Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_N19
(791 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 40 0.002
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 40 0.002
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 38 0.011
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 38 0.011
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 38 0.011
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 36 0.033
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 36 0.044
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 35 0.058
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 35 0.058
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 35 0.058
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 33 0.31
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 33 0.31
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 33 0.31
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 33 0.31
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.31
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.31
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.31
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 0.71
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 31 0.94
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 30 1.7
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 30 2.2
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 30 2.2
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 3.8
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z47357-9|CAI46580.1| 563|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z47357-8|CAA87425.3| 601|Caenorhabditis elegans Hypothetical pr... 28 6.7
U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical pr... 28 6.7
AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical ... 28 6.7
Z93389-9|CAB07670.2| 391|Caenorhabditis elegans Hypothetical pr... 28 8.8
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 28 8.8
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 28 8.8
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 8.8
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = +3
Query: 702 PPXXGGXPXPPPXKKXXXGGXPPPPP 779
PP GG P PPP GG PPPPP
Sbjct: 327 PPGMGGMPPPPPPGMRYPGGMPPPPP 352
Score = 32.7 bits (71), Expect = 0.31
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 3/29 (10%)
Frame = +3
Query: 702 PPXXGGXPXPPPXKK---XXXGGXPPPPP 779
PP G P PPP + GG PPPPP
Sbjct: 310 PPGMPGMPPPPPPSRFGPPGMGGMPPPPP 338
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 702 PPXXGGXPXPPPXKKXXXGGXPPPPP 779
PP G P PPP PPPPP
Sbjct: 278 PPTPGMTPRPPPPPSSGMWPPPPPPP 303
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 8/38 (21%)
Frame = +3
Query: 690 GGXXPPXX------GGXPXPPPXK--KXXXGGXPPPPP 779
GG PP GG P PPP + G PPPPP
Sbjct: 331 GGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPP 368
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = +3
Query: 702 PPXXGGXPXPPPXKKXXXGGXPPPPP 779
PP GG P PPP GG PPPPP
Sbjct: 337 PPGMGGMPPPPPPGMRYPGGMPPPPP 362
Score = 32.7 bits (71), Expect = 0.31
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 3/29 (10%)
Frame = +3
Query: 702 PPXXGGXPXPPPXKK---XXXGGXPPPPP 779
PP G P PPP + GG PPPPP
Sbjct: 320 PPGMPGMPPPPPPSRFGPPGMGGMPPPPP 348
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 702 PPXXGGXPXPPPXKKXXXGGXPPPPP 779
PP G P PPP PPPPP
Sbjct: 288 PPTPGMTPRPPPPPSSGMWPPPPPPP 313
