Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_O02
         (856 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB002337-1|BAA20797.2| 1709|Homo sapiens KIAA0339 protein protein.     32   3.1  
BC035761-1|AAH35761.1| 1033|Homo sapiens SEC24 related gene fami...    31   4.0  
AF130464-1|AAD28756.2| 1032|Homo sapiens sec24D protein protein.       31   4.0  
AC108030-1|AAY40935.1|  570|Homo sapiens unknown protein.              31   4.0  
AB018298-1|BAA34475.2| 1093|Homo sapiens KIAA0755 protein protein.     31   4.0  
AF010404-1|AAC51735.1| 4957|Homo sapiens ALR protein.                  31   7.1  

>AB002337-1|BAA20797.2| 1709|Homo sapiens KIAA0339 protein protein.
          Length = 1709

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
 Frame = +1

Query: 535  SAPPDEHHKNRRSS-QRWRXPDXTIKIPGXSPLEAPLXRSPGSDPCPPYPEYLVRPFXPS 711
            S+  DE  + R ++      P   + +P  +P+E P+       P  P PE    P  P+
Sbjct: 1062 SSSEDEEEEERPAALPSASPPPREVPVPTPAPVEVPVPERVAGSPVTPLPEQEASPARPA 1121

Query: 712  G 714
            G
Sbjct: 1122 G 1122


>BC035761-1|AAH35761.1| 1033|Homo sapiens SEC24 related gene family,
           member D (S. cerevisiae) protein.
          Length = 1033

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +1

Query: 574 SQRWRXPDXTIKIPGXSPLEAPLXRSPG-SDPCPPYPEYLVRP 699
           SQ    P  T+  PG SPL  P+ R  G S P PP  +Y   P
Sbjct: 168 SQVLPPPPTTLNGPGASPLPLPMYRPDGLSGPPPPNAQYQPPP 210


>AF130464-1|AAD28756.2| 1032|Homo sapiens sec24D protein protein.
          Length = 1032

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +1

Query: 574 SQRWRXPDXTIKIPGXSPLEAPLXRSPG-SDPCPPYPEYLVRP 699
           SQ    P  T+  PG SPL  P+ R  G S P PP  +Y   P
Sbjct: 168 SQVLPPPPTTLNGPGASPLPLPMYRPDGLSGPPPPNAQYQPPP 210


>AC108030-1|AAY40935.1|  570|Homo sapiens unknown protein.
          Length = 570

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +1

Query: 574 SQRWRXPDXTIKIPGXSPLEAPLXRSPG-SDPCPPYPEYLVRP 699
           SQ    P  T+  PG SPL  P+ R  G S P PP  +Y   P
Sbjct: 168 SQVLPPPPTTLNGPGASPLPLPMYRPDGLSGPPPPNAQYQPPP 210


>AB018298-1|BAA34475.2| 1093|Homo sapiens KIAA0755 protein protein.
          Length = 1093

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = +1

Query: 574 SQRWRXPDXTIKIPGXSPLEAPLXRSPG-SDPCPPYPEYLVRP 699
           SQ    P  T+  PG SPL  P+ R  G S P PP  +Y   P
Sbjct: 229 SQVLPPPPTTLNGPGASPLPLPMYRPDGLSGPPPPNAQYQPPP 271


>AF010404-1|AAC51735.1| 4957|Homo sapiens ALR protein.
          Length = 4957

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +1

Query: 613 PGXSPLEA-PLXRSPGSDPCPPYPEYLVRPFXPSGKP 720
           P  SPL   P    PG  P  P PE L  P  PSG+P
Sbjct: 309 PSLSPLLGEPALSEPGEPPLSPLPEEL--PLSPSGEP 343


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,268,163
Number of Sequences: 237096
Number of extensions: 2230758
Number of successful extensions: 7026
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7018
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)