Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_N22
         (876 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82287-6|CAB05318.1|  312|Caenorhabditis elegans Hypothetical pr...    73   4e-13
Z80223-9|CAB02322.1|  312|Caenorhabditis elegans Hypothetical pr...    73   4e-13
Z82287-5|CAB05315.1|  328|Caenorhabditis elegans Hypothetical pr...    72   6e-13
AL110479-7|CAB54355.1|  288|Caenorhabditis elegans Hypothetical ...    37   0.022
Z70311-5|CAA94378.2|  527|Caenorhabditis elegans Hypothetical pr...    29   4.4  

>Z82287-6|CAB05318.1|  312|Caenorhabditis elegans Hypothetical
           protein ZK550.6 protein.
          Length = 312

 Score = 72.5 bits (170), Expect = 4e-13
 Identities = 47/164 (28%), Positives = 86/164 (52%), Gaps = 8/164 (4%)
 Frame = +2

Query: 104 LTEEQKKFYEENGYIVLKNVLSEEDLCSITIEYNNLFNRKNQEKMESSWVGSDHNDRKHD 283
           L+ EQ++FYE+NGY++++N + + +L      + ++  +K  +  E+  V  D +  K +
Sbjct: 16  LSAEQRRFYEKNGYLLIRNCVPQYELNRFRQRFQDICEKK-VKAPENMTVMKDISIAKSE 74

Query: 284 KNFTVKGIHNLQ--FHHAVFSKFIFNDNLLDALEDVM-NTK-NIIFHHTKAHYKPPEKG- 448
                K I  +Q      V  ++     ++D ++D++ N K N++  HT    KPP+ G 
Sbjct: 75  FKDGEKAITKIQDFADDPVLFEYCKYPGVVDVVKDLIGNPKSNLMAMHTMLINKPPDNGK 134

Query: 449 --AAYPMHQDYHYFPYE-KDSMVASFLHLDAADPKNGCLYVYPG 571
             + +PMHQD  YFP+   D +  ++  ++     NGCL V PG
Sbjct: 135 LTSRHPMHQDLQYFPFRPADFICCAWTAMEKITRANGCLVVVPG 178


>Z80223-9|CAB02322.1|  312|Caenorhabditis elegans Hypothetical
           protein ZK550.6 protein.
          Length = 312

 Score = 72.5 bits (170), Expect = 4e-13
 Identities = 47/164 (28%), Positives = 86/164 (52%), Gaps = 8/164 (4%)
 Frame = +2

Query: 104 LTEEQKKFYEENGYIVLKNVLSEEDLCSITIEYNNLFNRKNQEKMESSWVGSDHNDRKHD 283
           L+ EQ++FYE+NGY++++N + + +L      + ++  +K  +  E+  V  D +  K +
Sbjct: 16  LSAEQRRFYEKNGYLLIRNCVPQYELNRFRQRFQDICEKK-VKAPENMTVMKDISIAKSE 74

Query: 284 KNFTVKGIHNLQ--FHHAVFSKFIFNDNLLDALEDVM-NTK-NIIFHHTKAHYKPPEKG- 448
                K I  +Q      V  ++     ++D ++D++ N K N++  HT    KPP+ G 
Sbjct: 75  FKDGEKAITKIQDFADDPVLFEYCKYPGVVDVVKDLIGNPKSNLMAMHTMLINKPPDNGK 134

Query: 449 --AAYPMHQDYHYFPYE-KDSMVASFLHLDAADPKNGCLYVYPG 571
             + +PMHQD  YFP+   D +  ++  ++     NGCL V PG
Sbjct: 135 LTSRHPMHQDLQYFPFRPADFICCAWTAMEKITRANGCLVVVPG 178


>Z82287-5|CAB05315.1|  328|Caenorhabditis elegans Hypothetical
           protein ZK550.5 protein.
          Length = 328

 Score = 71.7 bits (168), Expect = 6e-13
 Identities = 47/170 (27%), Positives = 89/170 (52%), Gaps = 9/170 (5%)
 Frame = +2

Query: 104 LTEEQKKFYEENGYIVLKNVLSEEDLCSITIEYNNLFNRKNQEKMESSWVGSDHNDRKH- 280
           L+ EQK+FY++NG+++++  +++++L     ++N +  RK  +   +  V  D +  K  
Sbjct: 32  LSVEQKQFYQKNGFLLVRGCVAKDELKKYENQFNAICERK-VKPPPNMLVMKDVSIAKKV 90

Query: 281 --DKNFTVKGIHNLQFHHAVFSKFIFNDNLLDALEDVMNTKN--IIFHHTKAHYKPPEKG 448
             D   T+  + +      +FS +  N  + D + D++ + +  I   HT    KPP+ G
Sbjct: 91  TPDSIDTITKVQDFTDEPVLFS-YCENKKVTDVVRDLIGSPDTRITAMHTMLINKPPDTG 149

Query: 449 A---AYPMHQDYHYFPYEKDSM-VASFLHLDAADPKNGCLYVYPGFTQTG 586
           A    +PMHQD  YFP+  + + V ++  ++  + +NGCL V PG    G
Sbjct: 150 ALTSRHPMHQDLIYFPWRPEELTVCAWTAMEKINKQNGCLQVVPGTQARG 199


>AL110479-7|CAB54355.1|  288|Caenorhabditis elegans Hypothetical
           protein Y105C5B.9 protein.
          Length = 288

 Score = 36.7 bits (81), Expect = 0.022
 Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
 Frame = +2

Query: 308 HNLQFHHAVFSKFIFNDNLLDALEDVMNTKNIIFHHTKAHYKPPEKGAAYPMHQDYHYFP 487
           H L F    F K  FN  + +  +++   +  +       +K P+ G A   H D  +  
Sbjct: 98  HGLHFLDPTFEKMTFNSKIQNIFKEIGYQEPGVVQSMYI-FKQPKIGGAVTDHVDSTFLR 156

Query: 488 YEK-DSMVASFLHLDAADPKNGCLYVYPG 571
            +  D +   ++ +D A  +NGCL   PG
Sbjct: 157 VDPIDHLTGVWIAIDEASVENGCLSFIPG 185


>Z70311-5|CAA94378.2|  527|Caenorhabditis elegans Hypothetical
           protein T25B9.7 protein.
          Length = 527

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
 Frame = -3

Query: 415 VMENNVLSVHYILESVQKIVVEDKLGEHGMVELKVVD--AFHSKILVMFPVVMITADPGA 242
           ++E + L+V  ++ ++QK++   K GE+  +  K+++     S+ L +  V     +PG 
Sbjct: 406 IVERHQLTVENLVNALQKLLYNPKYGENAKMISKMMNEKPEQSERLFVDWVEYAAKNPG- 464

Query: 241 LHLFLVLPVEEIVIFY 194
           LH  + LP  E+  F+
Sbjct: 465 LHKIMNLPGAELTPFW 480


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,405,204
Number of Sequences: 27780
Number of extensions: 450186
Number of successful extensions: 1224
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1215
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)