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 8/38 (21%)
Frame = +3
Query: 690 GGXXPPXX------GGXPXPPPXK--KXXXGGXPPPPP 779
GG PP GG P PPP + G PPPPP
Sbjct: 341 GGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPP 378
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/31 (51%), Positives = 16/31 (51%)
Frame = +3
Query: 687 GGGXXPPXXGGXPXPPPXKKXXXGGXPPPPP 779
G PP GG P PPP GG PPPPP
Sbjct: 702 GSSALPPITGGPP-PPPGLPPITGGPPPPPP 731
Score = 37.5 bits (83), Expect = 0.011
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = +3
Query: 693 GXXPPXXGGXPXPPPXK--KXXXGGXPPPPPXXXG 791
G PP GG P PPP GG PPPPP G
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/29 (55%), Positives = 16/29 (55%)
Frame = +3
Query: 693 GXXPPXXGGXPXPPPXKKXXXGGXPPPPP 779
G PP GG P PPP GG PPPPP
Sbjct: 749 GGLPPISGGPPPPPP----PPGGCPPPPP 773
Score = 35.1 bits (77), Expect = 0.058
Identities = 15/28 (53%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = +3
Query: 702 PPXXGGXPXPPPXKKXXX--GGXPPPPP 779
PP GG P PPP GG PPPPP
Sbjct: 762 PPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = +1
Query: 688 GGGXXPPXXGGXPXPPPKKKXXXGGXPPPP 777
G PP GG P PPP GG PPPP
Sbjct: 702 GSSALPPITGG-PPPPPGLPPITGGPPPPP 730
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = +1
Query: 694 GXXPPXXGGXPXPPPKKKXXXGGXPPPP 777
G PP GG P PPP GG PPPP
Sbjct: 749 GGLPPISGGPPPPPP----PPGGCPPPP 772
Score = 33.1 bits (72), Expect = 0.23
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = +3
Query: 702 PPXXGGXPXPPPXKKXXX-GGXPPPPPXXXG 791
PP GG P PPP G PPPPP G
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGG 750
Score = 31.5 bits (68), Expect = 0.71
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 695 GXXPPXGGXXXPPPXKKXPXXGGAPPPP 778
G P GG PPP P G PPPP
Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGGPPPP 745
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/31 (51%), Positives = 16/31 (51%)
Frame = +3
Query: 687 GGGXXPPXXGGXPXPPPXKKXXXGGXPPPPP 779
G PP GG P PPP GG PPPPP
Sbjct: 702 GSSALPPITGGPP-PPPGLPPITGGPPPPPP 731
Score = 37.5 bits (83), Expect = 0.011
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = +3
Query: 693 GXXPPXXGGXPXPPPXK--KXXXGGXPPPPPXXXG 791
G PP GG P PPP GG PPPPP G
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/29 (55%), Positives = 16/29 (55%)
Frame = +3
Query: 693 GXXPPXXGGXPXPPPXKKXXXGGXPPPPP 779
G PP GG P PPP GG PPPPP
Sbjct: 749 GGLPPISGGPPPPPP----PPGGCPPPPP 773
Score = 35.1 bits (77), Expect = 0.058
Identities = 15/28 (53%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = +3
Query: 702 PPXXGGXPXPPPXKKXXX--GGXPPPPP 779
PP GG P PPP GG PPPPP
Sbjct: 762 PPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = +1
Query: 688 GGGXXPPXXGGXPXPPPKKKXXXGGXPPPP 777
G PP GG P PPP GG PPPP
Sbjct: 702 GSSALPPITGG-PPPPPGLPPITGGPPPPP 730
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = +1
Query: 694 GXXPPXXGGXPXPPPKKKXXXGGXPPPP 777
G PP GG P PPP GG PPPP
Sbjct: 749 GGLPPISGGPPPPPP----PPGGCPPPP 772
Score = 33.1 bits (72), Expect = 0.23
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = +3
Query: 702 PPXXGGXPXPPPXKKXXX-GGXPPPPPXXXG 791
PP GG P PPP G PPPPP G
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGG 750
Score = 31.5 bits (68), Expect = 0.71
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 695 GXXPPXGGXXXPPPXKKXPXXGGAPPPP 778
G P GG PPP P G PPPP
Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGGPPPP 745
