPEYLVRP---FXPSGKPWR 726
            + P  R     PCPP+    VRP   F P G PWR
Sbjct: 907  QGPFPRHAPPHPCPPFTPGHVRPPSNFAPPG-PWR 940


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 295 NESAN---ARGEAVCVLGALPLPRSLTRCAR 378
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>03_02_0910 +
           12317493-12317960,12319678-12319734,12320592-12320666,
           12321219-12321299,12321472-12321546,12321818-12321862,
           12321975-12322064,12322153-12322254,12322366-12322420,
           12324966-12325027,12325521-12325555,12325877-12326115,
           12326219-12328035
          Length = 1066

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 18/65 (27%), Positives = 22/65 (33%)
 Frame = +1

Query: 532 GSAPPDEHHKNRRSSQRWRXPDXTIKIPGXSPLEAPLXRSPGSDPCPPYPEYLVRPFXPS 711
           G  PP  HH    SS R+R             +E    R P S  C  Y      P    
Sbjct: 775 GQVPPPPHHHRELSSLRYRRRRRAYSCCHSDQMET--MRRPCSHDCCHYHSCRPPPCHHH 832

Query: 712 GKPWR 726
            +PW+
Sbjct: 833 DRPWK 837


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,961,956
Number of Sequences: 37544
Number of extensions: 409203
Number of successful extensions: 1100
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1098
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)