Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_N21
         (911 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336...    29   6.8  
07_01_0479 + 3606663-3607448                                           29   6.8  
11_04_0009 - 12132781-12133272                                         28   9.0  

>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
            33643-34147,34250-34358,34436-34548,34619-34806,
            35481-36129,36169-36691,36760-36911,37042-37141,
            37301-37416
          Length = 1530

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 16/51 (31%), Positives = 16/51 (31%)
 Frame = +2

Query: 521  PXXPXPXXXPPXXPXXXXXYPRPPDSPFXXGLXXXPXMIXXP*WSLDHPPP 673
            P  P P   PP  P      P PP  P   G    P     P      PPP
Sbjct: 1161 PPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQPAPPPLPIQPPPIPPP 1211


>07_01_0479 + 3606663-3607448
          Length = 261

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 12/31 (38%), Positives = 12/31 (38%)
 Frame = +2

Query: 521 PXXPXPXXXPPXXPXXXXXYPRPPDSPFXXG 613
           P  P P   PP  P      P PP  PF  G
Sbjct: 181 PQMPIPFQRPPGVPPAFPGGPPPPPGPFMRG 211


>11_04_0009 - 12132781-12133272
          Length = 163

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -1

Query: 218 RSSTWAREQRWSCSKPAPERRRRIGSLR 135
           R   W RE+R S  +  P +RRR+G  R
Sbjct: 108 RGEAWRRERRDSKIESRPSQRRRVGGRR 135


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,285,346
Number of Sequences: 37544
Number of extensions: 357589
Number of successful extensions: 2242
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1934
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)