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/31 (51%), Positives = 16/31 (51%)
Frame = +3
Query: 687 GGGXXPPXXGGXPXPPPXKKXXXGGXPPPPP 779
G PP GG P PPP GG PPPPP
Sbjct: 285 GSSALPPITGGPP-PPPGLPPITGGPPPPPP 314
Score = 37.5 bits (83), Expect = 0.011
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = +3
Query: 693 GXXPPXXGGXPXPPPXK--KXXXGGXPPPPPXXXG 791
G PP GG P PPP GG PPPPP G
Sbjct: 316 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/29 (55%), Positives = 16/29 (55%)
Frame = +3
Query: 693 GXXPPXXGGXPXPPPXKKXXXGGXPPPPP 779
G PP GG P PPP GG PPPPP
Sbjct: 332 GGLPPISGGPPPPPP----PPGGCPPPPP 356
Score = 35.1 bits (77), Expect = 0.058
Identities = 15/28 (53%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = +3
Query: 702 PPXXGGXPXPPPXKKXXX--GGXPPPPP 779
PP GG P PPP GG PPPPP
Sbjct: 345 PPPPGGCPPPPPPPPPGGFKGGPPPPPP 372
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = +1
Query: 688 GGGXXPPXXGGXPXPPPKKKXXXGGXPPPP 777
G PP GG P PPP GG PPPP
Sbjct: 285 GSSALPPITGG-PPPPPGLPPITGGPPPPP 313
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/28 (53%), Positives = 15/28 (53%)
Frame = +1
Query: 694 GXXPPXXGGXPXPPPKKKXXXGGXPPPP 777
G PP GG P PPP GG PPPP
Sbjct: 332 GGLPPISGGPPPPPP----PPGGCPPPP 355
Score = 33.1 bits (72), Expect = 0.23
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = +3
Query: 702 PPXXGGXPXPPPXKKXXX-GGXPPPPPXXXG 791
PP GG P PPP G PPPPP G
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGG 333
Score = 31.5 bits (68), Expect = 0.71
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 695 GXXPPXGGXXXPPPXKKXPXXGGAPPPP 778
G P GG PPP P G PPPP
Sbjct: 301 GLPPITGGPPPPPPPGGLPPITGGPPPP 328
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 35.9 bits (79), Expect = 0.033
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +3
Query: 702 PPXXGGXPXPPPXKKXXXGGXPPPPPXXXG 791
P G P PPP GG PPPPP G
Sbjct: 569 PQNLSGAPPPPPPPPPMLGGPPPPPPPPGG 598
Score = 29.5 bits (63), Expect = 2.9
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 723 PXPPPXKKXXXGGXPPPPP 779
P PPP + G PPPPP
Sbjct: 563 PPPPPLPQNLSGAPPPPPP 581
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 723 PXPPPXKKXXXGGXPPPPP 779
P PPP G PPPPP
Sbjct: 562 PPPPPPLPQNLSGAPPPPP 580
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 35.5 bits (78), Expect = 0.044
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -2
Query: 775 GGGGXPPXXXFFXGGGXGXPPXXGGXXPPP 686
G GG PP F GG PP GG PPP
Sbjct: 79 GPGGIPPPPPMFAGGIPPPPPMMGGIPPPP 108
Score = 33.1 bits (72), Expect = 0.23
Identities = 17/33 (51%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Frame = +3
Query: 690 GGXXPPXX---GGXPXPPPXKKXXXGGXPPPPP 779
GG PP GG P PPP GG PPPPP
Sbjct: 81 GGIPPPPPMFAGGIPPPPPMM----GGIPPPPP 109
Score = 32.3 bits (70), Expect = 0.41
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +3
Query: 693 GXXPPXXGGXPXPPPXKKXXXGGXPPPPPXXXG 791
G PP G PPP GG PPPPP G
Sbjct: 72 GFIPPPPGPGGIPPP-PPMFAGGIPPPPPMMGG 103
Score = 31.1 bits (67), Expect = 0.94
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +3
Query: 702 PPXXGGXPXPPPXKKXXXGGXPPPPPXXXG 791
PP GG P PPP PPPPP G
Sbjct: 98 PPMMGGIPPPPPM---FGAPPPPPPPSGLG 124
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
Frame = +1
Query: 691 GGXXPPXX---GGXPXPPPKKKXXXGGXPPPP 777
GG PP GG P PPP GG PPPP
Sbjct: 81 GGIPPPPPMFAGGIPPPPPMM----GGIPPPP 108
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 687 GGGXXPPXXGGXPXPPPXKKXXXGGXPPPPP 779
