Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_O02
         (856 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089647-1|AAL90385.1|  546|Drosophila melanogaster RH04813p pro...    30   4.7  
AE014296-777|AAF47847.2|  511|Drosophila melanogaster CG1299-PA ...    30   4.7  
U31961-5|AAA84404.1|  424|Drosophila melanogaster protein ( Dros...    29   8.1  
AE014298-2404|AAF48609.1|  511|Drosophila melanogaster CG9968-PB...    29   8.1  
AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-P...    29   8.1  

>AY089647-1|AAL90385.1|  546|Drosophila melanogaster RH04813p
           protein.
          Length = 546

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 623 PPWKLPSCALLVPTPARLTRNTWSAPSPLXGNRGA 727
           PP ++P    L+PTP   T  T + P+P+     A
Sbjct: 120 PPPEVPDNPFLIPTPRTTTTTTTTTPAPIPDTSAA 154


>AE014296-777|AAF47847.2|  511|Drosophila melanogaster CG1299-PA
           protein.
          Length = 511

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 623 PPWKLPSCALLVPTPARLTRNTWSAPSPLXGNRGA 727
           PP ++P    L+PTP   T  T + P+P+     A
Sbjct: 120 PPPEVPDNPFLIPTPRTTTTTTTTTPAPIPDTSAA 154


>U31961-5|AAA84404.1|  424|Drosophila melanogaster protein (
           Drosophila melanogasterbithorax complex (BX-C), complete
           sequence. ).
          Length = 424

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +1

Query: 298 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 393
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 340 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 371


>AE014298-2404|AAF48609.1|  511|Drosophila melanogaster CG9968-PB,
           isoform B protein.
          Length = 511

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 14/49 (28%), Positives = 21/49 (42%)
 Frame = +1

Query: 541 PPDEHHKNRRSSQRWRXPDXTIKIPGXSPLEAPLXRSPGSDPCPPYPEY 687
           PP + H + + S +   P    + PG +P   P   +P     P YP Y
Sbjct: 42  PPSQPHPHSQPSSQMH-PQQHQQYPGGAPAPYPPMSAPYPSAAPSYPPY 89


>AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-PA
           protein.
          Length = 417

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +1

Query: 298 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 393
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 333 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 364


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,379,382
Number of Sequences: 53049
Number of extensions: 643229
Number of successful extensions: 1605
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1605
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4106450400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)