Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_N19
         (791 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       25   0.81 
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    24   1.4  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    24   1.4  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       24   1.4  
AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase pro...    23   2.5  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    23   4.3  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   5.7  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   5.7  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    22   7.5  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    22   7.5  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    22   7.5  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   7.5  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   7.5  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 25.0 bits (52), Expect = 0.81
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = +3

Query: 690 GGXXPPXXGGXPXPPPXKKXXXGGXPPPP 776
           GG  PP   G P PP        G PP P
Sbjct: 406 GGQLPPS-AGAPMPPIPNMSNMSGMPPLP 433



 Score = 25.0 bits (52), Expect = 0.81
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = +1

Query: 691 GGXXPPXXGGXPXPPPKKKXXXGGXPPPP 777
           GG  PP   G P PP        G PP P
Sbjct: 406 GGQLPPS-AGAPMPPIPNMSNMSGMPPLP 433


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/36 (27%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = +2

Query: 56  CLEKSRTS--NCLIIEIIFTCFSAYYLLSVLFIYCL 157
           C  K+ T   +CL ++++F    +YYL+ +    C+
Sbjct: 219 CNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCM 254


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/36 (27%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = +2

Query: 56  CLEKSRTS--NCLIIEIIFTCFSAYYLLSVLFIYCL 157
           C  K+ T   +CL ++++F    +YYL+ +    C+
Sbjct: 219 CNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCM 254


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = +2

Query: 86  LIIEIIFTCFSAYYLLSVLF 145
           +II + F C++ YY++S+ +
Sbjct: 264 IIIAVFFICWTPYYVMSLWY 283


>AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase
           protein.
          Length = 85

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 266 ALLRNRSHYSKYFPSSINMQVLLQ 337
           +L+    HYSK+FP S  +  L++
Sbjct: 48  SLIGANEHYSKFFPVSEILSFLIE 71


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +2

Query: 62  EKSRTSNCLIIEIIFTCFSAYYLLSV 139
           E+    +CL +++IFT   A+Y  +V
Sbjct: 282 EEQGNYSCLKVDLIFTRDRAFYFTTV 307


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 14/30 (46%), Positives = 14/30 (46%)
 Frame = +2

Query: 290 YSKYFPSSINMQVLLQLGYSNEWXNKKILS 379
           Y K   S    QVL  LGYSN   N  I S
Sbjct: 297 YCKTCISGRAFQVLTWLGYSNSAFNPIIYS 326


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 299 IYYNVICYVKVHXSYVD 249
           +Y++++C  K H S  D
Sbjct: 10  LYFSIVCQAKAHYSLRD 26


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 80  NCLIIEIIFTCFSAYYLLSV 139
           +CL +++IFT   A+Y  +V
Sbjct: 257 SCLKVDLIFTRDRAFYFTTV 276


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 80  NCLIIEIIFTCFSAYYLLSV 139
           +CL +++IFT   A+Y  +V
Sbjct: 308 SCLKVDLIFTRDRAFYFTTV 327


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 80  NCLIIEIIFTCFSAYYLLSV 139
           +CL +++IFT   A+Y  +V
Sbjct: 257 SCLKVDLIFTRDRAFYFTTV 276


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 379 GQYFFIXPFIGIAKL 335
           G YFFI P I  A+L
Sbjct: 452 GDYFFICPSIHFAQL 466


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 379 GQYFFIXPFIGIAKL 335
           G YFFI P I  A+L
Sbjct: 452 GDYFFICPSIHFAQL 466


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,256
Number of Sequences: 438
Number of extensions: 4745
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)