GG PP G PPP G PPPPP
Sbjct: 92 GGIPPPPPMMGGIPPPP---PMFGAPPPPPP 119
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 35.1 bits (77), Expect = 0.058
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +3
Query: 690 GGXXPPXXGGXPXPPPXKKXXXGGXPPPPP 779
GG P G P PPP G PPPPP
Sbjct: 223 GGIAPVNAHGAPPPPPLPPVGAGAPPPPPP 252
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 35.1 bits (77), Expect = 0.058
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +3
Query: 690 GGXXPPXXGGXPXPPPXKKXXXGGXPPPPP 779
GG P G P PPP G PPPPP
Sbjct: 209 GGIAPVNAHGAPPPPPLPPVGAGAPPPPPP 238
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 35.1 bits (77), Expect = 0.058
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +3
Query: 690 GGXXPPXXGGXPXPPPXKKXXXGGXPPPPP 779
GG P G P PPP G PPPPP
Sbjct: 209 GGIAPVNAHGAPPPPPLPPVGAGAPPPPPP 238
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 32.7 bits (71), Expect = 0.31
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 702 PPXXGGXPXPPPXKKXXXGGXPPPPP 779
PP P PPP G PPPPP
Sbjct: 787 PPSTSSVPPPPPPLPPISSGAPPPPP 812
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 723 PXPPPXKKXXXGGXPPPPPXXXG 791
P PPP G PPPPP G
Sbjct: 795 PPPPPLPPISSGAPPPPPPPPPG 817
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 32.7 bits (71), Expect = 0.31
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 702 PPXXGGXPXPPPXKKXXXGGXPPPPP 779
PP P PPP G PPPPP
Sbjct: 787 PPSTSSVPPPPPPLPPISSGAPPPPP 812
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 723 PXPPPXKKXXXGGXPPPPPXXXG 791
P PPP G PPPPP G
Sbjct: 795 PPPPPLPPISSGAPPPPPPPPPG 817
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 32.7 bits (71), Expect = 0.31
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 703 PPXXGGXPXPPPKKKXXXGGXPPP 774
PP G P PPP+ + GG PPP
Sbjct: 673 PPGGGQGPPPPPQGQQYYGGPPPP 696
Score = 31.9 bits (69), Expect = 0.54
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 702 PPXXGGXPXPPPXKKXXXGGXPPP 773
PP G P PPP + GG PPP
Sbjct: 673 PPGGGQGPPPPPQGQQYYGGPPPP 696
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 707 PXGGXXXPPPXKKXPXXGGAPPPP 778
P GG PPP + G PPPP
Sbjct: 673 PPGGGQGPPPPPQGQQYYGGPPPP 696
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 32.7 bits (71), Expect = 0.31
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 703 PPXXGGXPXPPPKKKXXXGGXPPP 774
PP G P PPP+ + GG PPP
Sbjct: 673 PPGGGQGPPPPPQGQQYYGGPPPP 696
Score = 31.9 bits (69), Expect = 0.54
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 702 PPXXGGXPXPPPXKKXXXGGXPPP 773
PP G P PPP + GG PPP
Sbjct: 673 PPGGGQGPPPPPQGQQYYGGPPPP 696
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 707 PXGGXXXPPPXKKXPXXGGAPPPP 778
P GG PPP + G PPPP
Sbjct: 673 PPGGGQGPPPPPQGQQYYGGPPPP 696
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.7 bits (71), Expect = 0.31
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +3
Query: 687 GGGXXPPXXGGXPXPPPXKKXXXGGXPPPP 776
GG PP G P PPP + G PPP
Sbjct: 286 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 315
Score = 32.7 bits (71), Expect = 0.31
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +1
Query: 688 GGGXXPPXXGGXPXPPPKKKXXXGGXPPPP 777
GG PP G P PPP + G PPP
Sbjct: 286 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 315
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = +2
Query: 704 PPXGGXXXPPPXKKXP--XXGGAPPPP 778
PP G PPP K P G+PPPP
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPP 258
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 691 GGXXPPXXGGXPXPPPKKKXXXGGXPPP 774
GG PP G P PPP++K PP
Sbjct: 318 GGSPPPAGTGSPPPPPRQKRQAPERSPP 345
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/33 (39%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Frame = +2
Query: 686 GGGGXXPPXGGXXXPPP--XKKXPXXGGAPPPP 778
G G PP PPP P G+PPPP
Sbjct: 251 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 283
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +3
Query: 693 GXXPPXXGGXPXPPPXKKXXXGGXPPPPPXXXG 791
G PP G PPP G PPPPP G
Sbjct: 278 GSPPPPPAGGSPPPP-----RAGSPPPPPPPRG 305
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +3
Query: 690 GGXXPPXXGGXPXPPPXKKXXXGGXPPP 773
GG PP G P PPP +K PP
Sbjct: 318 GGSPPPAGTGSPPPPPRQKRQAPERSPP 345
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 2/31 (6%)
Frame = +3
Query: 690 GGXXPPXXGGXPXPPPXK--KXXXGGXPPPP 776
G PP G P PP GG PPPP
Sbjct: 262 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 2/36 (5%)
Frame = +3
Query: 690 GGXXPPXXGGXPXPPPXK--KXXXGGXPPPPPXXXG 791
G P G P PPP K G PPPP G
Sbjct: 227 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAG 262
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.7 bits (71), Expect = 0.31
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +3
Query: 687 GGGXXPPXXGGXPXPPPXKKXXXGGXPPPP 776
GG PP G P PPP + G PPP
Sbjct: 307 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 336
Score = 32.7 bits (71), Expect = 0.31
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +1
Query: 688 GGGXXPPXXGGXPXPPPKKKXXXGGXPPPP 777
GG PP G P PPP + G PPP
Sbjct: 307 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 336
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = +2
Query: 704 PPXGGXXXPPPXKKXP--XXGGAPPPP 778
PP G PPP K P G+PPPP
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPP 279
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 691 GGXXPPXXGGXPXPPPKKKXXXGGXPPP 774
GG PP G P PPP++K PP
Sbjct: 339 GGSPPPAGTGSPPPPPRQKRQAPERSPP 366
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/33 (39%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Frame = +2
Query: 686 GGGGXXPPXGGXXXPPP--XKKXPXXGGAPPPP 778
G G PP PPP P G+PPPP
Sbjct: 272 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 304
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +3
Query: 693 GXXPPXXGGXPXPPPXKKXXXGGXPPPPPXXXG 791
G PP G PPP G PPPPP G
Sbjct: 299 GSPPPPPAGGSPPPP-----RAGSPPPPPPPRG 326
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +3
Query: 690 GGXXPPXXGGXPXPPPXKKXXXGGXPPP 773
GG PP G P PPP +K PP
Sbjct: 339 GGSPPPAGTGSPPPPPRQKRQAPERSPP 366
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 2/31 (6%)
Frame = +3
Query: 690 GGXXPPXXGGXPXPPPXK--KXXXGGXPPPP 776
G PP G P PP GG PPPP
Sbjct: 283 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 2/36 (5%)
Frame = +3
Query: 690 GGXXPPXXGGXPXPPPXK--KXXXGGXPPPPPXXXG 791
G P G P PPP K G PPPP G
Sbjct: 248 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAG 283
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.7 bits (71), Expect = 0.31
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +3
Query: 687 GGGXXPPXXGGXPXPPPXKKXXXGGXPPPP 776
GG PP G P PPP + G PPP
Sbjct: 292 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 321
Score = 32.7 bits (71), Expect = 0.31
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +1
Query: 688 GGGXXPPXXGGXPXPPPKKKXXXGGXPPPP 777
GG PP G P PPP + G PPP
Sbjct: 292 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 321
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = +2
Query: 704 PPXGGXXXPPPXKKXP--XXGGAPPPP 778
PP G PPP K P G+PPPP
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPP 264
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 691 GGXXPPXXGGXPXPPPKKKXXXGGXPPP 774
GG PP G P PPP++K PP
Sbjct: 324 GGSPPPAGTGSPPPPPRQKRQAPERSPP 351
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/33 (39%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Frame = +2
Query: 686 GGGGXXPPXGGXXXPPP--XKKXPXXGGAPPPP 778
G G PP PPP P G+PPPP
Sbjct: 257 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 289
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +3
Query: 693 GXXPPXXGGXPXPPPXKKXXXGGXPPPPPXXXG 791
G PP G PPP G PPPPP G
Sbjct: 284 GSPPPPPAGGSPPPP-----RAGSPPPPPPPRG 311
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +3
Query: 690 GGXXPPXXGGXPXPPPXKKXXXGGXPPP 773
GG PP G P PPP +K PP
Sbjct: 324 GGSPPPAGTGSPPPPPRQKRQAPERSPP 351
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 2/31 (6%)
Frame = +3
Query: 690 GGXXPPXXGGXPXPPPXK--KXXXGGXPPPP 776
G PP G P PP GG PPPP
Sbjct: 268 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 2/36 (5%)
Frame = +3
Query: 690 GGXXPPXXGGXPXPPPXK--KXXXGGXPPPPPXXXG 791
G P G P PPP K G PPPP G
Sbjct: 233 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAG 268
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 31.5 bits (68), Expect = 0.71
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3
Query: 723 PXPPPXKKXXXGGXPPPPP 779
P PPP +K GG PPPP
Sbjct: 123 PPPPPPRKSRAGGSSPPPP 141
Score = 31.5 bits (68), Expect = 0.71
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 723 PXPPPXKKXXXGGXPPPPP 779
P PPP K G PPPPP
Sbjct: 124 PPPPPRKSRAGGSSPPPPP 142
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 31.1 bits (67), Expect = 0.94
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +2
Query: 686 GGGGXXPPXGGXXXPPPXKKXPXXGGAPPPP 778
GGGG P PPP P G APPPP
Sbjct: 27 GGGGGCAPAAPACAPPP---PPMCGCAPPPP 54
Score = 31.1 bits (67), Expect = 0.94
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +3
Query: 687 GGGXXPPXXGGXPXPPPXKKXXXGGXPPPPPXXXG 791
GGG P P PPP PPPPP G
Sbjct: 29 GGGCAPAAPACAPPPPPMCGCAPPPPPPPPPPMCG 63
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 723 PXPPPXKKXXXGGXPPPPP 779
P PPP GG PPPPP
Sbjct: 538 PPPPPPVGMANGGPPPPPP 556
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 693 GXXPPXXGGXPXPPPXKKXXXGGXPPPPP 779
G P G PPP G PPPPP
Sbjct: 527 GMAPLSTGAPTPPPPPPVGMANGGPPPPP 555
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 686 GGGGXXPPXGGXXXPPPXKKXPXXGGAPPPP 778
GG G P GG PPP + P G P P
Sbjct: 187 GGQGGPPGHGGMGGPPPGQGGPGGPGGPGGP 217
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 4/39 (10%)
Frame = -2
Query: 790 PXXXGGGGGXPPXXXFFXG----GGXGXPPXXGGXXPPP 686
P GG G PP G GG G PP GG PP
Sbjct: 164 PRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPP 202
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -2
Query: 790 PXXXGGGGGXPPXXXFFXGGGXGXPPXXGGXXPPP 686
P GGGG P GG G PP GG PP
Sbjct: 154 PPPLMGGGGDPRGPP----GGMGGPPGHGGMGGPP 184
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 686 GGGGXXPPXGGXXXPPPXKKXPXXGGAPPPP 778
GG G P GG PPP + P G P P
Sbjct: 467 GGQGGPPGHGGMGGPPPGQGGPGGPGGPGGP 497
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 4/39 (10%)
Frame = -2
Query: 790 PXXXGGGGGXPPXXXFFXG----GGXGXPPXXGGXXPPP 686
P GG G PP G GG G PP GG PP
Sbjct: 444 PRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPP 482
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -2
Query: 790 PXXXGGGGGXPPXXXFFXGGGXGXPPXXGGXXPPP 686
P GGGG P GG G PP GG PP
Sbjct: 434 PPPLMGGGGDPRGPP----GGMGGPPGHGGMGGPP 464
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/31 (51%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +2
Query: 686 GGGGXXPPXG-GXXXPPPXKKXPXXGGAPPP 775
GG G PP G G PPP P GAPPP
Sbjct: 431 GGFGPPPPGGPGAYGPPPTGFPPV--GAPPP 459
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 4/38 (10%)
Frame = +3
Query: 690 GGXXPPXXGGXPXP----PPXKKXXXGGXPPPPPXXXG 791
GG PP GG P PP + GG PPPP G
Sbjct: 407 GGYGPPPPGGPGAPGSYGPP--QGGPGGFGPPPPGGPG 442
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 25.0 bits (52), Expect(2) = 5.6
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 686 GGGGXXPPXGGXXXPPPXKKXPXXGG 763
GG G P GG PP P GG
Sbjct: 501 GGFGSGSPFGGAAPSPPSGPDPDFGG 526
Score = 21.8 bits (44), Expect(2) = 5.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 758 GGAPPPP 778
GGAPPPP
Sbjct: 563 GGAPPPP 569
>Z47357-9|CAI46580.1| 563|Caenorhabditis elegans Hypothetical
protein ZK1128.6b protein.
Length = 563
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 284 SHYSKYFPSSINMQVLLQ 337
SHY KYF +I M +LLQ
Sbjct: 512 SHYQKYFAETIYMNILLQ 529
>Z47357-8|CAA87425.3| 601|Caenorhabditis elegans Hypothetical
protein ZK1128.6a protein.
Length = 601
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 284 SHYSKYFPSSINMQVLLQ 337
SHY KYF +I M +LLQ
Sbjct: 550 SHYQKYFAETIYMNILLQ 567
>U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical
protein T23B3.5 protein.
Length = 211
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 714 GGXPXPPPXKKXXXGGXPPPPP 779
GG PPP K G PPP P
Sbjct: 24 GGKKKPPPPKSASKMGPPPPAP 45
>AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical
protein E03H12.5 protein.
Length = 210
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 714 GGXPXPPPXKKXXXGGXPPPPP 779
GG PPP K G PPP P
Sbjct: 24 GGKKKPPPPKSASKMGPPPPAP 45
>Z93389-9|CAB07670.2| 391|Caenorhabditis elegans Hypothetical
protein T13F3.2 protein.
Length = 391
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/64 (25%), Positives = 32/64 (50%)
Frame = -3
Query: 219 MHHSKNFLNNITCNFHIHLSCKQYMNNTDNK**AEKHVKIISIIKQFDVLLFSRHFIIDK 40
+ H + + N + + H H Y N+ + A++ +K+++I+K L + H IID
Sbjct: 326 LRHGEQYTNQLASDLHNH-----YKNDLHLEQYAQRVLKMMAIVKSLQKHLMNIHKIIDY 380
Query: 39 S*GF 28
+ F
Sbjct: 381 ADNF 384
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 778 GGGGGXPPXXXFFXGGGXGXPPXXGGXXPPP 686
GGGGG + GGG G G PPP
Sbjct: 38 GGGGGCGGGCGYGGGGGCGYGGGYGCGIPPP 68
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 707 PXGGXXXPPPXKKXPXXGGAPPPP 778
P GG PPP P PPPP
Sbjct: 42 PCGGGFGPPPPPFGPVGYALPPPP 65
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 4/28 (14%)
Frame = +3
Query: 702 PPXXGGXPX----PPPXKKXXXGGXPPP 773
PP GG P PPP GG PPP
Sbjct: 1586 PPLMGGPPPRLGMPPPGPPPPNGGPPPP 1613
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,205,269
Number of Sequences: 27780
Number of extensions: 315836
Number of successful extensions: 2628
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1619
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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